cluster # 5932

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Oryza sativa
cluster # 5932 cluster # 5932 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5932#0 length = 1789 sequences # 3
consensusID : consensus_5932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1789
fasta sequence
                              [AGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAAAGCCTCCCTCACTTTCCCCTCCCTCCTGCAAAATCTTTCACTTGCTCCCATGGCCTCCGGCTCAGAGCCTATAGAGTGTCAGGTTCTTGTGCTGAGGGTGTCCATTCATTGTGAAGGATGCAAGAAGAAAGTGAAGAAAGTGCTTCAACATGTTCCTGGAGTGTTCAGATGCGACGTCGATGCCCGGAGCAACAAGGTCATAGTCACGGCCTCAAGAAATATGGACGCCAACATCCTCGTTGCGAAGCTGCGCAAGTCCGGCAAGCAAGCTGAGCCATGGCCAGAGGAGCCAAAGCAGCAGCAGCCACCGCCACCGCCTGCAGAGAGCCAAAGCCAAGAGACTAAGAACCAAAGCGACGAATCCAGCAAGCCGAGTGATCAACCAGCCGAAAAGCCCGGTCCCGACAAAGCTGAAGGCAGCGCAGCGGAGCCAAACAACCCTCAGCCATCGCCAGAGCCGACGAAGAGCACCGATGAGACCCCAAAGCCAAATCAAGAAATCCAGGAGCCATCCAACGCCAAGGCCAACACCGATGCCAACGCCAGTGGCAATGCAAGTGACGAGACCAAGGAAGCAGCAGCAACAGGAGAGCAATCCAGTGAGCCAAAAGGGAAAGTAAAGCAACACCGGGAGAGGCCGATCGATGCGAGGGTGACAATGGAATACGGCGGAGGCAGCCACGTGAACTACATGCCGCAACCGCAGCCGGTGCCCGTCATGAGCTACAATGTGGCACGGCCGACGGCGAGCGCGGCCTACTACGCCGCCCCACCGGCACCGGCGCCGATGTCAATGCCGATGCCCATGGCAAGGCCTGGACCATCATCACAAGGCTACATTGACGAGGAGTACTCGCCTTCCTACTACAACCGTTCATCGCCATATGAGCCTTACTACTATCCTCAACCTTCGCCATACCGCTACCAGCATTATCAGCAATCTTCAGCTGACGACTACTACTATGGAGCACCCCAGCAGAGGAGCGCCTTCTCGCCGCCACGGGATGCTTACGGTGAAATGTTCAATGATGAGAATTCTAATTCTTGCAGTGTGATGTGAAGCAATGCAGTAATTTAGCTAGTTTTATGCTCCTTAACTAGTGACTATATGTTAGATATATAGTAGATTTAGTACCGGTAACCGATGTATTAGTAGTACTCAGGTTTCATGCATGCTACTAGAATAAAATGAGCTGAGCTTGATGCATGAGAGGGAGAATTTGAGGGGTTAATGAACACTTCTGATGTTTATCAGAACAATTTTGTAACACTTGATAACATGGTTATCTCGGAGATGATTCTAAAATATAAGTTGGTATTATGAAAAA]

[+] EMBL AK063326             [AGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAAAGCCTCCCTCACTTTCCCCTCCCTCCTGCAAAATCTTTCACTTGCTCCCATGGCCTCCGGCTCAGAGCCTATAGAGTGTCAGGTTCTTGTGCTGAGGGTGTCCATTCATTGTGAAGGATGCAAGAAGAAAGTGAAGAAAGTGCTTCAACATGTTCCTGGAGTGTTCAGATGCGACGTCGATGCCCGGAGCAACAAGGTCATAGTCACGGCCTCAAGAAATATGGACGCCAACATCCTCGTTGCGAAGCTGCGCAAGTCCGGCAAGCAAGCTGAGCCATGGCCAGAGGAGCCAAAGCAGCAGCAGCCACCGCCACCGCCTGCAGAGAGCCAAAGCCAAGAGACTAAGAACCAAAGCGACGAATCCAGCAAGCCGAGTGATCAACCAGCCGAAAAGCCCGGTCCCGACAAAGCTGAAGGCAGCGCAGCGGAGCCAAACAACCCTCAGCCATCGCCAGAGCCGACGAAGAGCACCGATGAGACCCCAAAGCCAAATCAAGAAATCCAGGAGCCATCCAACGCCAAGGCCAACACCGATGCCAACGCCAGTGGCAATGCAAGTGACGAGACCAAGGAAGCAGCAGCAACAGGAGAGCAATCCAGTGAGCCAAAAGGGAAAGTAAAGCAACACCGGGAGAGGCCGATCGATGCGAGGGTGACAATGGAATACGGCGGAGGCAGCCACGTGAACTACATGCCGCAACCGCAGCCGGTGCCCGTCATGAGCTACAATGTGGCACGGCCGACGGCGAGCGCGGCCTACTACGCCGCCCCACCGGCACCGGCGCCGATGTCAATGCCGATGCCCATGGCAAGGCCTGGACCATCATCACAAGGCTACATTGACGAGGAGTACTCGCCTTCCTACTACAACCGTTCATCGCCATATGAGCCTTACTACTATCCTCAACCTTCGCCATACCGCTACCAGCATTATCAGCAATCTTCAGCTGACGACTACTACTATGGAGCACCCCAGCAGAGGAGCGCCTTCTCGCCGCCACGGGATGCTTACGGTGAAATGTTCAATGATGAGAATTCTAATTCTTGCAGTGTGATGTGAAGCAATGCAGTAATTTAGCTAGTTTTATGCTCCTTAACTAGTGACTATATGTTAGATATATAGTAGATTTAGTACCGGTAACCGATGTATTAGTAGTACTCAGGTTTCATGCATGCTACTAGAATAAAATGAGCTGAGCTTGATGCATGAGAGGGAGAATTTGAGGGGTTAATGAACACTTCTGATGTTTATCAGAACAATTTTGTAACACTTGATAACATGGTTATCTCGGAGATGATTCTAAAATATAAGT               ]
[+] EMBL CF328673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTCACTTTCCCCTCCCTCCTGCAAAATCTTTCACTTGCTCCCATGGCCTCCGGCTCAGAGCCTATAGAGTGTCAGGTTCTTGTGCTGAGGGTGTCCATTCATTGTGAAGGATGCAAGAAGAAAGTGAAGAAAGTGCTTCAACATGTTCCTGGAGTGTTCAGATGCGACGTCGATGCCCGGAGCAACAAGGTCATAGTCACGGCCTCAAGAAATATGGACGCCAACATCCTCGTTGCGAAGCTGCGCAAGTCCGGCAAGCAAGCTGAGCCATGGCCAGAGGAGCCAAAGCAGCAGCAGCCACCGCCACCGCCTGCAGAGAGCCAAAGCCAAGAGACTAAGAACCAAAGCGACGAATCCAGCAAGCCGAGTGATCAACCAGCCGAAAAGCCCGGTCCCGACAAAGCTGAAGGCAGCGCAGCGGAGCCAAACAACCCTCAGCCATCGCCAGAGCCGGCGAAGAGCACCGATGAGACCCCAAAGCCAAATCAAGAAATCCAGGAGCCATCCAACGCCAAGGCCAACACCGATGCCAACGCCAGTGGCAATGCAAGTGACGAGACCAAGGAAGCAGCAGCAACAGGAGAGCAATCCAGTGAGCCAAAAGGGAAAGTAAAGCAACACCGGTAGAGGCCGATCGATGCGAGGGTGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU165005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATACCGCTACCAGCATTATCAGCAATCTTCAGCTGACGACTACTACTATGGAGCACCCCAGCAGAGGAGCGCCTTCTCGCCGCCACGGGATGCTTACGGTGAAATGTTCAATGATGAGAATGCTAATTCTTGCAGTGTGATGTGAAGCAATGCAGTAATTTAGCTAGTTTTATGCTCCTTAACTAGTGACTATATGTTAGATATATAGTAGATTTAGTACCGGTAACCGATGTATTAGTAGTACTCAGGTTTCATGCATGCTACTAGAATAAAATGAGCTGAGCTTGATGCATGAGAAGGAGAATTTGAGGGGTTAATGAACACTTCTGATGTTTATCAGAACAATTTTGTAACACTTGATAACATGGTATTCTCGGAGATGATTCTAAAATGTAAGTTGGTATTATGAAAAA]




>consensus_5932#0
AGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACT
GTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCG
GATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCG
CATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAAC
TCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAAC
TTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCG
ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAA
ATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAAAGCCTCCCTCACTTTCCCC
TCCCTCCTGCAAAATCTTTCACTTGCTCCCATGGCCTCCGGCTCAGAGCCTATAGAGTGT
CAGGTTCTTGTGCTGAGGGTGTCCATTCATTGTGAAGGATGCAAGAAGAAAGTGAAGAAA
GTGCTTCAACATGTTCCTGGAGTGTTCAGATGCGACGTCGATGCCCGGAGCAACAAGGTC
ATAGTCACGGCCTCAAGAAATATGGACGCCAACATCCTCGTTGCGAAGCTGCGCAAGTCC
GGCAAGCAAGCTGAGCCATGGCCAGAGGAGCCAAAGCAGCAGCAGCCACCGCCACCGCCT
GCAGAGAGCCAAAGCCAAGAGACTAAGAACCAAAGCGACGAATCCAGCAAGCCGAGTGAT
CAACCAGCCGAAAAGCCCGGTCCCGACAAAGCTGAAGGCAGCGCAGCGGAGCCAAACAAC
CCTCAGCCATCGCCAGAGCCGACGAAGAGCACCGATGAGACCCCAAAGCCAAATCAAGAA
ATCCAGGAGCCATCCAACGCCAAGGCCAACACCGATGCCAACGCCAGTGGCAATGCAAGT
GACGAGACCAAGGAAGCAGCAGCAACAGGAGAGCAATCCAGTGAGCCAAAAGGGAAAGTA
AAGCAACACCGGGAGAGGCCGATCGATGCGAGGGTGACAATGGAATACGGCGGAGGCAGC
CACGTGAACTACATGCCGCAACCGCAGCCGGTGCCCGTCATGAGCTACAATGTGGCACGG
CCGACGGCGAGCGCGGCCTACTACGCCGCCCCACCGGCACCGGCGCCGATGTCAATGCCG
ATGCCCATGGCAAGGCCTGGACCATCATCACAAGGCTACATTGACGAGGAGTACTCGCCT
TCCTACTACAACCGTTCATCGCCATATGAGCCTTACTACTATCCTCAACCTTCGCCATAC
CGCTACCAGCATTATCAGCAATCTTCAGCTGACGACTACTACTATGGAGCACCCCAGCAG
AGGAGCGCCTTCTCGCCGCCACGGGATGCTTACGGTGAAATGTTCAATGATGAGAATTCT
AATTCTTGCAGTGTGATGTGAAGCAATGCAGTAATTTAGCTAGTTTTATGCTCCTTAACT
AGTGACTATATGTTAGATATATAGTAGATTTAGTACCGGTAACCGATGTATTAGTAGTAC
TCAGGTTTCATGCATGCTACTAGAATAAAATGAGCTGAGCTTGATGCATGAGAGGGAGAA
TTTGAGGGGTTAATGAACACTTCTGATGTTTATCAGAACAATTTTGTAACACTTGATAAC
ATGGTTATCTCGGAGATGATTCTAAAATATAAGTTGGTATTATGAAAAA
clustalw multiple alignements is not computed in this case