cluster # 5884

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Oryza sativa
cluster # 5884 cluster # 5884 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5884#0 length = 367 sequences # 3

consensusID : consensus_5884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 367
fasta sequence

                              [TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG-G-GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC-TGCACCACGGAGNGCTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC-AGAACTGCAAGCACCGCACGGAGTTGT]

[+] EMBL AU067957             [TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG G GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC TGCACCACGGAGTGCTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC AGAACTGCAAGCACCGCACGGAGTTGT]
[+] EMBL OSC29121             [                     CCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGACGCGGCGGCGGGTG GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTTGCACCACGGAGNGCTTCTGGAGCTTTTCATCATTCTGGAAACACCTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGCAAGAACT                     ]
[+] EMBL C72505               [                      CCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG GNGGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC TGCACCACGGAGN CTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC AGAACTNCAAGCACCGCACGG      ]




>consensus_5884#0
TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGT
CCGCCGGCGATCGCCGCGGCGGCGGGGGGCCTCCCGGCTCCGGCGACGACTCCGGGGGTG
GTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAAT
GGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTGCACCACGGAGNGCTTCTG
GAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAG
GCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGCAGAACTGCAAGCACCGCACG
GAGTTGT

clustalw multiple alignements is not computed in this case