cluster # 5904

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Oryza sativa
cluster # 5904 cluster # 5904 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5904#0 length = 473 sequences # 3

consensusID : consensus_5904#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 473
fasta sequence

                              [CGCTAGGGTTTCGCCGCCGCCTCTTCGTCCCCGCCGCGACGATGCCGTCCCACAAGACCTTCCGCAT-CAAGAAGAAGCTGGCGAAGAAGATGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGCGGACCGACAACACCAT-CAGGTAT-AACGCGAAGCGCAGGCACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTATTTCTCAGGNTTATTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU031265             [CGCTAGGGTTTCGCCGCCGCCTCTTCGTCCCCGCCGCGACGATGCCGTCCCACAAGACCTTCCGCAT CAAGAAGAAGCTGGCGAAGAAGATGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGCGGACCGACAACACCAT CAGGTAT AACGCGAAGCGCAGGCACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTAaaaaaa                                                                 ]
[+] EMBL AU066227             [         TTCGCCGCCGNCTCTTCGTCCCCGCCGCGACGATGCCGTCCCACAAGACCTTCCGCAT CAAGAAGAAGCTGGCGAAGAAGATGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGCGGACCGACAACACCAT CAGGTAT AACGCGAAGC ATGGCACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTNCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTATTTCTCAGGNTTATTCTGTTTCA                                                ]
[+] EMBL AU164795             [                     ttTTCGTCCCCGCCGCGACGATGCCGTCCCANAAGACCTTCCGCATCCAAGAAGAAGCTGGCGAAGAAGATGCGCCAGAACCGCCCCATCCCCTACTGGATCCGCATGCGGACCGACAACNCCATCCAGGTNTAAACGCGAAGCGCAGGCACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGNGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTATTTCTCAGGCTTATTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_5904#0
CGCTAGGGTTTCGCCGCCGCCTCTTCGTCCCCGCCGCGACGATGCCGTCCCACAAGACCT
TCCGCATCAAGAAGAAGCTGGCGAAGAAGATGCGCCAGAACCGCCCCATCCCCTACTGGA
TCCGCATGCGGACCGACAACACCATCAGGTATAACGCGAAGCGCAGGCACTGGCGCCGCA
CCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATG
GATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTT
TCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCT
GAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTATTTCTCAGGNTTATTCTG
TTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case