These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5850#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3632 fasta sequence [TTGGTTCCTCCTCCAGCCACCAGCTCGATCCTTTCTTCCTCGTTCTCGCGATCTGACCTCCCCATCTCTCCTCACTCGATTTCCCGGCGGCTAGCGACGCGGGAGGAGGCGCCCGGCCGGCCGGCGAGCACGTGCTGATAGCGGCCGAGGAGGCGTTGCGGCTGGACGAAGAGCGCCGCGTGCAGCGAAGCGGC-AGTCCGGCGAGCAGGAGGTGGATCTGGACGGCGTCGTCTTCGCCTGAGCCAGCCTCACCACGCGTCGGCCTCCCGAGGCGGGGAGTTCATCCGCGCGAACGGCCCCGGTAGCGGGGCGAGGCGTTCCGAATCTGGCGGCATCCTCGGAGGCACACGGCAACATCTCGGTCTGCTTGTTCTTCACGCTGCGCCACAAGCTCAACTGCAATGGCCGCCGCCGCGGCGTCAAGCTCGTCGCCGGAGTTCTCGTAGTAGCCGAGATACTGATTTTCACGGGGATGCATTAAGCTACGGTCTAACTTGTGGGAGCTGGATACTGCTGAAAAGGGGACCAAATGGAGCTTCAGCAGGAAAGCTCGGATGCGGGGACTTTGTTCTCGGCGCCATCAAGGAACCTATCATCCTCTTCATCAGCATTTGTTTCTGCTAACCAATCCCCTTTCTTCACGCCACGATGTCTATCTGCCCGTGTCTCAGATCACGCACATCCTGAGAACAATAGTTCCTTGAGTGGTACTGTGCTGAAAATCAGTGATATTCTTTCCAGCGACACTCTGTTAAAGCGGGAGCAATTACCATCAGCCACTGTGGGGTTATTGCCATCGGATGCTTCTCCTCCTCCTAGTATTTGCACTTCAAGCAATTTTGACACTCCAGCAATTGTCTATAACAATCCTAGCTTCATTTCCACCTTCAGTGACCCATGTCAAGGCAGTTCATCAGCAACTAGCACTGGTGTCCGTTCAACTCAGAAGGAGAAGCATAAGAGACAGTGGGGATTATATCGGAAATCTTCATCCTCTCAACCTACGACATCAGCTACCTCTGTCAACAGACTTCGGAGCTTTGATGTGTACATAGGATTTCATGGCCGTAAGGCTTCACTACTGAGGTTCACTAATTGGCTTCGTGCAGAGCTTGAGATCCATGGAATCAGCTGCTTTGCTTCTGACAGGTCTAGATGCCGGATTTCTCACAGCCATGATACTATTGAGAGGATTATGAATGCTTCCACATATGGAGTTGTCATCCTTACAAGAAAATCATTTGGCAATCCTTATACCATCGAGGAGCTGAGGAACTTCTTTGGCAAGAAAAATCTGATCCCTATATTCTTTGACTTGGGTGCTGCTGATTGCCTTGCCAGAGATATTATTGAGAAGAGAGGAGAACTGTGGGAGAGACATGGCGGCGAGCTTTGGATGTTATATGGTGGAATGGAACAGGAATGGAGGGAATCAGTTGATGCTCTTTCTCGGGTGTCAGATGTGCAATTAGAAGCAAATGATGGCAATTGGAGACATTGCATACTTCAAACTATCATTGTTTTGGCCACAAAATTGGGCAGGAGAAGTGTGGTTGATCGGGTGAATAGGTGGAGAGGAAGGGTGGAGAAGGAGGAATTCCCTTTCCCTCGTAATGCTGATTTTGTTGGTAGGAAAAAAGAGCTCTCAGAGTTGGAACTCATTTTATTTGGAGATGTCAGCGGAGATGGGGAAAGAGAGTATTTTGAGATCAAGACAAAGCAGAGAAGAAAGGGCCTCGTAATTGGACGGTCTGTTAACAATTATGAGCAAGTAAATACTGATGATGGTAAAGGAAAGGAGCCGGTTTTGTGGAAGGAAACCAAGGAAAACATTGAGATGCAGAGACTGGGGAGTCCACCACGACATGGAAGGCCATCGAGAACAAAGAATGATGGCAGGTATGGGAGGAAAAGAAGATGTAGGAAGATACTCTACGGAAAGGGTATTGCTTGCATTTCAGGGGAATCTGGAATTGGCAAGACAGACTTGGTTTTGGAGTATGCATACAGGTTCTCCCAGAGATATAAGATGGTCTTATGGGTCAGAGGGGAAAGCAGGTACATTCGACAAAACTACTTAGCTTTGCGGACTTTTCTGGAAGTAGATTTAAGTGTTGATAGTCACTTGCATGAGAAAGGAAGTGACCGATGCTTTGAAGAGCAGGAAGAGGAAGCCATTGCCAAAATACGGCAAGAGCTGATGCGGGACATACCGTTTTTAGTAATCATTGATAATCTTGAGAGTGAGAAAGACTGGTGGGATAAGAGAGTCATAACAGACCTTCTTCCACATTTTGGTGGAGAGACCCACTTCATCATAACAACACGCCTTCCACGTGTGATGAACTTGGAGCCAATGAAGCTTTCTTATTTGTCTGGTGCCGAGGCAATGTCTTTGATGAAGGGAGGCGTCAAGGATTATCCACTGGTGGAAATTGATGCACTAAAGGCCATTGAAGAAAAGCTTGGAAGACTCACTCTTGGCCTTGGTATTGTGGGATCTATACTCTCAGAGCTTCCAATCACTCCGAGCAGGCTTCTTGATACGTTGAGTCGGACACTGCCCATAAGAGATTGTTCTTGGAATGAGAGAGATGCTATCAGTTTGAAAAATCATGAAATCCTTGTCCGGCTCCTGGATGTCTGCCTATCAATATTTGACCATGCCGATGGTCCTAGGAGTCTGGCAACCCGGATGGTTCAAGTGTGTGGTTGGTTTGCACCTTCTGCGGTCCCAATACATATGTTGGCGTTGGCTGCACATAAAGTCCCAAAGAAGCATCGGAGGGGTCCAAGGTGGAGGAAGTGGTGGCGAACGCTGACTTGTGGCTTGGCTACATCTAGGATGAAGAGATCTGAAGCTGAAGCAGCTGCAATGCTGATGAGGTTTGGAATTGCCAGATGCAGCACAAAGCCTGAATATGTACAGTTCCATGATCTGATCAGGCTATATGCTCGAAAGCGAGGAGGCACACGAATGGCACAAGCTGTGGTCCAATCGATCTACCTCCGAGGCTCAATTAAACATTCTTCTGAACATCTGTGGGCTGCCTGCTTCATGTTTTTTGGATTTGGTTCTGATCCTTTCCTGGTAGAACCGAGGCCATCAGAGTTGATTTTCTTTGTGAAGCAGATCGTCGTGCCACTTGCAATCAACACATTCATCACATATTCCCGATGTAATGCAGCACTGGAGCTGCTGCGTCTATGCACTGAGGCATTGGAGCGGGCAGCTGACTCAATGCTTTCTCATGCTGGCAAATGGAGAGAAACACCATTGTCCTGTTTCAGGCCAACTCAGTCAGAAGCCCAATACACCTACCTTTGGCAGGAGCTGGCTCTTCTGAAAGCATCTGTATTGGAAACACGGGCCAAGCTGATGCTTCGAGGTGGACAGTATGACACTGGAGATGACCTAATAAGGAAGGCCATATTCATCCTGACTTCCATTTGTGGCGAGCACCATCCTAACACGGTTTCTGCTCGAGAAACCCTCAGTAAACTCACAAGGCTTCTTACAAATGTTCAGCTTAGTTGACTCATATAGCTTAGGACTTCACCAATATATTCTTTTCAGTGTGGCTTTTCATAAACACTGTACAAAATGCCCCAGATCATCAAATAACAAAAGA] [+] EMBL AK101847 [TTGGTTCCTCCTCCAGCCACCAGCTCGATCCTTTCTTCCTCGTTCTCGCGATCTGACCTCCCCATCTCTCCTCACTCGATTTCCCGGCGGCTAGCGACGCGGGAGGAGGCGCCCGGCCGGCCGGCGAGCACGTGCTGATAGCGGCCGAGGAGGCGTTGCGGCTGGACGAAGAGCGCCGCGTGCAGCGAAGCGGC AGTCCGGCGAGCAGGAGGTGGATCTGGACGGCGTCGTCTTCGCCTGAGCCAGCCTCACCACGCGTCGGCCTCCCGAGGCGGGGAGTTCATCCGCGCGAACGGCCCCGGTAGCGGGGCGAGGCGTTCCGAATCTGGCGGCATCCTCGGAGGCACACGGCAACATCTCGGTCTGCTTGTTCTTCACGCTGCGCCACAAGCTCAACTGCAATGGCCGCCGCCGCGGCGTCAAGCTCGTCGCCGGAGTTCTCGTAGTAGCCGAGATACTGATTTTCACGGGGATGCATTAAGCTACGGTCTAACTTGTGGGAGCTGGATACTGCTGAAAAGGGGACCAAATGGAGCTTCAGCAGGAAAGCTCGGATGCGGGGACTTTGTTCTCGGCGCCATCAAGGAACCTATCATCCTCTTCATCAGCATTTGTTTCTGCTAACCAATCCCCTTTCTTCACGCCACGATGTCTATCTGCCCGTGTCTCAGATCACGCACATCCTGAGAACAATAGTTCCTTGAGTGGTACTGTGCTGAAAATCAGTGATATTCTTTCCAGCGACACTCTGTTAAAGCGGGAGCAATTACCATCAGCCACTGTGGGGTTATTGCCATCGGATGCTTCTCCTCCTCCTAGTATTTGCACTTCAAGCAATTTTGACACTCCAGCAATTGTCTATAACAATCCTAGCTTCATTTCCACCTTCAGTGACCCATGTCAAGGCAGTTCATCAGCAACTAGCACTGGTGTCCGTTCAACTCAGAAGGAGAAGCATAAGAGACAGTGGGGATTATATCGGAAATCTTCATCCTCTCAACCTACGACATCAGCTACCTCTGTCAACAGACTTCGGAGCTTTGATGTGTACATAGGATTTCATGGCCGTAAGGCTTCACTACTGAGGTTCACTAATTGGCTTCGTGCAGAGCTTGAGATCCATGGAATCAGCTGCTTTGCTTCTGACAGGTCTAGATGCCGGATTTCTCACAGCCATGATACTATTGAGAGGATTATGAATGCTTCCACATATGGAGTTGTCATCCTTACAAGAAAATCATTTGGCAATCCTTATACCATCGAGGAGCTGAGGAACTTCTTTGGCAAGAAAAATCTGATCCCTATATTCTTTGACTTGGGTGCTGCTGATTGCCTTGCCAGAGATATTATTGAGAAGAGAGGAGAACTGTGGGAGAGACATGGCGGCGAGCTTTGGATGTTATATGGTGGAATGGAACAGGAATGGAGGGAATCAGTTGATGCTCTTTCTCGGGTGTCAGATGTGCAATTAGAAGCAAATGATGGCAATTGGAGACATTGCATACTTCAAACTATCATTGTTTTGGCCACAAAATTGGGCAGGAGAAGTGTGGTTGATCGGGTGAATAGGTGGAGAGGAAGGGTGGAGAAGGAGGAATTCCCTTTCCCTCGTAATGCTGATTTTGTTGGTAGGAAAAAAGAGCTCTCAGAGTTGGAACTCATTTTATTTGGAGATGTCAGCGGAGATGGGGAAAGAGAGTATTTTGAGATCAAGACAAAGCAGAGAAGAAAGGGCCTCGTAATTGGACGGTCTGTTAACAATTATGAGCAAGTAAATACTGATGATGGTAAAGGAAAGGAGCCGGTTTTGTGGAAGGAAACCAAGGAAAACATTGAGATGCAGAGACTGGGGAGTCCACCACGACATGGAAGGCCATCGAGAACAAAGAATGATGGCAGGTATGGGAGGAAAAGAAGATGTAGGAAGATACTCTACGGAAAGGGTATTGCTTGCATTTCAGGGGAATCTGGAATTGGCAAGACAGACTTGGTTTTGGAGTATGCATACAGGTTCTCCCAGAGATATAAGATGGTCTTATGGGTCAGAGGGGAAAGCAGGTACATTCGACAAAACTACTTAGCTTTGCGGACTTTTCTGGAAGTAGATTTAAGTGTTGATAGTCACTTGCATGAGAAAGGAAGTGACCGATGCTTTGAAGAGCAGGAAGAGGAAGCCATTGCCAAAATACGGCAAGAGCTGATGCGGGACATACCGTTTTTAGTAATCATTGATAATCTTGAGAGTGAGAAAGACTGGTGGGATAAGAGAGTCATAACAGACCTTCTTCCACATTTTGGTGGAGAGACCCACTTCATCATAACAACACGCCTTCCACGTGTGATGAACTTGGAGCCAATGAAGCTTTCTTATTTGTCTGGTGCCGAGGCAATGTCTTTGATGAAGGGAGGCGTCAAGGATTATCCACTGGTGGAAATTGATGCACTAAAGGCCATTGAAGAAAAGCTTGGAAGACTCACTCTTGGCCTTGGTATTGTGGGATCTATACTCTCAGAGCTTCCAATCACTCCGAGCAGGCTTCTTGATACGTTGAGTCGGACACTGCCCATAAGAGATTGTTCTTGGAATGAGAGAGATGCTATCAGTTTGAAAAATCATGAAATCCTTGTCCGGCTCCTGGATGTCTGCCTATCAATATTTGACCATGCCGATGGTCCTAGGAGTCTGGCAACCCGGATGGTTCAAGTGTGTGGTTGGTTTGCACCTTCTGCGGTCCCAATACATATGTTGGCGTTGGCTGCACATAAAGTCCCAAAGAAGCATCGGAGGGGTCCAAGGTGGAGGAAGTGGTGGCGAACGCTGACTTGTGGCTTGGCTACATCTAGGATGAAGAGATCTGAAGCTGAAGCAGCTGCAATGCTGATGAGGTTTGGAATTGCCAGATGCAGCACAAAGCCTGAATATGTACAGTTCCATGATCTGATCAGGCTATATGCTCGAAAGCGAGGAGGCACACGAATGGCACAAGCTGTGGTCCAATCGATCTACCTCCGAGGCTCAATTAAACATTCTTCTGAACATCTGTGGGCTGCCTGCTTCATGTTTTTTGGATTTGGTTCTGATCCTTTCCTGGTAGAACCGAGGCCATCAGAGTTGATTTTCTTTGTGAAGCAGATCGTCGTGCCACTTGCAATCAACACATTCATCACATATTCCCGATGTAATGCAGCACTGGAGCTGCTGCGTCTATGCACTGAGGCATTGGAGCGGGCAGCTGACTCAATGCTTTCTCATGCTGGCAAATGGAGAGAAACACCATTGTCCTGTTTCAGGCCAACTCAGTCAGAAGCCCAATACACCTACCTTTGGCAGGAGCTGGCTCTTCTGAAAGCATCTGTATTGGAAACACGGGCCAAGCTGATGCTTCGAGGTGGACAGTATGACACTGGAGATGACCTAATAAGGAAGGCCATATTCATCCTGACTTCCATTTGTGGCGAGCACCATCCTAACACGGTTTCTGCTCGAGAAACCCTCAGTAAACTCACAAGGCTTCTTACAAATGTTCAGCTTAGTTGACTCATATAGCTTAGGACTTCACCAATATATTCTTTTCAGTGTGGCTTTTCATAAACACTGTACAAAATGCCCCAGATCATCAAATAACAAAAGA] [+] EMBL AU181521 [ TGGTTCCTCCTCCAGCCACCAGCTCGATCCTTTCTTCCTCGTTCTCGCGATCTGACCTCCCCATCTCTCCTCACTCGATTTCCCGGCGGCTAGCGACGCGGGAGGAGGCGCCCGGCCGGCCGGCGAGCACGTGCTGATAGCGGCCGAGGAGGCGTTGCGGCTGGACGAAGAGCGCCGCGTGCAGCGAAGCGGC AGTCCGGCGAGCAGGAGGTGGATCTGGACGGCGTCGTCTTCGCCTGAGCCAGCCTCACCACGCGTCGGCCTCCCGAGGCGGGGAGTTCATCCGCGCGAACGGCCCCGGTAGCGGGGCGAGGCGTTCCGAATCTGGCGGCATCCTCGGAGGCACACGGCAACATCTCGGTCTGCTTGTTCTTCACGCTGCGCCACAAGCTCAACTGCAATGGCCGCCGCCGCGGCGTCAAGCTCGTCGCCGGAGTTCTCGTAGTAGC ] [+] EMBL C26958 [ TGGTTCCTCCTCCAGCCACCAGCTCGATCCTTTCTTCCTCGTTCTCGCGATCTGACCTCCCCATCTCTCCTCACTCGATTTCCCGGCGGCTAGCGACGCGGGAGGAGGCGCCCGGCCGGCCGGNGAGCACGTGCTGATAGCGGCCGAGGAGGCGTTGCGGCTGGACGAAGAGCGCCGCGTNCAGCGAA CGTCAAGTCCGTCGAGCAGGAGGTGGATCTNGACGGNGTCGTCTTCGCCTGAGCCAGNCTCACCACGCGTCGGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||