Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5860 cluster # 5860       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5860#0 length = 454 sequences # 3  

consensusID : consensus_5860#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 454
fasta sequence
                              [CGCCGCCGACGTCGCCATCGCCGAGTTCCTCCACGCAACAATCCGCTTCCCCCGCAAGGAAGCAGCGCCGCGCGGCCGTCTCCGACCTGCGAATCCGCCATTAAATCCGCGCGGCAGGGGGGGTGCTCTGCGTCGCCGGTGGGCGCGCGTAACCTTTTCTCTCCCCTC-CCCCCCTCCCCGTCTCCCGATCTGCAGGGCTGCCGGCCGGCCGGCGACCTGAGTTTGGGAGGGTTTGACGCGCGGCTCGCCTCCATCTCCGTCGGAAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATATCCCTGTAAATATAAGGAAACTCAGAAAGCAAAACAGACGTCAGCGGGTGATCACGTTGTCTAAAAGTTCT]

[+] EMBL CB639593             [CGCCGCCGACGTCGCCATCGCCGAGTTCCTCCACGCAACAATCCGCTTCCCCCGCAAGGAAGCAGCGCCGCGCGGCCGTCTCCGACCTGCGAATCCGCCATTAAATCCGCGCGGCAGGGGGGGTGCTCTGCGTCGCCGGTGGGCGCGCGTAACCTTTTCTCTCCCCTC CCCCCCTCCCCGTCTCCCGATCTGCAGGGCTGCCGGCCGGCCGGCGACCTGAGTTTGGGAGGGTTTGACGCGCGGCTCGCCTCCATCTCCGTCGGAAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATATCCCTGTAAATATAAGGAAACTCAGAAAGCAAAACAGACGTCAGCGGGTGATCACGTTGTCTAAAAGTTCT]
[+] EMBL CB631743             [  CCGCCGATCTCTCCGGCGCCGAGTTCCTCCACGCAACAATCCCCTTCCCCCGCACGGAAGCAGCGACGCGC GCCGTCTCCGACCTGCGAATCCGCCATTAAATCCGCGCGGCA  GGGGGTGCTCTGCGTCGCCGGTGGGCGCGCGCAACCTTTTCTCTCCTCTCTCCCCCCTCCCCGTCTCCCGATCTGCAGGGCTGCCGGCCGTCCGGCGACCTGAGTTTGGGAGGGTTTGACGCGCGGCTCGCCTCCATCTCCGTCGGAAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATATCCCTGTAAATAGAAGGAAACTCAGAAAGCAAAACAGACGTGAGTGGGTGATCGCGTTGTCTAAAAGTTCT]
[+] EMBL CB640629             [                                                                                                                                TGCGTCGCCGGTGGGCGCGCGTAACCTTTTCTCTCCCCTC CCCCCCTCCCCGTCTCCCGATCTGCAGGGCTGCCGGCCGGCCGGCGACCTGAGTTTGGGAGGGTTTGACGCGCGGCTCGCCTCCATCTCCGTCGGAAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATATCCCTGTAAATATAAGGAAACTCAGAAAGCAAAACAGACGTCAGCGGGTGATCACGTTGTCTAAAAGTTCT]


>consensus_5860#0 CGCCGCCGACGTCGCCATCGCCGAGTTCCTCCACGCAACAATCCGCTTCCCCCGCAAGGA AGCAGCGCCGCGCGGCCGTCTCCGACCTGCGAATCCGCCATTAAATCCGCGCGGCAGGGG GGGTGCTCTGCGTCGCCGGTGGGCGCGCGTAACCTTTTCTCTCCCCTCCCCCCCTCCCCG TCTCCCGATCTGCAGGGCTGCCGGCCGGCCGGCGACCTGAGTTTGGGAGGGTTTGACGCG CGGCTCGCCTCCATCTCCGTCGGAAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAG CCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGG CTGTCCCAGAATGTGTTATCATATCCCTGTAAATATAAGGAAACTCAGAAAGCAAAACAG ACGTCAGCGGGTGATCACGTTGTCTAAAAGTTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)