These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5849#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 694 fasta sequence [CATGGCCAGAAACCCTAGCCTCCATCCCCTCCCGAGCCTTCGCCGCCGCAAGTAGATCTGAGACTCTCTGTTTTTTTTCCCCTTTTGTATCTGAATCTCTCTGAGCAATCCAGCAGGATCAGATCTGTAAGGTGTAGGAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTGGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGTTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA-CCTTGTTTAAACA-GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTACAAAATTGACGCCAATCACCTATAAACAGATTGTGAGCTTTTATCTTAGTAAAATAAAGTGTGACATTCTA] [+] EMBL CA764213 [CATGGCCAGAAACCCTAGCCTCCATCCCCTCCCGAGCCTTCGCCGCCGCAAGTAGATCTGAGACTCTCTGTTTTTTTTCCCCTTTTGTATCTGAATCTCTCTGAGCAATCCAGCAGGATCAGATCTGTAAGGTGTAGGAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTGGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGTTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA CCTTGTTTAAACA GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTACAAAATTGACGCCAATCACCTATAAACAGATTGTGAGCTTTTATCTTAGTAAAATAAAGTGTGACATTCTA] [-] EMBL BI305535 [ GAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTTGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGGTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA CCTTGTTCAAACA GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGA ] [+] EMBL BI800904 [ AATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCACCCTTGTTTAAACACGGGCTTTCTTGAAAGGGATC ATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACCCAGTTCTCGATCTCATACCTGAAAAC AAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTAC AAATTGACGCC ATCACCTATAAAC GATTGTGAGCTTTTATCTTAGTAAAATAAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||