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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5849 cluster # 5849       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5849#0 length = 694 sequences # 3  

consensusID : consensus_5849#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 694
fasta sequence
                              [CATGGCCAGAAACCCTAGCCTCCATCCCCTCCCGAGCCTTCGCCGCCGCAAGTAGATCTGAGACTCTCTGTTTTTTTTCCCCTTTTGTATCTGAATCTCTCTGAGCAATCCAGCAGGATCAGATCTGTAAGGTGTAGGAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTGGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGTTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA-CCTTGTTTAAACA-GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTACAAAATTGACGCCAATCACCTATAAACAGATTGTGAGCTTTTATCTTAGTAAAATAAAGTGTGACATTCTA]

[+] EMBL CA764213             [CATGGCCAGAAACCCTAGCCTCCATCCCCTCCCGAGCCTTCGCCGCCGCAAGTAGATCTGAGACTCTCTGTTTTTTTTCCCCTTTTGTATCTGAATCTCTCTGAGCAATCCAGCAGGATCAGATCTGTAAGGTGTAGGAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTGGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGTTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA CCTTGTTTAAACA GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTACAAAATTGACGCCAATCACCTATAAACAGATTGTGAGCTTTTATCTTAGTAAAATAAAGTGTGACATTCTA]
[-] EMBL BI305535             [                                                                                                                                         GAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGGGTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTTGTTTGTGTGTGAGTTGGGTGAATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGAGGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGTTGCGGTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCA CCTTGTTCAAACA GGGCTTTCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGA                                                                               ]
[+] EMBL BI800904             [                                                                                                                                                                                                                                                                                                                                                                                                               AATTTTTTCATGGTTTTTGGGAGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCACCCTTGTTTAAACACGGGCTTTCTTGAAAGGGATC ATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAACCCAGTTCTCGATCTCATACCTGAAAAC AAAGGCCCATACTGTGTAAACTGTGATTATGCTTCTGTTAAATGGGATATTTGTAC AAATTGACGCC ATCACCTATAAAC GATTGTGAGCTTTTATCTTAGTAAAATAAAaaaaaaa      ]


>consensus_5849#0 CATGGCCAGAAACCCTAGCCTCCATCCCCTCCCGAGCCTTCGCCGCCGCAAGTAGATCTG AGACTCTCTGTTTTTTTTCCCCTTTTGTATCTGAATCTCTCTGAGCAATCCAGCAGGATC AGATCTGTAAGGTGTAGGAGTAGTGATCTGAAATCCGTCAGCAGTAGTTGATACATCTGG GTTTTTTTGGTTATTGTTGTTTTTTATGTGATTTTTGTGGTTTGTGTGTGAGTTGGGTGA ATCAAGTGGATCGATGATGCTTTTCAAGAAATACTGCGTTATCTTCCTGATTACATGTGA GGCTGTTGCTATCATGGCCATGGCCTCCTGATGACACAATTATCTTGCTGAGATCCAAGT TGCGTTAACTTTGCCCTTTTCTTTTTTTCTTCTCTTCTGAATTTTTTCATGGTTTTTGGG AGAGATTTTCGTAACTTGATTACAGTTCTAGGAAAAGGCCACCTTGTTTAAACAGGGCTT TCTTGAAAGGGATCAATTTGCTAGGAGTACATGATTCTAAAAGCGATTTCGAAATAAAAC ACAGTTCTCGATCTCATACCTGAAAACAAAAGGCCCATACTGTGTAAACTGTGATTATGC TTCTGTTAAATGGGATATTTGTACAAAATTGACGCCAATCACCTATAAACAGATTGTGAG CTTTTATCTTAGTAAAATAAAGTGTGACATTCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)