These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 781 fasta sequence [AAAAAACTCCCAAAGATGGACTTAGGGTGGGTCAAAATGGATTCTCATGTTTAACATGTCTCGTCTTCTATGACATATATGGCCCTGGTTTGATGTTTGAAGAATATGCAATGCCAAAGCTCGAAAAGCTTTACCTTGGATTAAGCGCATATTCCGCATATAATGCATATGGAGGTTTTGGACTTGGAATCCGACACCTCTCCTCTCTCAATCTGTACTCTATTTCCGTTGGAATTGAACGCAAATGTAAATATGTTCCAGAGA-CGAAGGCTGCTGCAATGTCTATTATCAACAACGAATTCAAGTCGCTTCCTCACCCACCCAAGGTTGAATTCACAATAATCCATGTATATGGGGATCTTGTTGAGGAGTCTGAACTAGAGACCGACTTTTCGATCTTATCTAAAATCATCAAGGCTAGGCTCAGTTCTCCTCTTCAAGATTATAAAGGATACA-GTGGGAGCCCTTCCACAAGCAATGAAGCA-AATAGCATGAACTGAGAATAACA-CCGCAGAAAC-AAGCTGTGTATACATGCACCCAAGCCCGAACCTGCTGTCCAAATTCCTGTCATCTTCAAAATGTTATTTTCCTTCAGAAC-ATTCCTATGCAAACTTCGCAAAGTTAACGAGGCAATATTTAACAGTAGATTATAGCCAGATTTCAGTAGTAGATGTTTTTCAGCTATATATGTTTTTTTAGTGCAAACAGTAGCTAAGGATCCTACCGTGTGTTTTTGTGCATATAAATAAATAACAAAGGTGCAAATGTTCCAGATAAAAAA] [+] EMBL CF303529 [AAAAAACTCCCAAAGATGGACTTAGGGTGGGTCAAAATGGATTCTCATGTTTAACATGTCTCGTCTTCTATGACATATATGGCCCTGGTTTGATGTTTGAAGAATATGCAATGCCAAAGCTCGAAAAGCTTTACCTTGGATTAAGCGCATATTCCGCATATAATGCATATGGAGGTTTTGGACTTGGAATCCGACACCTCTCCTCTCTCAATCTGTACTCTATTTCCGTTGGAATTGAACGCAAATGTAAATATGTTCCAGAGA CGAAGGCTGCTGCAATGTCTATTATCAACAACGAATTCAAGTCGCTTCCTCACCCACCCAAGGTTGAATTCACAATAATCCATGTATATGGGGATCTTGTTGAGGAGTCTGAACTAGAGACCGACTTTTCGATCTTATCTAAAATCATCAAGGCTAGGCTCAGTTCTCCTCTTCAAGATTATAAAGGATACA GTGGGAGCCCTTCCACAAGCAATGAAGCA NATAGCATGAACTGAGAATAACA CCGCAGAAACAAAGCTGTGTATACATGCACCCAAGCCCGAACCTGCTGTCCAAATTCC ] [+] EMBL BM419650 [ tTGTTCCAGAGACCGAAGGCTGCTGCAATGTCTATTATCAACAACGAATTCAAGTCGCTTCCTCACCCACCCAAGGTTGAATTCACAATAATCCATGTATATGGGGATCTTGTTGAGGAGTCTGAACTAGAGACCGACTTTTCGATCTTATCTAAAATCATCAAGGCTAGGCTCAGTTCTCCTCTTCAAGATTATAAAGGATACA GTGGGAGCCCTTCCACAAGCAATGAAGCA AATAGCATGAACTGAGAATAACA CCGCAGAAAC AAGCTGTGTATACATGCACCCAAGCCCGAACCTGCTGTCCAAATTCCTGTCATCTTCAAAATGTTATTTTCCTTCAGAAC ATTCCTATGCAAACTTCGCAAAGTTAACGAGGCAATATTTAACAGTAGATTATAGCCAGATTTCAGTAGTAGATGTTTTTCAGCTATATATGTTTTTTTAGTGCAAACAGTAGCTAAGGATCCTACCGTGTGTTTTTGTGCATATAAATAAATAACAAAGGTGCAAATGTTCCAGATAAAAAA] [+] EMBL BM420059 [ caAATGTCTATTATCAACAACGAATTCAAGTCGCTTCCTCACCCACCCAAGGTTGAATTCAC ATAATCCATGTATATGGGGATCTTGTTGAGGAGTCTGAACTAGAGACCGACTTTTCGATCTTATCTAAAATCATCAAGGCTAGGCTCAGTTCTCCTCTTCAAGATTATAAAGGATACACGTGGGAGCCCTTCCACAAGCNATGAAGCACAATAGCATGAACTGAGAATAACACCCGCAGAAAC AAGCTGTGTATACATGCACCCAAGCCCGAACCTGCTGTCCAAATTCCTGTCATCTTCAAAATGTTATTTTCCTTCAGAACAATTCCTAT CCAACTTCGCAAAGTTAACGA GCAATATTTAACAGTAGATTATAGCCAGATTTCAGTAGTAGATGTTTTTCAGCTATATATGTTTTTTTAGTCCAAACAGTAGCTAAGGATCCTACCGTGTGTTTTTGTGCATATAAATAAATAACAAAGGTGC AATGTTCCAGATAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||