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Oryza sativa
cluster # 5836 cluster # 5836       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5836#0 length = 1838 sequences # 1  
consensus_5836#1 length = 1543 sequences # 2  

consensusID : consensus_5836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1838
fasta sequence
                              [GTGAAATTACATATTTGCCCTGGGCCTTCTCCTCTCAACGCGTGAGTCGCCGCCGCGAGCCCGCGACGGAAGAAAGAGGCGGAAACGCCGCCACCCCCAACGCCGGAAACGCCGGCCGCTACGCCCAGCCGCCGGGGCTCACCTCCAAGATGCCGCCGCCACCCGTACTCGCTGGAACCGTCGCCGCCACCCCTCTTTGCCGGAGCCGCCGGCGCTCTCTCCCGACGCCGCTACTCATAATTGGGCACCCCAGGCCTGAGACCCAGCAGAATCTTTGGACAAAATTTTACAACACTTGTAGTTCAGGCACGCTGCAACTGCTGCATCTGCCAAATTGTGCTTATCCTGTGCAAGAAATAGCTATAGATTGACTCGGCCGGGCAGTAGTACACTAGTTTATCAAATTTCAACGTCCAATCTTCTGTGAAAAGAAGATTCAGACCATCATCTGCCAGAAGAAGTGCATTCATTATCTAATGCAACAGGACAGTAACTCCTGAGCTATGCAAACAAGTGAGTTATATAATGCTCAGACAGACAAAGATCATCTTATGTTGAATTTGGCTCAGTAATTTTCAGTGGGCAGATATGCTCGGACAGACAAAGAAAGGCTGACAGTGTCTTCAGACTTGTTCAGTTGCAGTTCAACTGGAAGAGTATGTATTGAGTGTACTCAGTTCTTGAGTTTCATTTTATTTACAAAATCTGAATTAATCCTTCAGTAGAAACCATGTTTGCCGCTGGGCTGCTTGAACCTTCCTGGCTTCATCTCCTAGTAGAGCAATATTTTGTGCGTCATTGCTGTGAGGTGATAATAGGACTAAAAAGTGACAATATGGTCAGATTTTGTGAGGTGATAATAGGCCTGAAAAGTGACAATATGGTCAGATTTTGTGCATGTTGAAATTCAGATTTTGTGATAATGTTGGAGAGGAAGAATCCAAGAGCAATTAGGATGTGACTTTCAGACCTACATTCAGATTTTGTAATAGTACTGTTCATTTTTAAATCTTGAATTTACTTCAGTTTTTTTGTCCCCTTAGCAGAATTTATGACAGTTCTTATGAATTCAGCATTTCACTGTGAATTCGCAGGACAGTAGTAGCACTCCTTGCTGAAACCTTAGGTTACAGCTTCATCAAAGCAGACAACTACCATTCTCAGGCAAACAAAGCAAAGATGAGCAAGGGCATCCACTGTGTGCTGGATGAATCATGCCAAAAACCTTATTTATAAGCCACAGACAAGTGCAGCAGCTAAGCTAGCTCACCTTCCTCTTCACCACCAAGAACGCAAGAACGCAGCGAGAGAGGAGGAGATTCAAGAACCGGAGGAATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCCGACGACGGAGGTGGAGGACATGGGACGAGATGGTGGCGTCCGTCTCCATCCACTACTTCATCTGCCACATGTGCCGCCACGCCGCCGCCCGGGGCTCGTCGGCCTTCTCCGCCGCGTCGTCGGCGTCTTCCTCTGCTGCGCCGGTGCTTCCCGTCGTGGTGCGTCCCGCGTTGGTGGAGCACGCGGCGGACATGGAGCGGCTCATCTCGCAGCTGCCACTCTTCACGCTAGCGTCGTCGTTGGCGGCGCTCCCGAAGTCGTCCCGCGCCTGCTGCCGCCATCCCCTGCTTCTCCACGCCGTCTCCGGCGAGGAAGGTGACTGTCGCCGTCGAACAGAGGGGTAAAGATGGAAACGGTTTTTCTGATTGTACTGCAGCGTCAAACATTTAGACTCCTTTTAAAATGAACTACAACGTCAAACAAAACGGGACGGAGGGAG]

[+] EMBL AK107016             [GTGAAATTACATATTTGCCCTGGGCCTTCTCCTCTCAACGCGTGAGTCGCCGCCGCGAGCCCGCGACGGAAGAAAGAGGCGGAAACGCCGCCACCCCCAACGCCGGAAACGCCGGCCGCTACGCCCAGCCGCCGGGGCTCACCTCCAAGATGCCGCCGCCACCCGTACTCGCTGGAACCGTCGCCGCCACCCCTCTTTGCCGGAGCCGCCGGCGCTCTCTCCCGACGCCGCTACTCATAATTGGGCACCCCAGGCCTGAGACCCAGCAGAATCTTTGGACAAAATTTTACAACACTTGTAGTTCAGGCACGCTGCAACTGCTGCATCTGCCAAATTGTGCTTATCCTGTGCAAGAAATAGCTATAGATTGACTCGGCCGGGCAGTAGTACACTAGTTTATCAAATTTCAACGTCCAATCTTCTGTGAAAAGAAGATTCAGACCATCATCTGCCAGAAGAAGTGCATTCATTATCTAATGCAACAGGACAGTAACTCCTGAGCTATGCAAACAAGTGAGTTATATAATGCTCAGACAGACAAAGATCATCTTATGTTGAATTTGGCTCAGTAATTTTCAGTGGGCAGATATGCTCGGACAGACAAAGAAAGGCTGACAGTGTCTTCAGACTTGTTCAGTTGCAGTTCAACTGGAAGAGTATGTATTGAGTGTACTCAGTTCTTGAGTTTCATTTTATTTACAAAATCTGAATTAATCCTTCAGTAGAAACCATGTTTGCCGCTGGGCTGCTTGAACCTTCCTGGCTTCATCTCCTAGTAGAGCAATATTTTGTGCGTCATTGCTGTGAGGTGATAATAGGACTAAAAAGTGACAATATGGTCAGATTTTGTGAGGTGATAATAGGCCTGAAAAGTGACAATATGGTCAGATTTTGTGCATGTTGAAATTCAGATTTTGTGATAATGTTGGAGAGGAAGAATCCAAGAGCAATTAGGATGTGACTTTCAGACCTACATTCAGATTTTGTAATAGTACTGTTCATTTTTAAATCTTGAATTTACTTCAGTTTTTTTGTCCCCTTAGCAGAATTTATGACAGTTCTTATGAATTCAGCATTTCACTGTGAATTCGCAGGACAGTAGTAGCACTCCTTGCTGAAACCTTAGGTTACAGCTTCATCAAAGCAGACAACTACCATTCTCAGGCAAACAAAGCAAAGATGAGCAAGGGCATCCACTGTGTGCTGGATGAATCATGCCAAAAACCTTATTTATAAGCCACAGACAAGTGCAGCAGCTAAGCTAGCTCACCTTCCTCTTCACCACCAAGAACGCAAGAACGCAGCGAGAGAGGAGGAGATTCAAGAACCGGAGGAATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCCGACGACGGAGGTGGAGGACATGGGACGAGATGGTGGCGTCCGTCTCCATCCACTACTTCATCTGCCACATGTGCCGCCACGCCGCCGCCCGGGGCTCGTCGGCCTTCTCCGCCGCGTCGTCGGCGTCTTCCTCTGCTGCGCCGGTGCTTCCCGTCGTGGTGCGTCCCGCGTTGGTGGAGCACGCGGCGGACATGGAGCGGCTCATCTCGCAGCTGCCACTCTTCACGCTAGCGTCGTCGTTGGCGGCGCTCCCGAAGTCGTCCCGCGCCTGCTGCCGCCATCCCCTGCTTCTCCACGCCGTCTCCGGCGAGGAAGGTGACTGTCGCCGTCGAACAGAGGGGTAAAGATGGAAACGGTTTTTCTGATTGTACTGCAGCGTCAAACATTTAGACTCCTTTTAAAATGAACTACAACGTCAAACAAAACGGGACGGAGGGAG]


>consensus_5836#0 GTGAAATTACATATTTGCCCTGGGCCTTCTCCTCTCAACGCGTGAGTCGCCGCCGCGAGC CCGCGACGGAAGAAAGAGGCGGAAACGCCGCCACCCCCAACGCCGGAAACGCCGGCCGCT ACGCCCAGCCGCCGGGGCTCACCTCCAAGATGCCGCCGCCACCCGTACTCGCTGGAACCG TCGCCGCCACCCCTCTTTGCCGGAGCCGCCGGCGCTCTCTCCCGACGCCGCTACTCATAA TTGGGCACCCCAGGCCTGAGACCCAGCAGAATCTTTGGACAAAATTTTACAACACTTGTA GTTCAGGCACGCTGCAACTGCTGCATCTGCCAAATTGTGCTTATCCTGTGCAAGAAATAG CTATAGATTGACTCGGCCGGGCAGTAGTACACTAGTTTATCAAATTTCAACGTCCAATCT TCTGTGAAAAGAAGATTCAGACCATCATCTGCCAGAAGAAGTGCATTCATTATCTAATGC AACAGGACAGTAACTCCTGAGCTATGCAAACAAGTGAGTTATATAATGCTCAGACAGACA AAGATCATCTTATGTTGAATTTGGCTCAGTAATTTTCAGTGGGCAGATATGCTCGGACAG ACAAAGAAAGGCTGACAGTGTCTTCAGACTTGTTCAGTTGCAGTTCAACTGGAAGAGTAT GTATTGAGTGTACTCAGTTCTTGAGTTTCATTTTATTTACAAAATCTGAATTAATCCTTC AGTAGAAACCATGTTTGCCGCTGGGCTGCTTGAACCTTCCTGGCTTCATCTCCTAGTAGA GCAATATTTTGTGCGTCATTGCTGTGAGGTGATAATAGGACTAAAAAGTGACAATATGGT CAGATTTTGTGAGGTGATAATAGGCCTGAAAAGTGACAATATGGTCAGATTTTGTGCATG TTGAAATTCAGATTTTGTGATAATGTTGGAGAGGAAGAATCCAAGAGCAATTAGGATGTG ACTTTCAGACCTACATTCAGATTTTGTAATAGTACTGTTCATTTTTAAATCTTGAATTTA CTTCAGTTTTTTTGTCCCCTTAGCAGAATTTATGACAGTTCTTATGAATTCAGCATTTCA CTGTGAATTCGCAGGACAGTAGTAGCACTCCTTGCTGAAACCTTAGGTTACAGCTTCATC AAAGCAGACAACTACCATTCTCAGGCAAACAAAGCAAAGATGAGCAAGGGCATCCACTGT GTGCTGGATGAATCATGCCAAAAACCTTATTTATAAGCCACAGACAAGTGCAGCAGCTAA GCTAGCTCACCTTCCTCTTCACCACCAAGAACGCAAGAACGCAGCGAGAGAGGAGGAGAT TCAAGAACCGGAGGAATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAG GAGGGTGCCGATGGTGGCCGACGACGGAGGTGGAGGACATGGGACGAGATGGTGGCGTCC GTCTCCATCCACTACTTCATCTGCCACATGTGCCGCCACGCCGCCGCCCGGGGCTCGTCG GCCTTCTCCGCCGCGTCGTCGGCGTCTTCCTCTGCTGCGCCGGTGCTTCCCGTCGTGGTG CGTCCCGCGTTGGTGGAGCACGCGGCGGACATGGAGCGGCTCATCTCGCAGCTGCCACTC TTCACGCTAGCGTCGTCGTTGGCGGCGCTCCCGAAGTCGTCCCGCGCCTGCTGCCGCCAT CCCCTGCTTCTCCACGCCGTCTCCGGCGAGGAAGGTGACTGTCGCCGTCGAACAGAGGGG TAAAGATGGAAACGGTTTTTCTGATTGTACTGCAGCGTCAAACATTTAGACTCCTTTTAA AATGAACTACAACGTCAAACAAAACGGGACGGAGGGAG



consensusID : consensus_5836#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1543
fasta sequence
                              [TCCTCCTCACCGCCAAGATCGCAAGAACGCAACAAGAGAGGAGGAGATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCTGTGCCGGTGGTGGCCGACGATGGAGGCGGAGGGCATGGGGCGAAGGGGGAGGAGAGTGTGAGCGGGAGCGTCGCGGGCATTTCGCCGAGCATCCTCATCATCGCCGTCATCGTCGTGGTGATGCTCCTCGCCTCCGTCTCCATCCACTACTTCATCCGCCACCTGTGCCGCCGCTCGTCGGCGTCGGCGGCCGCGTCGTCCTCCGCGCCGGTGCTCCCCGTCGTGGTGCGCCCCGCGTCGTCGGCGGCCGTGGGGGAGCAGGTGGTGGGGAAGGCGTCGGCGGAGCGCGCGGCGGAGATGGAGCGGCTCATCTCGCGGCTGCCGCTGTTCACGCTGGCGTCGTCGCTGGCGGCGCTCCCCAAGTCGTCGCGCGACTGCGCCGTGTGCCAGAGCGCGTTCCGCGACGACGACGAGCTCCGCCTCCTCCCGGCGTGCCGCCACGCGTTCCACTCCCGCTGCGTCGACCCGTGGCTCCGCGCCAACCCCTCCTGCCCGCTCTGCCGCGCCTCCATCGCGCTCCCGCACCCGCCCCTCCCGGACCTCCTCCGCGTCGAGCTCGGCAGCGTCAGCAGCCGCCGCTCCAACCCCAACTCCGCCGCCGCCGTCGCCAGCGCGCCGCCCGAGGGCGCCGCCGTCCGCGCCTACCCGCTCCCCACCCTCCCCAACTCCGAGTACCTCGTCGAGGAGGAGCTCGAGGTCGTCATCAAGCAACCCGCCGCCGCCGCTGCGCCAAGAACCGGCGAGCCAAGCCAGCATCCGCTGCCGGCGGCGCAGGCGGAGCGTGGGCAGCCGTCGTCGGTGACCCCGACGGCGTCGTTCAGCTCGGCGAGGTCGCAGGAGCGGTGGAGCAACAGGTGGAGCAGCAGATGGAGCAGCCGGTGGAGCAGCGGGCGGTGGAGCAGCCGGTACGACGCCGGCACGGTGACGGCGGCCGCCACGGCGGAGTGGTGGTGGGACATGGACGGCGGCGCGGCGCCCGCCGCGCGGCGGCGCGAGGTGGAGGAGCAGGGCAACGCGTTCCACGGCTTCATGCGCTGGCTCACAGGGGCATACTAGTAATTTACCACTCGATCAATGCCCAGTTCACTCGCTCGTCAACCTCGCCGGCGCCGGCGATCGCCGGAGAATTGAATTCAACTGAATTTGAAATGAATTATGAATTTCTGATGCGGCTCGGCTCTGCTTTTGGGCATTCGTGATTAGGAGTAATTAATAGTGTCTCCTTTTCTCTTTTTTTTGGCTGTGAATTCTTGTATTATTTTTTTCTTGAGTGCGTGGATTTCGAGGGTGGAGGATGCATATGGTGGGAAGGTTTTTGATGCCGTACGGATTTGAAAACTGCTTCTTCCTCCGAATTGGAGAATGTCGGCGGGAAGATTGAGGAATTCGGGGACTTTGAGGCAAATGAACTGAACTGCCCAATAAAAAAACAG]

[+] EMBL AK109895             [TCCTCCTCACCGCCAAGATCGCAAGAACGCAACAAGAGAGGAGGAGATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCTGTGCCGGTGGTGGCCGACGATGGAGGCGGAGGGCATGGGGCGAAGGGGGAGGAGAGTGTGAGCGGGAGCGTCGCGGGCATTTCGCCGAGCATCCTCATCATCGCCGTCATCGTCGTGGTGATGCTCCTCGCCTCCGTCTCCATCCACTACTTCATCCGCCACCTGTGCCGCCGCTCGTCGGCGTCGGCGGCCGCGTCGTCCTCCGCGCCGGTGCTCCCCGTCGTGGTGCGCCCCGCGTCGTCGGCGGCCGTGGGGGAGCAGGTGGTGGGGAAGGCGTCGGCGGAGCGCGCGGCGGAGATGGAGCGGCTCATCTCGCGGCTGCCGCTGTTCACGCTGGCGTCGTCGCTGGCGGCGCTCCCCAAGTCGTCGCGCGACTGCGCCGTGTGCCAGAGCGCGTTCCGCGACGACGACGAGCTCCGCCTCCTCCCGGCGTGCCGCCACGCGTTCCACTCCCGCTGCGTCGACCCGTGGCTCCGCGCCAACCCCTCCTGCCCGCTCTGCCGCGCCTCCATCGCGCTCCCGCACCCGCCCCTCCCGGACCTCCTCCGCGTCGAGCTCGGCAGCGTCAGCAGCCGCCGCTCCAACCCCAACTCCGCCGCCGCCGTCGCCAGCGCGCCGCCCGAGGGCGCCGCCGTCCGCGCCTACCCGCTCCCCACCCTCCCCAACTCCGAGTACCTCGTCGAGGAGGAGCTCGAGGTCGTCATCAAGCAACCCGCCGCCGCCGCTGCGCCAAGAACCGGCGAGCCAAGCCAGCATCCGCTGCCGGCGGCGCAGGCGGAGCGTGGGCAGCCGTCGTCGGTGACCCCGACGGCGTCGTTCAGCTCGGCGAGGTCGCAGGAGCGGTGGAGCAACAGGTGGAGCAGCAGATGGAGCAGCCGGTGGAGCAGCGGGCGGTGGAGCAGCCGGTACGACGCCGGCACGGTGACGGCGGCCGCCACGGCGGAGTGGTGGTGGGACATGGACGGCGGCGCGGCGCCCGCCGCGCGGCGGCGCGAGGTGGAGGAGCAGGGCAACGCGTTCCACGGCTTCATGCGCTGGCTCACAGGGGCATACTAGTAATTTACCACTCGATCAATGCCCAGTTCACTCGCTCGTCAACCTCGCCGGCGCCGGCGATCGCCGGAGAATTGAATTCAACTGAATTTGAAATGAATTATGAATTTCTGATGCGGCTCGGCTCTGCTTTTGGGCATTCGTGATTAGGAGTAATTAATAGTGTCTCCTTTTCTCTTTTTTTTGGCTGTGAATTCTTGTATTATTTTTTTCTTGAGTGCGTGGATTTCGAGGGTGGAGGATGCATATGGTGGGAAGGTTTTTGATGCCGTACGGATTTGAAAACTGCTTCTTCCTCCGAATTGGAGAATGTCGGCGGGAAGATTGAGGAATTCGGGGACTTTGAGGCAAATGAACTGAACTGCCCAATAAAAAAACAG]
[+] EMBL CB658618             [                    GCAAGAACGCAACAAGAGAGGAGGAGATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCTGTGCCGGTGGTGGCCGACGATGGAGGCGGAGGGCATGGGGCGAAGGGGGAGGAGAGTGTGAGCGGGAGCGTCGCGGGCATTTCGCCGAGCATCCTCATCATCGCCGTCATCGTCGTGGTGATGCTCCTCGCCTCCGTCTCCATCCACTACTTCATCCGCCACCTGTGCCGCCGCTCGTCGGCGTCGGCGGCCGCGTCGTCCTCCGCGCCGGTGCTCCCCGTCGTGGTGCGCCCCGCGTCGTCGGCGGCCGTGGGGGAGCAGGTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_5836#1 TCCTCCTCACCGCCAAGATCGCAAGAACGCAACAAGAGAGGAGGAGATTGATGTCGTCTT CGGCTGTGATTCCGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCTGTGCCGGTGG TGGCCGACGATGGAGGCGGAGGGCATGGGGCGAAGGGGGAGGAGAGTGTGAGCGGGAGCG TCGCGGGCATTTCGCCGAGCATCCTCATCATCGCCGTCATCGTCGTGGTGATGCTCCTCG CCTCCGTCTCCATCCACTACTTCATCCGCCACCTGTGCCGCCGCTCGTCGGCGTCGGCGG CCGCGTCGTCCTCCGCGCCGGTGCTCCCCGTCGTGGTGCGCCCCGCGTCGTCGGCGGCCG TGGGGGAGCAGGTGGTGGGGAAGGCGTCGGCGGAGCGCGCGGCGGAGATGGAGCGGCTCA TCTCGCGGCTGCCGCTGTTCACGCTGGCGTCGTCGCTGGCGGCGCTCCCCAAGTCGTCGC GCGACTGCGCCGTGTGCCAGAGCGCGTTCCGCGACGACGACGAGCTCCGCCTCCTCCCGG CGTGCCGCCACGCGTTCCACTCCCGCTGCGTCGACCCGTGGCTCCGCGCCAACCCCTCCT GCCCGCTCTGCCGCGCCTCCATCGCGCTCCCGCACCCGCCCCTCCCGGACCTCCTCCGCG TCGAGCTCGGCAGCGTCAGCAGCCGCCGCTCCAACCCCAACTCCGCCGCCGCCGTCGCCA GCGCGCCGCCCGAGGGCGCCGCCGTCCGCGCCTACCCGCTCCCCACCCTCCCCAACTCCG AGTACCTCGTCGAGGAGGAGCTCGAGGTCGTCATCAAGCAACCCGCCGCCGCCGCTGCGC CAAGAACCGGCGAGCCAAGCCAGCATCCGCTGCCGGCGGCGCAGGCGGAGCGTGGGCAGC CGTCGTCGGTGACCCCGACGGCGTCGTTCAGCTCGGCGAGGTCGCAGGAGCGGTGGAGCA ACAGGTGGAGCAGCAGATGGAGCAGCCGGTGGAGCAGCGGGCGGTGGAGCAGCCGGTACG ACGCCGGCACGGTGACGGCGGCCGCCACGGCGGAGTGGTGGTGGGACATGGACGGCGGCG CGGCGCCCGCCGCGCGGCGGCGCGAGGTGGAGGAGCAGGGCAACGCGTTCCACGGCTTCA TGCGCTGGCTCACAGGGGCATACTAGTAATTTACCACTCGATCAATGCCCAGTTCACTCG CTCGTCAACCTCGCCGGCGCCGGCGATCGCCGGAGAATTGAATTCAACTGAATTTGAAAT GAATTATGAATTTCTGATGCGGCTCGGCTCTGCTTTTGGGCATTCGTGATTAGGAGTAAT TAATAGTGTCTCCTTTTCTCTTTTTTTTGGCTGTGAATTCTTGTATTATTTTTTTCTTGA GTGCGTGGATTTCGAGGGTGGAGGATGCATATGGTGGGAAGGTTTTTGATGCCGTACGGA TTTGAAAACTGCTTCTTCCTCCGAATTGGAGAATGTCGGCGGGAAGATTGAGGAATTCGG GGACTTTGAGGCAAATGAACTGAACTGCCCAATAAAAAAACAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5836#0      GTGAAATTACATATTTGCCCTGGGCCTTCTCCTCTCAACGCGTGAGTCGCCGCCGCGAGC 60
consensus_5836#1      ------------------------------------------------------------
                                                                                  

consensus_5836#0      CCGCGACGGAAGAAAGAGGCGGAAACGCCGCCACCCCCAACGCCGGAAACGCCGGCCGCT 120
consensus_5836#1      ------------------------------------------------------------
                                                                                  

consensus_5836#0      ACGCCCAGCCGCCGGGGCTCACCTCCAAGATGCCGCCGCCACCCGTACTCGCTGGAACCG 180
consensus_5836#1      ------------------------------------------------------------
                                                                                  

consensus_5836#0      TCGCCGCCACCCCTCTTTGCCGGAGCCGCCGGCGCTCTCTCCCGACGCCGCTACTCATAA 240
consensus_5836#1      -----------------------------------TCCTCCTCACCGCCAAGA-TCGCAA 24
                                                         **   * *  ****   * **  **

consensus_5836#0      TTGGGCACCCCAGGCCTGAGAC-CCAGCAGAATCTTTGGACAAAATTTTACAACACTTGT 299
consensus_5836#1      GAACGCAACAAGAGAGGAGGAGATTGATGTCGTCTTCGGCTGTGATTCCGCCGCCGTCGC 84
                          *** *    *     **           **** **     ***   *  *  * * 

consensus_5836#0      AGTTCAGGCACGCTGCAACTGCTGCATCTGCCAAATTGTGCTTATCCTGTGCAAGAAATA 359
consensus_5836#1      CGGAGAGG-AGGGTGCCGATGGTGGCTGTGCCGG-TGGTGGCCGACG-ATGGAGGCGGAG 141
                       *   *** * * ***   ** **  * ****   * ***     *   ** * *     

consensus_5836#0      GCTATAGATTGACTCGGCCGGGCAGTA-GTACACTAGTTTATCAA--ATTTCAACGTCCA 416
consensus_5836#1      GGCATGGGGCGAAGGGGGAGGAGAGTGTGAGCGGGAGCGTCGCGGGCATTTCGCCGAGCA 201
                      *  ** *   **   **  **  ***  *  *   **  *  *    *****  **  **

consensus_5836#0      ATCT--TCTGTGAAAAGAAGATTCAGACCATCATCTGCCAGAAGAAGTGCATTCATTATC 474
consensus_5836#1      TCCTCATCATCGCCGTCATCGTCGTGGTGATGCTCCTCGCCTCCGTCTCCATCCACTACT 261
                        **  **   *     *   *   *   **  **  *         * *** ** **  

consensus_5836#0      TAATGCAACAGGACAGTAACTCCTGAGCTATGCAAACAAGTGAGTTATATAATGCTCAGA 534
consensus_5836#1      TCATCCGCCACCTGTGCCGCCGCTCGTCGGCGTCGGCGGCCGCGTCGTCCTCCGCGCCGG 321
                      * ** *  **     *   *  **   *   *    *    * **  *     ** * * 

consensus_5836#0      CAGACAAAGATCATCTTATGTTGAATTTGGCTCAGTAATTTTCAGTGGGCAGATATGCTC 594
consensus_5836#1      TGCTCCCCG-TCGTGGTGCGCCCCGCGTCG-TCGGCGGCCGTGGGGGAGCAGGTG-GTGG 378
                          *   * ** *  *  *       * * ** *      *  * * **** *  *   

consensus_5836#0      GGACAGACAAAGAAAGGCTGACAGTGTCTTCAGACTTGTTCAGTTGCAGTTCAACTGGAA 654
consensus_5836#1      GGAAGGCGTCGGCGGAGCGCGCGGCGGAGATGGAGCGGCTCATCT----CGCGGCTGCCG 434
                      ***  *     *    **   * * *      **   * ***  *      *  ***   

consensus_5836#0      GAGTATGTATTGAGTGTACTCAGTTCTTGAGTTTCATTTTATTTACAAAATCTGAATTAA 714
consensus_5836#1      CTGTTCACGCTG-GCGTCGTCGCTGGCGGCGCTCC----------CCAAGTC-------G 476
                        **      ** * **  **  *    * * * *          * ** **        

consensus_5836#0      TCCTTCAGTAGAAACCATGTTTGCCGCTGGGCTGCTTGAACCTTCCTGGCTTCATCTCCT 774
consensus_5836#1      TCGCGCGACTGCG-CCGTGTGCCAGAGCGCGTTCCGCGACGACGACGAGCTCCGCCTCCT 535
                      **   *    *   ** ***        * * * *  **      *  *** *  *****

consensus_5836#0      AGTAGAGCAATATTTTGTGCGTCATTGCTGTGAGGTGATAATAGGACTAAAAAGTGACAA 834
consensus_5836#1      CCCGGCGTGCCGCCACGCGTTCCACTCCCGCTGCGTCGACCCGTGGCTCCGCGCCAACCC 595
                          * *         * *   ** * * *    **        * **        **  

consensus_5836#0      TATGGTCAGATTTTGTGAGGTGATAATAGGCCTGAAAAGTGACAATATGGTCAGATTTTG 894
consensus_5836#1      CTCCTGCCCGCTCTGCCGCGCCTCCATCGCGCTCCCGCACC-CGCCCCTCCCGGACCTCC 654
                            *    * **    *     ** *  **         *        * **  *  

consensus_5836#0      TGCATGTTGAAATTCAGATTTTGTGATAATGTTGGAGAGGAAGAATCCAAGAGCAATTAG 954
consensus_5836#1      TCCGCGTCGAGCTC----------GGCAGCGTCAGCAGCCGCCGCTCCAACCCCAACTCC 704
                      * *  ** **  *           *  *  **  *          *****   *** *  

consensus_5836#0      GATGTGACTTTCAGACCTACATTCAGATTTTGTAATAGTACTGTTCATTTTTA---AATC 1011
consensus_5836#1      GCCGCCGCCGTC--GCCAGCGCGCCG-CCCGAGGGCGCCGCCGTCCGCGCCTACCCGCTC 761
                      *  *   *  **   **  *   * *              * ** *     **     **

consensus_5836#0      TTGAATTTACTTCAGTTTTTTTGTCCCCTTA--GCAGAATTTATGACAGTTCTTATGAAT 1069
consensus_5836#1      CCCACCCTCCCCAACTCCGAGTACCTCGTCGAGGAGGAGCTCGAGGTCGTCATCAAGCAA 821
                         *   * *   * *     *  * * *    *  **  *   *   **  * * * * 

consensus_5836#0      TCAGC-------ATTTCACTGTGAATTCGCAGGACAGTAGTAGCACTCCTTGCTGAAACC 1122
consensus_5836#1      CCCGCCGCCGCCGCTGCGCCAAGAACCGGCGAGCCAA-GCCAGCATCCGCTGCCGGCGGC 880
                       * **         * * *   ***   **  * **     ****  *  *** *    *

consensus_5836#0      TTAGGTTACAGCTTCATCAAAGCAGACAACTACCATTCTCAGGCAAACAAAGCAAAGATG 1182
consensus_5836#1      GCAGGC-GGAGCGT-----GGGCAGCCGTCGTCGGTGACCCCGACGGCGTCGTTCAGCTC 934
                        ***    *** *       **** *  *  *  *   *  *    *   *   ** * 

consensus_5836#0      AGCAAGGGCATCCACTGTGTGCTGGATGAATCATGCCAAAAACCTTATTTATAAGCCACA 1242
consensus_5836#1      GGCGAGGTCGCA---GGAGCGGTGGAGCAA-CAGGTGGAGCAGCAGATGGAGCAGCCG-- 988
                       ** *** *       * * * ****  ** ** *   *  * *  **  *  ****   

consensus_5836#0      GACAAGTGCAGCAGCTAAGCTAGCTCACCTTCCTCTTCACCACCAAGAACGCAAGAACG- 1301
consensus_5836#1      -----GTGGAGCAGC--GGGCGGTGGAGCAGCCGGTACGACGCCGGCACGGTGACGGCGG 1041
                           *** ******   *   *   * *  **  * *  * **   *  *  *   ** 

consensus_5836#0      CAGCGAGAGAGGAGGAGATTCAAGAACCGGAGGAATTGATGTCGTCTTCGGCTGTGATTC 1361
consensus_5836#1      CCGCCACGGCGGAGTGGTGGTGGGACATGGACGGCGGCGCGGCGCCCGCCGC-GCGGCGG 1100
                      * ** *  * ****  *      **   *** *       * ** *  * ** * *    

consensus_5836#0      CGCCGCCGTCGCCGGAGAGGAGGGTGCCGATGGTGGCCGACGACG-GAGGTGGAGGACAT 1420
consensus_5836#1      CGC----GAGGTGGAGGAGCAGGGCAACG-CGTTCCACGGCTTCATGCGCTGGCTCACA- 1154
                      ***    *  *  *  *** ****   **  * *   ** *  *  * * ***   *** 

consensus_5836#0      GGGACGAGATGGTGGCGTCCGTCTCCATCCACTACTTCATCTGCCACATGTGCCGCCACG 1480
consensus_5836#1      GGGGCATACTAGTAATTTACCACTCGATCAATGCCCAGTTCACTCGCTCGT-CAACCTCG 1213
                      *** *    * **    * *  *** *** *   *    **   * *  ** *  ** **

consensus_5836#0      CCGCCGCCCGGGGCTCGTCGG-----CCTTCTCCGCCGCGTCGTCGGCGTCTT-----CC 1530
consensus_5836#1      CCGGCGCC-GGCGATCGCCGGAGAATTGAATTCAACTGAATTTGAAATGAATTATGAATT 1272
                      *** **** ** * *** ***          **  * *  *       *  **       

consensus_5836#0      TCTGCTGCGCCGGTGCTTCCCGTCGTGGTGCGTCCCGCGTTGGTGGAGCACGCGGCGGAC 1590
consensus_5836#1      TCTGATGCGGCTCGGCTCTGCTTTTGGGCAT-TCGTGATTAGGAGTAATTAATAGTGTCT 1331
                      **** **** *   ***   * *   **    **  *  * ** * *       * *   

consensus_5836#0      ATGGAGCGGCTCATCTCGCAGCTGCCACTCTTCACGCTAGCGTCGTCGTTGG--CGGCGC 1648
consensus_5836#1      CCTTTTCTCTTTTTTTTG--GCTGTGAATTCTTGTATTATTTTTTTCTTGAGTGCGTGGA 1389
                            *   *  * * *  ****  * *  *     **   *  ** *  *  **  * 

consensus_5836#0      TCCCGAAGTCGTCCCGCGCCTGCTGCCGCCATCCCCTGCTTCTCCACGCCGTCTCCGGCG 1708
consensus_5836#1      TTTCGAGGGTGGAGGATGCATATGGTGGGAA------GGTTTTTGATGCCGTA--CGGAT 1441
                      *  *** *  *      ** *   *  *  *      * ** *  * *****   ***  

consensus_5836#0      AGGAAGGTGACTGTCGCCGTCGAACAGAGGGGTAAAGATGGAAACGGTTTTTCTGATTGT 1768
consensus_5836#1      TTGAAAACTGCTTCTTCCTCCGAATTGGAGAATGTCGGCGGGAA----------GATTG- 1490
                        ***     **    **  ****  *  *  *   *  ** **          ***** 

consensus_5836#0      ACTGCAGCGTCAAACATTTAGACTCCTTTTAAAATGAACTACAACGTCAAACAAAACGGG 1828
consensus_5836#1      ---AGGAATTCGGGGACTTTGAGGC------AAATGAACTGAACTGCCCAATAAAA--AA 1539
                               **    * ** **  *      *********  *  * * ** ****    

consensus_5836#0      ACGGAGGGAG 1838
consensus_5836#1      ACAG------ 1543
                      ** *      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)