cluster # 5796

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5796 cluster # 5796 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5796#0 length = 758 sequences # 3

consensusID : consensus_5796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 758
fasta sequence

                              [GGATATAC-AGATTTCGATCGGC-GACGTTAGTGATCAGCTGGGTTAATTAATTAC-GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC-TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC-GGCTTCGCC-G-CCGGCGCGCAGCC-GGTGGT-GGTGC-GCGGCGGC-GC-GCAC-GACCGC-GTGTTCGAGTGCAAGACGTGCAACC-GGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCCGCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGGGCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAACGACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGACGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCGGAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGATTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG]

[+] EMBL BI798672             [GGATATACAAGATTTCGATCGGCAGACGTTAGTGATCAGCTGGGTTAATTAATTACAGTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGCAGGCTTCGCCAGACCGGCGCGCAGCCAGGTGGTCGGTGCAGCGGCGGCAGCAGCACAGACCGCAGTGTTCGAGTGCAAGACGTGCAACCAGGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGA GCAGCCG                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI798998             [GGATATAC AGATTTCGATCGGC GACGTTAGTGATCAGCTGGGTTAATTAATTAC GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGCATCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC GGCTTCGCC G CCGGCGCGCAGCC GGTGGT GGTGC  CGGCGGC GC GCAC GACCGC GTGTTCGAGTGCAAGACGTGCAACC GGCAGTTCCCAACGTTCCAGGCGCTC GGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGC GCGGCGCCGGCCCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGA                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AY266289             [                 ATCGGC GACGTTAGTGATCAGCTGGGTTAATTAATTAC GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGACCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC GGCTTCGCC G CCGGCGCGCAGCC GGTGGT GGTGC GCGGCGGC GC GCAC GACCGC GTGTTCGAGTGCAAGACGTGCAACC GGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCCGCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGGGCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAACGACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGACGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCGGAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGATTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG]




>consensus_5796#0
GGATATACAGATTTCGATCGGCGACGTTAGTGATCAGCTGGGTTAATTAATTACGTGGCT
AATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTT
CGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGCTCCTCGCGCAGCAGAGCCAGCACGG
CCTGCTGGGCGGCGGCGGCTTCGCCGCCGGCGCGCAGCCGGTGGTGGTGCGCGGCGGCGC
GCACGACCGCGTGTTCGAGTGCAAGACGTGCAACCGGCAGTTCCCAACGTTCCAGGCGCT
CGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGG
CGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCC
GCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGG
GCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAAC
GACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGA
CGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCG
GAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGA
TTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG

clustalw multiple alignements is not computed in this case