cluster # 5891

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Oryza sativa
cluster # 5891 cluster # 5891 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5891#0 length = 1210 sequences # 3
consensusID : consensus_5891#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1210
fasta sequence
                              [ATATCTCTTGGAAAAGACAATGAAATAAACCTAAATCAACCTGTAGAGCTTGTACTTTCTGCTATGGCAGAAACAGGCCTTGTTAGTCTGCCTTCTCTTTTGACAGCTGTGTTGCTCCAGGCCAACAACAGATCATCATCAGAACAGGCTTCAGCAATTCTTCCATCGAATTTTGAAGAGGTAGCCACTGGTGTTTTGAAAGTTCTGAACAACATGGCATGTTTGGATATCACCCTTCTTCAATGCATGCTGGCTAGATCGGATCTAAAGATGGAGTTTTTCCATTTGATCAGTTTCCTTCTTAGCCATTGCATGAATAAATGGAGAGTGCCAAATGATCAGGTTGGTTTACTGCTTCTAGAGTCTCTGCTACTTCTTGGTTACTTCTCTTTGTTCCATGCTGGGAACCAAGCAGTTCTTCGGTGGGGAAAGAGTCCCACCATACTTCACAAGGTGTGCGACTTGCCTTTTGTTTTCTTCAGTGACCCGGAGTTGATGCCTATCTTGGCTACTGCTCTTATCGCGGACTGTTATGGTTGTGACCATAATATAAGTGTAGTTCAGCAAGAAATAAGCACAGAGATGCTTCGTTCTTTGATCAAATCATGCAAAACACCAGGACTGGCTTCTTCAGATTCCATTCTTTTGGATGGTTGGAGAACCAACAGTTCCAGTGATAATACACAGATCTTATTGGATACAAGAAACCCGCAAGGTGATATCTCAATAAGGTCGAACCGCAAAAGTGCACGGCCAGTTTTAGGAAAAGGAGTTTCAGGGGTCATCAGATTGAGCAGAAATAAGGGCCAAAGAGACGGCCGAGGAGCAAGAATTGGTGATGATGGCCCTCTGAAGCAAAGAGCTGGAGAAACTTCATCTAACTTCATGTTGCATAGAAAAATCCCAGCTTCTTTTTTGGACAAGGCTGAAGAGTTTTTCTGTAGTGAAAATGATACAGCAGGGAATATAACAAACTGACCAGACCCCAGAACAAGCTACTTAATTTGGCCCTTTTTTATTTCCTTTTGAGATGATGGTTCTTGAGAATATACAACTAGACAGGTTAAACTTCAGCTGGACGGATGGTGATGATTAGGGATTGACTGTATAGGTTTTGGAAAAGACATTTGCCATTTTTACAAGGCTTGCTCGAGGTAACTCGGCCAAATTGGTCAACCCCTGGGAGCTAATATAATATACGGGTCAAAAT]

[+] EMBL CB632198             [ATATCTCTTGGAAAAGACAATGAAATAAACCTAAATCAACCTGTAGAGCTTGTACTTTCTGCTATGGCAGAAACAGGCCTTGTTAGTCTGCCTTCTCTTTTGACAGCTGTGTTGCTCCAGGCCAACAACAGATCATCATCAGAACAGGCTTCAGCAATTCTTCCATCGAATTTTGAAGAGGTAGCCACTGGTGTTTTGAAAGTTCTGAACAACATGGCATGTTTGGATATCACCCTTCTTCAATGCATGCTGGCTAGATCGGATCTAAAGATGGAGTTTTTCCATTTGATCAGTTTCCTTCTTAGCCATTGCATGAATAAATGGAGAGTGCCAAATGATCAGGTTGGTTTACTGCTTCTAGAGTCTCTGCTACTTCTTGGTTACTTCTCTTTGTTCCATGCTGGGAACCAAGCAGTTCTTCGGTGGGGAAAGAGTCCCACCATACTTCACAAGGTGTGCGACTTGCCTTTTGTTTTCTTCAGTGACCCGGAGTTGATGCCTATCTTGGCTACTGCTCTTATCGCGGACTGTTATGGTTGTGACCATAATATAAGTGTAGTTCAGCAAGAAATAAGCACAGAGATGCTTCGTTCTTTGATCAAATCATGCAAAACACCAGGACTGGCTTCTTCAGATTCCATTCTTTTGGATGGTTGGAGAACCAACAGTTCCAGTGATAATACACAGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB676008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGACCAGAATAGAAGTGTAGTTCAGCAAGAAATAAGCACAGAGATGCTTCGTTCTTTGATCAAATCATGCAAAACACCAGGACTGGCTGCTTCAGATTCCATTCTTTTGGATGGTTGGGGAACCAACAGTTCCAGTGATAATACACAGATTTTATTGGATACAAGAAACCCGCAAGGTGATATCTCAATAAGGTCGAACCGCAAAAGTGCACGGCCAGTTTTAGGAAAAGGAGTTTCAGGGGTCATCAGATTGAGCAGAAATAAGGGCCAAAGAGACGGCCGAGGAGCAAGAATTGGTGATGATGGCCCTCTGAAGCAAAGAGCTGGAGAAACTTCATCTAACTTCATGTTGCATAGAAAAATCCCAGCTTCTTTTTTGGACAAGGCTGAAGAGTTTTTCTGTAGTGAAAATGATACAGCAGGGAATATAACAAACTGACCAGACCCCAGAACAAGCTACTTAATTTGGCCCTTTTTTATTTCCTTTTGAGATGATGGTTCTTGAGAATATACAACTAGACAGGTTAAACTTCAGCTGGACGGATGGTGATGATTAGGGATTGACTGTATAGGTTTTGGAAAAGACATTTGCCATTTTTACAAGGCTTGCTCGAGGTAACTCGGCCAAATTGGTCAACCCCTGGGAGCTAATATAATATACGGGTCAAAAT]
[+] EMBL AK060231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGTTTTAGGAAAAGGAGTTTCAGGGGTCATCAGATTGAGCAGAAATAAGGGCCAAAGAGACGGCCGAGGAGCAAGAATTGGTGATGATGGACCTCTGAAGCAAAGAGCTGGAGAAACTTCATCTAACTTCATGTTGCATAGAAAAATCCCAGCTTCTTTCTTGGACAAGGCTGAAGAGTTCTTCTGTAGTGAAAATGATACAGCAGCGAATATAACAAACTGACCAGACCACAGAACAAGCTACTTAATTTGGACCTTTTTTATTTCCTTTTGAGATGATGGTTCTTGAGAATATACAACTAGACAGGCTAAACTTCAGCTGGACGGATGGTGATGATTAGGGATTGACTGTATAGGTTTTGGAAAAGACATTTGCCATTTTTACAAGGCTTGCTCGAGGTAACTCGGCCAAATTGGTCAAACCCTGGGAGCTAATATAATATACGTGTCAAAA ]




>consensus_5891#0
ATATCTCTTGGAAAAGACAATGAAATAAACCTAAATCAACCTGTAGAGCTTGTACTTTCT
GCTATGGCAGAAACAGGCCTTGTTAGTCTGCCTTCTCTTTTGACAGCTGTGTTGCTCCAG
GCCAACAACAGATCATCATCAGAACAGGCTTCAGCAATTCTTCCATCGAATTTTGAAGAG
GTAGCCACTGGTGTTTTGAAAGTTCTGAACAACATGGCATGTTTGGATATCACCCTTCTT
CAATGCATGCTGGCTAGATCGGATCTAAAGATGGAGTTTTTCCATTTGATCAGTTTCCTT
CTTAGCCATTGCATGAATAAATGGAGAGTGCCAAATGATCAGGTTGGTTTACTGCTTCTA
GAGTCTCTGCTACTTCTTGGTTACTTCTCTTTGTTCCATGCTGGGAACCAAGCAGTTCTT
CGGTGGGGAAAGAGTCCCACCATACTTCACAAGGTGTGCGACTTGCCTTTTGTTTTCTTC
AGTGACCCGGAGTTGATGCCTATCTTGGCTACTGCTCTTATCGCGGACTGTTATGGTTGT
GACCATAATATAAGTGTAGTTCAGCAAGAAATAAGCACAGAGATGCTTCGTTCTTTGATC
AAATCATGCAAAACACCAGGACTGGCTTCTTCAGATTCCATTCTTTTGGATGGTTGGAGA
ACCAACAGTTCCAGTGATAATACACAGATCTTATTGGATACAAGAAACCCGCAAGGTGAT
ATCTCAATAAGGTCGAACCGCAAAAGTGCACGGCCAGTTTTAGGAAAAGGAGTTTCAGGG
GTCATCAGATTGAGCAGAAATAAGGGCCAAAGAGACGGCCGAGGAGCAAGAATTGGTGAT
GATGGCCCTCTGAAGCAAAGAGCTGGAGAAACTTCATCTAACTTCATGTTGCATAGAAAA
ATCCCAGCTTCTTTTTTGGACAAGGCTGAAGAGTTTTTCTGTAGTGAAAATGATACAGCA
GGGAATATAACAAACTGACCAGACCCCAGAACAAGCTACTTAATTTGGCCCTTTTTTATT
TCCTTTTGAGATGATGGTTCTTGAGAATATACAACTAGACAGGTTAAACTTCAGCTGGAC
GGATGGTGATGATTAGGGATTGACTGTATAGGTTTTGGAAAAGACATTTGCCATTTTTAC
AAGGCTTGCTCGAGGTAACTCGGCCAAATTGGTCAACCCCTGGGAGCTAATATAATATAC
GGGTCAAAAT
clustalw multiple alignements is not computed in this case