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Oryza sativa
cluster # 5902 cluster # 5902       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5902#0 length = 819 sequences # 3  

consensusID : consensus_5902#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 819
fasta sequence
                              [ATCCCTGTAAATAGGAGCATACATCTCTCTCCCTTCCTAGAGAGAGAAAGCCATAGCTAGCTAGAGAGAGAAAGCTTAAGAGAGTAGAGAGCTTCTAGAGAGAGTGAGAGGGAGGGCAAGATAGAGGGGAGGGTGCGCAGGAAGCTGATGAGGCTCCTGTCGTTCGTGCCCTGCGGCTGCCGTGCTGGACCAATCGACGACGCGCCGCCCGCCGCGCTGCCGGCGGCGACCGCCGGCGACGGAGGCGCCGCCGCCAGGAGGCGGCGGAGGAGGGCCAGGTCCCTCGGCGGCTCGCCGCAGTGGCGCCCCTCGCTCGGTGACATCTACGAGGAGTACAGCGCCGCCGGCGCCGCCGACGCCGCAGCAGCCAAGCTCCGCCGCCCCGCCGCCGCCAGAGCCGGCCGGTCCGCCGCCCGCGACGCCGCCAGGGTTCTCCCCCGCGCACACAGCGATGAATACAGGCACATCGAGACGGCGGTGTCCATGCCGGCGTTTGCGCCGGCGGCGTTCCTCTTCTGAACGCGGCGGCGTCGGGTGGCCGGCGATGATGACGAAAAGTAGAGCGACGGCGAACTGTATCAAACATATATATAGACTATTATTTTCTACTTACTGCAGGACTAAGGATTTATATATATGAATCCAGGAAATAATGGTGATCGATCTCTAGCTACTTGTATGTAATTAATATACTTGTGTGTGTTGAAAGATACAATATGGAATTGCATCTGTTGTATATAGTGTATATACGTCATAATTAACATCACAATTGAGGCATGAACATGTCTTGTAATCGAATATCTGGATATAAAGGGACAT]

[+] EMBL CB660731             [ATCCCTGTAAATAGGAGCATACATCTCTCTCCCTTCCTAGAGAGAGAAAGCCATAGCTAGCTAGAGAGAGAAAGCTTAAGAGAGTAGAGAGCTTCTAGAGAGAGTGAGAGGGAGGGCAAGATAGAGGGGAGGGTGCGCAGGAAGCTGATGAGGCTCCTGTCGTTCGTGCCCTGCGGCTGCCGTGCTGGACCAATCGACGACGCGCCGCCCGCCGCGCTGCCGGCGGCGACCGCCGGCGACGGAGGCGCCGCCGCCAGGAGGCGGCGGAGGAGGGCCAGGTCCCTCGGCGGCTCGCCGCAGTGGCGCCCCTCGCTCGGTGACATCTACGAGGAGTACAGCGCCGCCGGCGCCGCCGACGCCGCAGCAGCCAAGCTCCGCCGCCCCGCCGCCGCCAGAGCCGGCCGGTCCGCCGCCCGCGACGCCGCCAGGGTTCTCCCCCGCGCACACAGCGATGAATACAGGCACATCGAGACGGCGGTGTCCATGCCGGCGTTTGCGCCGGCGGCGTTCCTCTTCTGAACGCGGCGGCGTCGGGTGGCCGGCGATGATGACGAAAAGTAGAGCGACGGCGAACTGTATCAAACATATATATAGACTATTATTTTCTACTTACTGCAGGACTAAGGATTTATATATATGAATCCAGGAAATAATGGTGATCGATCTCTAGCTACTTGTATGTAATTAATATACTTGTGTGTGTTGAAAGATACAATATGGAATTGCATCTGTTGTATATAGTGTATATACGTCATAATTAACATCACAAT                                                 ]
[+] EMBL AK107842             [                                                                                               TAGAGAGAGTGAGAGGGAGGGCAAGATAGAGGGGAGGGTGCGCAGGAAGCTGATGAGGCTCCTGTCGTTCGTGCCCTGCGGCTGCCGTGCTGGACCAATCGACGACGCGCCGCCCGCCGCGCTGCCGGCGGCGACCGCCGGCGACGGAGGCGCCGCCGCCAGGAGGCGGCGGAGGAGGGCCAGGTCCCTCGGCGGCTCGCCGCAGTGGCGCCCCTCGCTCGGTGACATCTACGAGGAGTACAGCGCCGCCGGCGCCGCCGACGCCGCAGCAGCCAAGCTCCGCCGCCCCGCCGCCGCCAGAGCCGGCCGGTCCGCCGCCCGCGACGCCGCCAGGGTTCTCCCCCGCGCACACAGCGATGAATACAGGCACATCGAGACGGCGGTGTCCATGCCGGCGTTTGCGCCGGCGGCGTTCCTCTTCTGAACGCGGCGGCGTCGGGTGGCCGGCGATGATGACGAAAAGTAGAGCGACGGCGAACTGTATCAAACATATATATAGACTATTATTTTCTACTTACTGCAGGACTAAGGATTTATATATATGAATCCAGGAAATAATGGTGATCGATCTCTAGCTACTTGTATGTAATTAATATACTTGTGTGTGTTGAAAGATACAATATGGAATTGCATCTGTTGTATATAGTGTATATACGTCATAATTAACATCA                                                     ]
[-] EMBL CB660732             [                                                                                                                     AAGATTGAGGGGAGGGTGCGCAGGAAGCTGATGAGGCTCCTGTCGTTCGTGCCCCGCGGCTGCCGTGCTGGACCAATGGAAGACGCGCCGCCCGCCGCGCTGCCGGCGGCGACCGCCGGCGACGGAGGCGCCGCCGCCAGGAGGCGGCGGAGGAGGGCCAGGTCCCTCGGCGGCTCGCCGCAGTGGCGCCCCTCGCTCGGTGACATCTACGAGGAGTACAGCTCCGCCGGCGCCGCCGACTCCGCAGCAGCCAAGTTCCGCCGCCCCGCCGCCGCCAGAGCCGGCCGGTCCGCCGCCCGGGACGCCGCCAGGGTTTTCCCCCGCGCACACAGCGATGAATACAGGCACATCGAGACGGCGGTGTCCATGCCGGCGTTTGCGCCGGCGGCGTTCCTTTTTTGAACGCGGCGGCGTCGGGTGGCCGGCGATGATGACGAAAAGTAGAGCGACGGCGAACTGTATCAAACATATATATAGACTATTATTTTTTACTTACTGCAGGACTAAGGATTTATATATATGAATCCAGGAAATAATGGTGATCGATCTCTAGCTACTTGTATGTAATTAATATACTTGTGTGTGTTGAAAGATACAATATGGAATTGCATCTGTTGTATATAGTGTATATACGTCATAATTAACATCCCAATTGAGGCATGAACATGTCTTGTAATCGAATATCTGGATATAAAGGGACAT]


>consensus_5902#0 ATCCCTGTAAATAGGAGCATACATCTCTCTCCCTTCCTAGAGAGAGAAAGCCATAGCTAG CTAGAGAGAGAAAGCTTAAGAGAGTAGAGAGCTTCTAGAGAGAGTGAGAGGGAGGGCAAG ATAGAGGGGAGGGTGCGCAGGAAGCTGATGAGGCTCCTGTCGTTCGTGCCCTGCGGCTGC CGTGCTGGACCAATCGACGACGCGCCGCCCGCCGCGCTGCCGGCGGCGACCGCCGGCGAC GGAGGCGCCGCCGCCAGGAGGCGGCGGAGGAGGGCCAGGTCCCTCGGCGGCTCGCCGCAG TGGCGCCCCTCGCTCGGTGACATCTACGAGGAGTACAGCGCCGCCGGCGCCGCCGACGCC GCAGCAGCCAAGCTCCGCCGCCCCGCCGCCGCCAGAGCCGGCCGGTCCGCCGCCCGCGAC GCCGCCAGGGTTCTCCCCCGCGCACACAGCGATGAATACAGGCACATCGAGACGGCGGTG TCCATGCCGGCGTTTGCGCCGGCGGCGTTCCTCTTCTGAACGCGGCGGCGTCGGGTGGCC GGCGATGATGACGAAAAGTAGAGCGACGGCGAACTGTATCAAACATATATATAGACTATT ATTTTCTACTTACTGCAGGACTAAGGATTTATATATATGAATCCAGGAAATAATGGTGAT CGATCTCTAGCTACTTGTATGTAATTAATATACTTGTGTGTGTTGAAAGATACAATATGG AATTGCATCTGTTGTATATAGTGTATATACGTCATAATTAACATCACAATTGAGGCATGA ACATGTCTTGTAATCGAATATCTGGATATAAAGGGACAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)