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Oryza sativa
cluster # 5893 cluster # 5893       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5893#0 length = 834 sequences # 3  

consensusID : consensus_5893#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 834
fasta sequence
                              [GCTCCCTACTGTGGCCGGAAAGCTGCTTGATGAGGGGGAGGGTTCTCTGGGGAACGCGAGCTCAGGCACCCCGGCCGTGGACGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTGCGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAGTGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAGTAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAAGTGCTCCAGCCAGGATGCACAAAAGAGATCTTTCCTATAGTGATGTTGACCGGAAGCCTTCTTTCCGCACAAGAAA]

[+] EMBL CB632251             [GCTCCCTACTGTGGCCGGAAAGCTGCTTGATGAGGGGGAGGGTTCTCTGGGGAACGCGAGCTCAGGCACCCCGGCCGTGGACGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTGCGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAGTGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAGTAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAAGTGCTCCAGCCAGGATGCACAAAAGAGATCTTTCCTATAGTGATGTTGACCGGAAGCC                  ]
[+] EMBL CB635495             [                                                                       CGGCCCTGGACGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTGCGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAGTGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAGTAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAGTTGCTCCAGCCAGGATGCACAAAGGAGATCTTTCCTATAGTGATGTTGACCGGAAGCCTTCTTTCCGCACAAGAAA]
[+] EMBL CB638105             [                                                                                                                                                                                                        CGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGAAGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGACAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGATCGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGCAATTGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCTGCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAAGGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTGCACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGC                                                                                                                           ]


>consensus_5893#0 GCTCCCTACTGTGGCCGGAAAGCTGCTTGATGAGGGGGAGGGTTCTCTGGGGAACGCGAG CTCAGGCACCCCGGCCGTGGACGCGTCGCCCAAGGATGTCCGCGTGAAGCAGGAGCAGTG CGATGAGGAGGCGAAGCATTTCAAGAATGAGGTGATGGATCAGGATAGCTGCAATGAGAG TGCATTGGTCTCCCACATTGCGTTTCAGCGGCCGGTGAATCACCATGGGCGGAAGGGGGA AGATCCGGAGGGGAGTCATGCTGTGATTGAGGACCCCAAGGCCAAGTCCGAGGCACTGGA CAAGGAATCCTCAATGATAAGCTGCACCAAGGCTGAATTGGGTTGTAATTTTGCAGCGAT CGCTGATAGGTGGTCGCCTGAATCCGTGGAGTCAGGGGCCTTCACTGGGGATGCAGCTGC AATAGCGATGCCGGCTACCACATCAGGCTTCCACAAGAATGCTCCAGATATGTATAATCT GCTCGATCCAATGGATGTGGATGTAAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGG CGAAATGCCGTTGTATGGCAATAAAATTCGCCGATCGACCTCTTTCCCGAGGGTCCCCAA GGGAGGGGCGGGGTTTACTGTAGATAGAGATGAAGATGATGATGATAAATCTTCCGGGTG CACTCATCCGAGCACCGCTACTAACAGGGGTTTCAGGCCCAATTGTACAGCTGGTCATAG TAGGGTAAAGAAGTTGCTCGCCTGTAAGCACAGGAAAAGTGCTCCAGCCAGGATGCACAA AAGAGATCTTTCCTATAGTGATGTTGACCGGAAGCCTTCTTTCCGCACAAGAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)