Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5945 cluster # 5945       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5945#0 length = 1550 sequences # 1  
consensus_5945#1 length = 1490 sequences # 2  

consensusID : consensus_5945#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1550
fasta sequence
                              [TTGCTCCCGGAAATTCTCTCCCGAACCCGATTTTTTTATTATTCCCCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTTGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTACCTGCTAAGCATGTTTGAAAGTTTTTATTTGTCTACAATCTCAAACTCCCCATTTAGGGTTTTAGGTAGTCTATAGTCTCATATTTGGGAGGTGATGGATAGCTTTGAATTCAAGAGACTCCTTTTCCCCCTAAAAAGCAGTGAGGCAACTGTGCATAAGAAACAGTGAAATAGTTTGAGCATTTTTTTGCAGCATGTTAGTTTAGCTAAGAGCCAACTACAGATAACATATGTTTCAATATGAGGAGTATAAACAGACCCTTTTAAATTTTCCAATGCATATACGTGTTGTTATGCAAGTTTCTGTGAAAACAACACTATATCACCATAGCCATGTCATTTCCCATGTTCTCTTTTACAAGGATAACAGAGAGACTAGAATCAGTCTAGGAACAGTTGTTAATCCTTATATAAGCTCAATTATCAGTACTTGTACCATATTCATATACAGTGCAAGTTGCAAAATACATGGAGG]

[+] EMBL AK106362             [TTGCTCCCGGAAATTCTCTCCCGAACCCGATTTTTTTATTATTCCCCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTTGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTACCTGCTAAGCATGTTTGAAAGTTTTTATTTGTCTACAATCTCAAACTCCCCATTTAGGGTTTTAGGTAGTCTATAGTCTCATATTTGGGAGGTGATGGATAGCTTTGAATTCAAGAGACTCCTTTTCCCCCTAAAAAGCAGTGAGGCAACTGTGCATAAGAAACAGTGAAATAGTTTGAGCATTTTTTTGCAGCATGTTAGTTTAGCTAAGAGCCAACTACAGATAACATATGTTTCAATATGAGGAGTATAAACAGACCCTTTTAAATTTTCCAATGCATATACGTGTTGTTATGCAAGTTTCTGTGAAAACAACACTATATCACCATAGCCATGTCATTTCCCATGTTCTCTTTTACAAGGATAACAGAGAGACTAGAATCAGTCTAGGAACAGTTGTTAATCCTTATATAAGCTCAATTATCAGTACTTGTACCATATTCATATACAGTGCAAGTTGCAAAATACATGGAGG]


>consensus_5945#0 TTGCTCCCGGAAATTCTCTCCCGAACCCGATTTTTTTATTATTCCCCCCCGATATCCTGA TCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTTGAAGCGGA GGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCC TCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTC TCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTAT AGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATA AGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGA GACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGA CTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCG TCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCG GAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAAT GACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTT TCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAA TGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGC ATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCC TGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGAC TGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGA GAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTACCTGC TAAGCATGTTTGAAAGTTTTTATTTGTCTACAATCTCAAACTCCCCATTTAGGGTTTTAG GTAGTCTATAGTCTCATATTTGGGAGGTGATGGATAGCTTTGAATTCAAGAGACTCCTTT TCCCCCTAAAAAGCAGTGAGGCAACTGTGCATAAGAAACAGTGAAATAGTTTGAGCATTT TTTTGCAGCATGTTAGTTTAGCTAAGAGCCAACTACAGATAACATATGTTTCAATATGAG GAGTATAAACAGACCCTTTTAAATTTTCCAATGCATATACGTGTTGTTATGCAAGTTTCT GTGAAAACAACACTATATCACCATAGCCATGTCATTTCCCATGTTCTCTTTTACAAGGAT AACAGAGAGACTAGAATCAGTCTAGGAACAGTTGTTAATCCTTATATAAGCTCAATTATC AGTACTTGTACCATATTCATATACAGTGCAAGTTGCAAAATACATGGAGG



consensusID : consensus_5945#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1490
fasta sequence
                              [CCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTCGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTTGATTATAACAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCATGGTTTAATGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGTTGGATTGGGTGTTGGCCTGCTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGGCGATTGCCCTGATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTAGGGAACTAACTGTCCAACCATCTTTCCTGTTCATGC-TTGTGGTAGATAT-AAGTGAGGC-TTTTTGTTCTTCGATTCTGCAGTCACTCTGGAATCTGTTGCTCTC-TTGTCTGCAA-TGCCAATCA-TTTTTGCTCCCTTGAGA-TGTAAATATTAGTCTGTATGGCAAATAAAGAGTCGAATC]

[+] EMBL AK066707             [CCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTCGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTTGATTATAACAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCATGGTTTAATGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGTTGGATTGGGTGTTGGCCTGCTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGGCGATTGCCCTGATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTAGGGAACTAACTGTCCAACCATCTTTCCTGTTCATGC TTGTGGTAGATAT AAGTGAGGC TTTTTGTTCTTCGATTCTGCAGTCACTCTGGAATCTGTTGCTCTC TTGTCTGCAA TGCCAATCA TTTTTGCTCCCTTGAGA TGTAAATATTAGTCTGTATGGCAAATAAAGAGTCGAATC]
[+] EMBL OSC29161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGTTAAATGAGGACTCTTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTTGATTATAACAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCATGGTTTAATGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTNGGTGTTGGATTGGGTGTTGGCCTACTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGGCGATTGCCCTNATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTAGGGAACTAACTGTCCAACCATCTTTCCTGTTCATGCTTTTTNGTAGATATAAAGTNAGGCTTTTTTGTTCTTCGTTTCTGCAGTCACTCTGGAATCTGTTGCTCTCTTTGTCTGCAANTGCCAATCANTTTTTGCTCCCTTGAGATTGTAAAaa                               ]


>consensus_5945#1 CCCCCGATATCCTGATCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCC CCGCCTCGAAGCGGAGGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTG ACGGCGACGGCCTCCTCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCG CGCGGCCTCCGTGTCTCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGC TGTCCTATAGGCTATAGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATC CGTGTCGGCGTGATAAGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGA TGAGGTGGCTTTTGAGACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTC TTCGCCGTGGCTTGACTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGA GTCTGCGCCGGACCGTCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGA GGTGAATGGTCAGCGGAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGA CAGGGTTGACAAAATGACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGAC AGGGAGTGTCAGGTTTCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGA GTTGTGCAGTGCCAATGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATAT GAAGTGCCAACCAGCATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTC AGAGTCTGTACATCCTGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTAT TATATTAACAAAGACTGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCT TGATTCCATCCCTGAGAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTC TTTGCAGGTATCAGAATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTTGATTATAA CAGCTTGTACTCGAGGCAGGACTTTATAGAGGGCGAGGACGGTGAGCTTTCATGGTTTAA TGCTGGTGTCCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGTTGGATTGGG TGTTGGCCTGCTGGTCCGGACGTACCAAAGCACCAGTAGGAACTTCAGGCGGCGATTGCC CTGATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTAGGGAACTA ACTGTCCAACCATCTTTCCTGTTCATGCTTGTGGTAGATATAAGTGAGGCTTTTTGTTCT TCGATTCTGCAGTCACTCTGGAATCTGTTGCTCTCTTGTCTGCAATGCCAATCATTTTTG CTCCCTTGAGATGTAAATATTAGTCTGTATGGCAAATAAAGAGTCGAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5945#0      TTGCTCCCGGAAATTCTCTCCCGAACCCGATTTTTTTATTATTCCCCCCCGATATCCTGA 60
consensus_5945#1      ---------------------------------------------CCCCCGATATCCTGA 15
                                                                   ***************

consensus_5945#0      TCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTTGAAGCGGA 120
consensus_5945#1      TCCGGCCGCCACCGCCGCCTCCGCCCCCTCGCCGCCGCCGGAGCCCCGCCTCGAAGCGGA 75
                      *************************************************** ********

consensus_5945#0      GGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCC 180
consensus_5945#1      GGAGCCATCCCGCGCTCGTCGGAGGCACCGGTGTGTGTGTGTGTGACGGCGACGGCCTCC 135
                      ************************************************************

consensus_5945#0      TCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTC 240
consensus_5945#1      TCCCCGCACGCGCACGTCGGCGAGAAGGTCTGGTGGGGCGACGCGCGCGGCCTCCGTGTC 195
                      ************************************************************

consensus_5945#0      TCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTAT 300
consensus_5945#1      TCTCGGCTTGGATTGGAATCGAATTGAAGATGCTGGAACTGGAGCTGTCCTATAGGCTAT 255
                      ************************************************************

consensus_5945#0      AGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATA 360
consensus_5945#1      AGAAAGAGAAATTTATTCATGTAGTGTAATACATATGTTTGGATCCGTGTCGGCGTGATA 315
                      ************************************************************

consensus_5945#0      AGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGA 420
consensus_5945#1      AGGAATCGTGTCGAATTGGTACCAGAAGGTTGAAAAGATGGCTGATGAGGTGGCTTTTGA 375
                      ************************************************************

consensus_5945#0      GACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGA 480
consensus_5945#1      GACTGCCAGGAAGATCATCATGCACCCGCTTTATACGCCGAGGTCTTCGCCGTGGCTTGA 435
                      ************************************************************

consensus_5945#0      CTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCG 540
consensus_5945#1      CTTGAAGGTGTTCTATGTAAGGGTGAGCAATTGCGAGGTGGATGAGTCTGCGCCGGACCG 495
                      ************************************************************

consensus_5945#0      TCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCG 600
consensus_5945#1      TCTCACGCTCAACCACATCCCGCTGTCTCCCGATACGGTTATCGAGGTGAATGGTCAGCG 555
                      ************************************************************

consensus_5945#0      GAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAAT 660
consensus_5945#1      GAGTAGCATGCACACCGAGTTCATCTCTTCATCCCTCAGGAGGGACAGGGTTGACAAAAT 615
                      ************************************************************

consensus_5945#0      GACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTT 720
consensus_5945#1      GACCGAGGAGGCTACATTCGTGAGCACAGATAGTATAAGGATGACAGGGAGTGTCAGGTT 675
                      ************************************************************

consensus_5945#0      TCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAA 780
consensus_5945#1      TCAGGTGTTCGATAAGAACGATCTGCTGCTCACAGGCGACCTAGAGTTGTGCAGTGCCAA 735
                      ************************************************************

consensus_5945#0      TGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGC 840
consensus_5945#1      TGGAGTTGTCGGGGAATCGAAGAACAGCAGCAAGAGATGGAATATGAAGTGCCAACCAGC 795
                      ************************************************************

consensus_5945#0      ATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCC 900
consensus_5945#1      ATCATCATGCAATGGTTTTCTCAAGGGGAAGCCGTCCACAGCTTCAGAGTCTGTACATCC 855
                      ************************************************************

consensus_5945#0      TGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGAC 960
consensus_5945#1      TGTGATAGAGGTTTATCTTGCTGGCACTTTCTGTGGCACACCTATTATATTAACAAAGAC 915
                      ************************************************************

consensus_5945#0      TGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGA 1020
consensus_5945#1      TGTGCAGCATATATCACGGAGGAAATCCCAAATGAAACTAAAGCTTGATTCCATCCCTGA 975
                      ************************************************************

consensus_5945#0      GAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTACCTGC 1080
consensus_5945#1      GAATGAGGCAACTGAACAACAAAAAGAAGAGTTAAATGAGGACTCTTTGCAGGTATCAGA 1035
                      ******************************************************* * * 

consensus_5945#0      TAAGCATGTTTGAAAGTTTTTATTTGTCTACAATCTCAAACTCCCCATTTAGGGTTTTAG 1140
consensus_5945#1      ATCACAGAATCCCAAATCTGAGCAAGATGTGGATGTTGATTATAACAGCTTGTACTCGAG 1095
                          **   *   ** * *      *      ** *  *      **  * *   *  **

consensus_5945#0      GTAGTCTATAGTCTCATATTTGGGAGGTGATGGATAGCTTTGAATTCAAGAGACTCCTTT 1200
consensus_5945#1      GCAG-----GACTTTATAGA-GGGCGAGGACGGTGAGCTTTCATGGTTTAATGCTGGTGT 1149
                      * **         * ***   *** *  ** **  ****** *       *  **  * *

consensus_5945#0      TCCCCCTAAAAAGCAGTGAGGCAACTGTGCATAAGAAACAGTGAAATAGTTTGAGCATTT 1260
consensus_5945#1      CCGAGTTGGGGTTGGGATTGGCCTTGGTATTTGTGTGGGTGT----TGGATTGGGTGTTG 1205
                       *    *        *   ***    **   *  *     **    * * *** *  ** 

consensus_5945#0      TTTTGCAGCATGTTAGTTTAGCTAAGAGCCAACTACAGATAACATATGTTTCAATATGAG 1320
consensus_5945#1      GCCTGCTG-GTCCGGACGTACCAAAGCACCAG---TAGGAACTTCAGGCGGCGAT-TGCC 1260
                         *** *  *       ** * ***  ***     **  *    * *   * ** **  

consensus_5945#0      GAGTATAAACAGACCCTTTTAAATTTTCCAATGCATATACGTGTTGTTATGCAAGTTTCT 1380
consensus_5945#1      CTG-ATGGCCAGACCACCCCATGAATGTAGATGTGTCTTTATCTTGTTCTGTAGGGAACT 1319
                        * **   ******     *    *    ***  * *   * ***** ** * *   **

consensus_5945#0      GTGAAAACAACACTATATCAC---CATAGCCATGTCATTTCCCA-TGTTCTCTTTTACAA 1436
consensus_5945#1      AACTGTCCAACCATCTTTCCTGTTCATGCTTGTGGTAGATATAAGTGAGGCTTTTTGTT- 1378
                             ****  * * **     ***     **  *  *   * **     ****    

consensus_5945#0      GGATAACAGAGAGACTAGAATCAGTCTAGGAACAGTTGTTAATCCTTATATAAGCTCAAT 1496
consensus_5945#1      ------CTTCGATTCTGCAGTCACTCTGGAATCTGTTGCTCTCTTGTCTGCAATGCCAAT 1432
                            *   **  **  * *** *** * * * **** *      * *  **   ****

consensus_5945#0      TATCAGTACTTGTACCATATTCATATAC-AGTGCAAGTTGCAAAATACATGGAGG--- 1550
consensus_5945#1      CATTTTTGCTCCCTTGAGATGTAAATATTAGTCTGTATGGCAAATAAAGAGTCGAATC 1490
                       **   * **      * **  * ***  ***     * *****  *   *  *    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)