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Oryza sativa
cluster # 5951 cluster # 5951       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5951#0 length = 2504 sequences # 2  
consensus_5951#1 length = 667 sequences # 1  

consensusID : consensus_5951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2504
fasta sequence
                              [CCCAAATCCCTCCTCCCCATCGCGGCGCTGCCGCCGCTCCTCCTCCGGCAGCCAGCCATGGCCACGGTCACGCCGGGGGTGCTGCTCAAGCTGCTGCAGGCGATGCACACCGACGACCGCGTCGCCGGCGACCACCGCTCCCACGTCCTCCAGGTCACGGCCGTAGTCCCCGCCCTCACCGCCTCCACCGCCGACTCCCTCTGGCCCTCCAACGGCTTCCTCCTCCAGCTCTCCGACGGCCTCCACTCCACCTACGTCCAGCCATCCTCCGCCGACGCCGACGCCCTCGTCTCCGCGCGCCCGCAACTCGTCGGCCACCTCGTCCACCTCGACCGCCTCCGCTTCGCCCGCCCGGTGCCCCGCGCCGTCGGGATCCGCCCCGTCCCGTCCTCCCGCAGCGTCTCCTTCGTAGGAAACCCGGAGCCGCTCGTCGCCCGCCCCGCCGCGTGCTCCCGCGGCTACGTCATCCAGCCCGGGTCCCACTCCGACTCCGCGCCGCCGCTCATGCCATCCAGTTCCGGCAATGCGGTGCAGTCCGATGCAACGGATGCCGTCAAGAGGATTGTTCTCGCGCCCAAGAGCGTCTCCGAGGCCGCGCCGCCGCCCGCCGTTTCAGCCGCCAAGAGGCGGTTCTCGTCTCCGGCGCCGTCCAAGCAGCGAGATCCGTCGCCTTCGGTCAAGGGCGGCGCGTCACGGCCTTCGTCGCCCTCGGTGAAGGGCGCTTCCCGAGCGTCCTCACCTGCGGTCAGGGGCACGCCCAGGGCGACGTCACCAGCGCCTTCCAAATGCGTGGTGCCCAGCCTTGTTTCGGCCAAGGAGGAGAATCGCCGCACGGCGAGGGAGCCAGCGATTATCGTGCCATCGAGGTACAGGCAGCCGTCACCGGTAGGAGGGAGGAGAGGGGCGGCGTCGCCCGCACCCGGTGGGAGGCGCGCGTCACTGTCTCCTAGCTCCCGGAGGCTGTCCGGGGAAGGTAGCAGCAAGAAGAAGGTCGGGGTGTTGGTGGCTGGTATCTCCAAGATGACGGATTTGACGAATGGGTCGGCTGTTAAGCCGGGGAGGAAGAGCTGGGACAATACCTCAATCGCAGCAGCGGCTGGCTCTGTGATGAAATCGAAGGTCAAGGTGGATAAGAGTACTATTCTGAGGACACAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCCAGTAACGATGATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCAAAAATTATGCTTCATGATCCTAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGAAGCCACTGAACGAAGAGACGCAGCAGCAATTGCTGCAGCTGATGCTCTCCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCTAAGTAAATTTTCTGAACTTACTTCAGCATCGAAGACCTCCAATCCCCTTCCAACAGTTGATATCTTCCTTGCTGTCTATGAGGATACTCTCAAATGGAAGAAAATTGCTGAGTCTATATCCACCAATAGAACTGAAACTGCATCATGGGAGAATTCAGCTACTCATTGGGTTGAAGCAGCATTGGCAACTGATCTTGAAGTCCTAAAGTTGATGAATAAGGCACCTGAATCGCTCTCTCGGAAAAGGGGTGCTGATAAGCCAAAGGCTCCCTCGGTGGTAGAAGCTCCAAGAACAACCATATCCAAGAGGCAATCACATGGGACTTCTGCAAAGGTCCAGTCAAAGGTCTTACCGACCTCTACAGCGAGCTGCGCATGGAACAAAACTCAGGGCGTGAATGAGACGGCTGAGCTTGCCACGACCTTGTGCCGTGAGATGCATACGTGGTTCCTGAAATTTGTGGACGAGGCAATGGATTTGGGTTTCCACCTTTTTGAAGATCAGAATGTTGCAAGTAGGGGAAAGCAGAGCAGCCACATAACAATGGTACTGTCCCAGTTCAAGAAGATCAGTGACTGGTTGGATGGAGTAGGCAAGATTGCAGAAGAGGCTACAACTAAGGATAAGGTTGAGCAGTTGAAGTGCAAGATTTACGGGTTCGTCATCAATCACATGGGATCTGCATTTGATAGCTCGGTCTCGATTTCATCAAGGAATTGAGGAATGCTTAAAGTAAGCCTTTAAGTTTCTTCTCTTTTATTTTTGTTCATTGGGGATGGGATCAAAGCTACATAATTCTATGACGAGAGGTCTGCTACAGTTTGTAGAAGCTACTCCTTCAGTTATTACCTTTGGTTTTGCCTTGTGAATAAGTTGTTTGTGAAATGGTTCTTGTTTTATCGGTTACAATTATGTACACTTGATAGTTTAGCTTGCTGTAGTCTGAGTGAATGACTGACTTGTTAAAGCTACAAGATATCATTCTTACATCCTTGCAAATATTGTGCTAGGATTAATGGTATGTTAATTTGATTGGTGCC]

[+] EMBL AK101734             [CCCAAATCCCTCCTCCCCATCGCGGCGCTGCCGCCGCTCCTCCTCCGGCAGCCAGCCATGGCCACGGTCACGCCGGGGGTGCTGCTCAAGCTGCTGCAGGCGATGCACACCGACGACCGCGTCGCCGGCGACCACCGCTCCCACGTCCTCCAGGTCACGGCCGTAGTCCCCGCCCTCACCGCCTCCACCGCCGACTCCCTCTGGCCCTCCAACGGCTTCCTCCTCCAGCTCTCCGACGGCCTCCACTCCACCTACGTCCAGCCATCCTCCGCCGACGCCGACGCCCTCGTCTCCGCGCGCCCGCAACTCGTCGGCCACCTCGTCCACCTCGACCGCCTCCGCTTCGCCCGCCCGGTGCCCCGCGCCGTCGGGATCCGCCCCGTCCCGTCCTCCCGCAGCGTCTCCTTCGTAGGAAACCCGGAGCCGCTCGTCGCCCGCCCCGCCGCGTGCTCCCGCGGCTACGTCATCCAGCCCGGGTCCCACTCCGACTCCGCGCCGCCGCTCATGCCATCCAGTTCCGGCAATGCGGTGCAGTCCGATGCAACGGATGCCGTCAAGAGGATTGTTCTCGCGCCCAAGAGCGTCTCCGAGGCCGCGCCGCCGCCCGCCGTTTCAGCCGCCAAGAGGCGGTTCTCGTCTCCGGCGCCGTCCAAGCAGCGAGATCCGTCGCCTTCGGTCAAGGGCGGCGCGTCACGGCCTTCGTCGCCCTCGGTGAAGGGCGCTTCCCGAGCGTCCTCACCTGCGGTCAGGGGCACGCCCAGGGCGACGTCACCAGCGCCTTCCAAATGCGTGGTGCCCAGCCTTGTTTCGGCCAAGGAGGAGAATCGCCGCACGGCGAGGGAGCCAGCGATTATCGTGCCATCGAGGTACAGGCAGCCGTCACCGGTAGGAGGGAGGAGAGGGGCGGCGTCGCCCGCACCCGGTGGGAGGCGCGCGTCACTGTCTCCTAGCTCCCGGAGGCTGTCCGGGGAAGGTAGCAGCAAGAAGAAGGTCGGGGTGTTGGTGGCTGGTATCTCCAAGATGACGGATTTGACGAATGGGTCGGCTGTTAAGCCGGGGAGGAAGAGCTGGGACAATACCTCAATCGCAGCAGCGGCTGGCTCTGTGATGAAATCGAAGGTCAAGGTGGATAAGAGTACTATTCTGAGGACACAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCCAGTAACGATGATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCAAAAATTATGCTTCATGATCCTAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGAAGCCACTGAACGAAGAGACGCAGCAGCAATTGCTGCAGCTGATGCTCTCCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCTAAGTAAATTTTCTGAACTTACTTCAGCATCGAAGACCTCCAATCCCCTTCCAACAGTTGATATCTTCCTTGCTGTCTATGAGGATACTCTCAAATGGAAGAAAATTGCTGAGTCTATATCCACCAATAGAACTGAAACTGCATCATGGGAGAATTCAGCTACTCATTGGGTTGAAGCAGCATTGGCAACTGATCTTGAAGTCCTAAAGTTGATGAATAAGGCACCTGAATCGCTCTCTCGGAAAAGGGGTGCTGATAAGCCAAAGGCTCCCTCGGTGGTAGAAGCTCCAAGAACAACCATATCCAAGAGGCAATCACATGGGACTTCTGCAAAGGTCCAGTCAAAGGTCTTACCGACCTCTACAGCGAGCTGCGCATGGAACAAAACTCAGGGCGTGAATGAGACGGCTGAGCTTGCCACGACCTTGTGCCGTGAGATGCATACGTGGTTCCTGAAATTTGTGGACGAGGCAATGGATTTGGGTTTCCACCTTTTTGAAGATCAGAATGTTGCAAGTAGGGGAAAGCAGAGCAGCCACATAACAATGGTACTGTCCCAGTTCAAGAAGATCAGTGACTGGTTGGATGGAGTAGGCAAGATTGCAGAAGAGGCTACAACTAAGGATAAGGTTGAGCAGTTGAAGTGCAAGATTTACGGGTTCGTCATCAATCACATGGGATCTGCATTTGATAGCTCGGTCTCGATTTCATCAAGGAATTGAGGAATGCTTAAAGTAAGCCTTTAAGTTTCTTCTCTTTTATTTTTGTTCATTGGGGATGGGATCAAAGCTACATAATTCTATGACGAGAGGTCTGCTACAGTTTGTAGAAGCTACTCC                                                                                                                                                                                                           ]
[+] EMBL AK105399             [                       ctccccatCGCGGCTCCTCCTCCGGCAGCCAGCCATGGCCACGGTCACGCCGGGGGTGCTGCTCAAGCTGCTCCAGGCGATGCACACCGACGACCGCGTCGCCGGCGACCACCGCTCCCCCGTCCTCCAGGTCACCGCCGTCGTCCCCGCCCTCACCGCCTCCACCGCCGACTCCCTCTGGCCCTCCAACGGCTTCCTCCTCCAGCTCTCCGACGGCCTCCACTCCACCTACGTCCAGCCCTCCTCCGCCGACGCCGACGCCCTCGTCTCCGCGCGCCCGCAACTCGTCGGCCACCTCGTCCACCTCGACCGCCTCCGCTTCGCCCGCCCGGTGCCCCGCGCCGTCGGGATCCGCCCCGTCCCGTCCTCTCGCAGCGTCTCCTTCGTCGGCAACCCGGAGCCGCTCGTCGCCCGCCCCGCCGCGTGCTCCCGCGGCTACGTCATCCAGCCCGGGTCCCACTCCGACGCCGCGCCGCCGCTCATGCCATCCAGTTCCGGCAATGCGGCGCAGTCCGATGCAACGAATGCCATCAATAGGACGGTTCTCGCGCACAAGAACGTCCCCGAGGCCGCGCCGCCGCCCGCCGTTTCAGCCGCCAAGAGGCGGTTCTCGTCTCCGGCGCCGTCCAAGCAGCGAGATCCGTCGCCTTCGGTCAAGGGCGGCGCGTCACGGCCTTCGTCGCCCTCGGTGAAGGGCGCCTCCCGAGCGTCCTCACCTGCGGTCAGGGGCACGCCCAGGGCGACGTCACCAGCGCCGTCCAAATGCGTGGTGCCCAGCCTTGTTGCGGCCAAGGAGGAGAATCGCCGCACGGCGAGGGAGCCGGCGATTATCGTGCCATCAAGGTACAGGCAGCCGTCACCAGTAGGAGGGAGGAGAGGGGCGGGGTCGCCCGCACCCGGTGGGAGGCGCGCGTCACTGTCGCCTAGCTCCCGGAGGCTGTCCGGGGAAGGTAGCAGCAAGAAGAAGGTCGGGGTGTTGGTGGCTGGTATCTCCAAGATGACGGATTTGACGAATGGGTCGGCTGTTAAGCCGGGGAGGAAGAGCTGGGACAATACCTCAATCGCAGCAGCGGCTGGCTCTGTGATGAAATCGAAGGTCAAGGTGGATAAGAGTACTATTCTGAGGACACAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCCAGTAACGATGATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCAAAAATTATGCTTCATGATCCTAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGAAGCCACTGAACGAAGAGACGCAGCAGCAATTGCTGCAGCTGATGCTCTGCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCTAAGTAAATTTTCTGAACTAACTTCAGCATCGAAGACCTCCAATCCCCTTCCAACAGTTGATATCTTCCTTGCTGTCTATGAGGATACTCTCAAATGGAAGAAAATTGCTGAGTCTATATCCACCAATAGAACTGAAACTGCATCATGGGAGAATTCAGTTACTCATTGGGTTGAAGCAGCATTGGCAACTGATCTTGAAGTCCTAAAGTTGATGAATAAGGCACCTGAATCGCTCTCTCGGAAAAGGGGTGCTGATAAGCCAAAGGCTCCCTTGGTGGTAGAAGCTCCAAGAACAACCATATCCAAGAGGCAATCACATGGGACTTCTGCAAAGGTCCAGTCAAAGGTCTTACCGACCTCTTCAGCGAGCTGCGCATGGAACAAAACTCAGGGCGTGAATGAGACGGCTGAGCTTGCCACGACCTTGTGCTGTGAGATGCATACGTGGTTCCTGAAATTTGTGGACGAGGCAATGGATTTAGGTTTCCACCTTTTTGAAGATCAGAATGTTGCAAGTAGGGGAAAGCAGAGCAGCCACATAACAATGGTACTGTCCCAGTTCAAGAAGATCAGTGACTGGTTGGATGGAGTAGGCAAGATTGCAGAAGAGGCTACAACTAAGGATAAGGTTGAGCAGTTGAAGTGCAAGATTTATGGGTTCGTCATCAATCACATGGGATCTGCATTTGATAGCTCGGTCTCGATTTCATCAAGGAATTGAGGAATGCTTAAAGTAAGCCTTTAAGTTTCTTCTCTTGTATTTTTGTTCATTGGGGATGGGATCAAAGCTACATAATTCTATGACGAGAGGTCTGCTACAGTTTGTAGAAGCTACTCCTTCAGTTATTACCTTTGGTTTTGCCTTGTGAATAAGTTGTTTGTGAAATGGTTCTTGTTTTATCGGTTACAATTATGTACACTTGATAGTTTAGCTTGCTGTAGTCTGAGTGAATGACTGACTTGTTAAAGCTACAAGATATCATTCTTACATCCTTGCAAATATTGTGCTAGGATTAATGGTATGTTAATTTGATTGGTGCC]


>consensus_5951#0 CCCAAATCCCTCCTCCCCATCGCGGCGCTGCCGCCGCTCCTCCTCCGGCAGCCAGCCATG GCCACGGTCACGCCGGGGGTGCTGCTCAAGCTGCTGCAGGCGATGCACACCGACGACCGC GTCGCCGGCGACCACCGCTCCCACGTCCTCCAGGTCACGGCCGTAGTCCCCGCCCTCACC GCCTCCACCGCCGACTCCCTCTGGCCCTCCAACGGCTTCCTCCTCCAGCTCTCCGACGGC CTCCACTCCACCTACGTCCAGCCATCCTCCGCCGACGCCGACGCCCTCGTCTCCGCGCGC CCGCAACTCGTCGGCCACCTCGTCCACCTCGACCGCCTCCGCTTCGCCCGCCCGGTGCCC CGCGCCGTCGGGATCCGCCCCGTCCCGTCCTCCCGCAGCGTCTCCTTCGTAGGAAACCCG GAGCCGCTCGTCGCCCGCCCCGCCGCGTGCTCCCGCGGCTACGTCATCCAGCCCGGGTCC CACTCCGACTCCGCGCCGCCGCTCATGCCATCCAGTTCCGGCAATGCGGTGCAGTCCGAT GCAACGGATGCCGTCAAGAGGATTGTTCTCGCGCCCAAGAGCGTCTCCGAGGCCGCGCCG CCGCCCGCCGTTTCAGCCGCCAAGAGGCGGTTCTCGTCTCCGGCGCCGTCCAAGCAGCGA GATCCGTCGCCTTCGGTCAAGGGCGGCGCGTCACGGCCTTCGTCGCCCTCGGTGAAGGGC GCTTCCCGAGCGTCCTCACCTGCGGTCAGGGGCACGCCCAGGGCGACGTCACCAGCGCCT TCCAAATGCGTGGTGCCCAGCCTTGTTTCGGCCAAGGAGGAGAATCGCCGCACGGCGAGG GAGCCAGCGATTATCGTGCCATCGAGGTACAGGCAGCCGTCACCGGTAGGAGGGAGGAGA GGGGCGGCGTCGCCCGCACCCGGTGGGAGGCGCGCGTCACTGTCTCCTAGCTCCCGGAGG CTGTCCGGGGAAGGTAGCAGCAAGAAGAAGGTCGGGGTGTTGGTGGCTGGTATCTCCAAG ATGACGGATTTGACGAATGGGTCGGCTGTTAAGCCGGGGAGGAAGAGCTGGGACAATACC TCAATCGCAGCAGCGGCTGGCTCTGTGATGAAATCGAAGGTCAAGGTGGATAAGAGTACT ATTCTGAGGACACAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCC AGTAACGATGATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCA CCTGCAGTAAAGACGAAAGCAATGGCTCCAAAAATTATGCTTCATGATCCTAAATGGACC GATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGAAGCC ACTGAACGAAGAGACGCAGCAGCAATTGCTGCAGCTGATGCTCTCCAGGAGGCATTAATC ACTGAATCCGTAATCAGGAACCTAAGTAAATTTTCTGAACTTACTTCAGCATCGAAGACC TCCAATCCCCTTCCAACAGTTGATATCTTCCTTGCTGTCTATGAGGATACTCTCAAATGG AAGAAAATTGCTGAGTCTATATCCACCAATAGAACTGAAACTGCATCATGGGAGAATTCA GCTACTCATTGGGTTGAAGCAGCATTGGCAACTGATCTTGAAGTCCTAAAGTTGATGAAT AAGGCACCTGAATCGCTCTCTCGGAAAAGGGGTGCTGATAAGCCAAAGGCTCCCTCGGTG GTAGAAGCTCCAAGAACAACCATATCCAAGAGGCAATCACATGGGACTTCTGCAAAGGTC CAGTCAAAGGTCTTACCGACCTCTACAGCGAGCTGCGCATGGAACAAAACTCAGGGCGTG AATGAGACGGCTGAGCTTGCCACGACCTTGTGCCGTGAGATGCATACGTGGTTCCTGAAA TTTGTGGACGAGGCAATGGATTTGGGTTTCCACCTTTTTGAAGATCAGAATGTTGCAAGT AGGGGAAAGCAGAGCAGCCACATAACAATGGTACTGTCCCAGTTCAAGAAGATCAGTGAC TGGTTGGATGGAGTAGGCAAGATTGCAGAAGAGGCTACAACTAAGGATAAGGTTGAGCAG TTGAAGTGCAAGATTTACGGGTTCGTCATCAATCACATGGGATCTGCATTTGATAGCTCG GTCTCGATTTCATCAAGGAATTGAGGAATGCTTAAAGTAAGCCTTTAAGTTTCTTCTCTT TTATTTTTGTTCATTGGGGATGGGATCAAAGCTACATAATTCTATGACGAGAGGTCTGCT ACAGTTTGTAGAAGCTACTCCTTCAGTTATTACCTTTGGTTTTGCCTTGTGAATAAGTTG TTTGTGAAATGGTTCTTGTTTTATCGGTTACAATTATGTACACTTGATAGTTTAGCTTGC TGTAGTCTGAGTGAATGACTGACTTGTTAAAGCTACAAGATATCATTCTTACATCCTTGC AAATATTGTGCTAGGATTAATGGTATGTTAATTTGATTGGTGCC



consensusID : consensus_5951#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence
                              [TTTTTTTTTTTTTTGAGGAAAGAGAGAATTGAAAACACTGTTATTTATTTTCTTTCCAGATACAATGGCAGCTAGTTTGTAATCTTTGAATTTGACTCAGGGACATACCCTTCCCTACCATCATCACATTTTTGTGTTACTGCAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCCAGTAACGATCATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCCAAAATTATGCTTCATGATCCTAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGTAAGCACTCCCAATTCATCTTTGTTAGCAATGATCAAGTCGCAGTTCATTGATCCTTGAAACACCACCTCTTCTCTGAATTTGCAGGAAGCCACTGAACGAACAGACGCACCACCAATTGCTGCAACTGATGCTCTGCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCTAAGGTAATTAAAAGCCGACTTGTGTCCCCGGAATTTCACTCAGCACAAAAGTGGTTTTTCCTAACACTCAGCTTGCTATTGTCCACAGTAAATTTTCTGAACTAACTTCAGCATCGGNGACCTCCAA]

[+] EMBL CA762313             [TTTTTTTTTTTTTTGAGGAAAGAGAGAATTGAAAACACTGTTATTTATTTTCTTTCCAGATACAATGGCAGCTAGTTTGTAATCTTTGAATTTGACTCAGGGACATACCCTTCCCTACCATCATCACATTTTTGTGTTACTGCAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCCAGTAACGATCATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCCAAAATTATGCTTCATGATCCTAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGTAAGCACTCCCAATTCATCTTTGTTAGCAATGATCAAGTCGCAGTTCATTGATCCTTGAAACACCACCTCTTCTCTGAATTTGCAGGAAGCCACTGAACGAACAGACGCACCACCAATTGCTGCAACTGATGCTCTGCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCTAAGGTAATTAAAAGCCGACTTGTGTCCCCGGAATTTCACTCAGCACAAAAGTGGTTTTTCCTAACACTCAGCTTGCTATTGTCCACAGTAAATTTTCTGAACTAACTTCAGCATCGGNGACCTCCAA]


>consensus_5951#1 TTTTTTTTTTTTTTGAGGAAAGAGAGAATTGAAAACACTGTTATTTATTTTCTTTCCAGA TACAATGGCAGCTAGTTTGTAATCTTTGAATTTGACTCAGGGACATACCCTTCCCTACCA TCATCACATTTTTGTGTTACTGCAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAAC AGAACTATCCAGTAACGATCATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAA GATAGAGTCACCTGCAGTAAAGACGAAAGCAATGGCTCCCAAAATTATGCTTCATGATCC TAAATGGACCGATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGG AAAGGTAAGCACTCCCAATTCATCTTTGTTAGCAATGATCAAGTCGCAGTTCATTGATCC TTGAAACACCACCTCTTCTCTGAATTTGCAGGAAGCCACTGAACGAACAGACGCACCACC AATTGCTGCAACTGATGCTCTGCAGGAGGCATTAATCACTGAATCCGTAATCAGGAACCT AAGGTAATTAAAAGCCGACTTGTGTCCCCGGAATTTCACTCAGCACAAAAGTGGTTTTTC CTAACACTCAGCTTGCTATTGTCCACAGTAAATTTTCTGAACTAACTTCAGCATCGGNGA CCTCCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5951#0      CCCAAATCCCTCCTCCCCATCGCGGCGCTGCCGCCGCTCCTCCTCCGGCAGCCAGCCATG 60
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCCACGGTCACGCCGGGGGTGCTGCTCAAGCTGCTGCAGGCGATGCACACCGACGACCGC 120
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GTCGCCGGCGACCACCGCTCCCACGTCCTCCAGGTCACGGCCGTAGTCCCCGCCCTCACC 180
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCCTCCACCGCCGACTCCCTCTGGCCCTCCAACGGCTTCCTCCTCCAGCTCTCCGACGGC 240
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CTCCACTCCACCTACGTCCAGCCATCCTCCGCCGACGCCGACGCCCTCGTCTCCGCGCGC 300
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CCGCAACTCGTCGGCCACCTCGTCCACCTCGACCGCCTCCGCTTCGCCCGCCCGGTGCCC 360
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CGCGCCGTCGGGATCCGCCCCGTCCCGTCCTCCCGCAGCGTCTCCTTCGTAGGAAACCCG 420
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GAGCCGCTCGTCGCCCGCCCCGCCGCGTGCTCCCGCGGCTACGTCATCCAGCCCGGGTCC 480
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CACTCCGACTCCGCGCCGCCGCTCATGCCATCCAGTTCCGGCAATGCGGTGCAGTCCGAT 540
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCAACGGATGCCGTCAAGAGGATTGTTCTCGCGCCCAAGAGCGTCTCCGAGGCCGCGCCG 600
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CCGCCCGCCGTTTCAGCCGCCAAGAGGCGGTTCTCGTCTCCGGCGCCGTCCAAGCAGCGA 660
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GATCCGTCGCCTTCGGTCAAGGGCGGCGCGTCACGGCCTTCGTCGCCCTCGGTGAAGGGC 720
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCTTCCCGAGCGTCCTCACCTGCGGTCAGGGGCACGCCCAGGGCGACGTCACCAGCGCCT 780
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      TCCAAATGCGTGGTGCCCAGCCTTGTTTCGGCCAAGGAGGAGAATCGCCGCACGGCGAGG 840
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GAGCCAGCGATTATCGTGCCATCGAGGTACAGGCAGCCGTCACCGGTAGGAGGGAGGAGA 900
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GGGGCGGCGTCGCCCGCACCCGGTGGGAGGCGCGCGTCACTGTCTCCTAGCTCCCGGAGG 960
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CTGTCCGGGGAAGGTAGCAGCAAGAAGAAGGTCGGGGTGTTGGTGGCTGGTATCTCCAAG 1020
consensus_5951#1      -----------------------------------------TTTTTTTTTTTTTTGAGGA 19
                                                                 *   *  * * *     

consensus_5951#0      ATGACGGATTTGACGAATGGGTCGGCTGTTAAGCCGGGGAGGAAGAGCTGGGACAATACC 1080
consensus_5951#1      AAGAGAGAATTGAAAACACTGTTATTTATTTT-CTTTCCAGATACAATGGCAGCTAGTTT 78
                      * **  ** ****  *    **    * **   *     **  * *   *   * *    

consensus_5951#0      TCAATCGCAGCAGCGGCTGGCTCTGTGATGAAATCGAAGGTCAAGGTGGATAAGAGTACT 1140
consensus_5951#1      GTAATCTTTGAA---TTTGACTCAGGGACATACCC-----TTCCCTACCATCATCACATT 130
                        ****   * *     ** *** * **   *  *     *        ** *    * *

consensus_5951#0      ATTCTGAGGACACAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCC 1200
consensus_5951#1      TTTGTGTTACTGCAGGAAGCAATGGCAAGACGACTGAGTGATGTTACAACAGAACTATCC 190
                       ** **      ************************************************

consensus_5951#0      AGTAACGATGATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCA 1260
consensus_5951#1      AGTAACGATCATGATTCATCTGTAGATGAGAAGCCAAAGCCACGGAAGAAGATAGAGTCA 250
                      ********* **************************************************

consensus_5951#0      CCTGCAGTAAAGACGAAAGCAATGGCTCCAAAAATTATGCTTCATGATCCTAAATGGACC 1320
consensus_5951#1      CCTGCAGTAAAGACGAAAGCAATGGCTCCCAAAATTATGCTTCATGATCCTAAATGGACC 310
                      ***************************** ******************************

consensus_5951#0      GATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGAAGCC 1380
consensus_5951#1      GATGGAAGCATTCCATTGGATGGAGTTTCTGATGTGCTTTCAAAGATGGGAAAGGTAAGC 370
                      ******************************************************* *  *

consensus_5951#0      ACTGAACGAAGAGACGCAGCAGCAATTGCTGCAGCTGATGCTCTCCAGGAGGCATTAATC 1440
consensus_5951#1      ACTCCCAATTCATCTTTGTTAGCAAT-GATCAAGTCGCAGTTCATT--GATCCTTGAAAC 427
                      ***        *        ****** * *  **  *  * **     **  * * ** *

consensus_5951#0      ACTGAATCCGTAATCAGGAACCTAAGTAAATTTTCTGAACTTACTTCAGCATCGAAGAC- 1499
consensus_5951#1      ACCACCTCTTCTCT---GAATTTGCAGGAAGCCACTGAACGAACAGACGCACCACCAATT 484
                      **    **     *   ***  *     **    ******  **    *** *    *  

consensus_5951#0      -CTCCAATCCCCTTCCAACAGTTGATATCTTCCTTGCTGTCTATGAGGATACTCTCAAAT 1558
consensus_5951#1      GCTGCAACTGATGCTCTGCAGGAGGCA--TTAATCACTGAATCCG----TAATCAGGAAC 538
                       ** ***        *  ***  *  *  **  *  ***  *  *    ** **   ** 

consensus_5951#0      GGAAGAAAATTGCTGAGTCTATATCCACCAATAGAACTGAAACTGCATCATGGGAGAATT 1618
consensus_5951#1      CTAAGGTAATTAA-AAGCCGACTTGTGTCCCCGGAATTTCACTCAGCACAAAAGTGGTTT 597
                        ***  ****    ** * *  *    *    *** *  *       **   * *  **

consensus_5951#0      CAGCTACTCATTGGGTTGAAGCAGCATTGGCAACTGATCTTGAAGTCCTAAAGTTGATGA 1678
consensus_5951#1      TTCCTAACACTCAGCTTG--CTATTGTCCACAGTAAATTTTCT-GAACTAACTTCAGCAT 654
                         ***    *  * ***    *   *   **    ** **   *  ****  *      

consensus_5951#0      ATAAGGCACCTGAATCGCTCTCTCGGAAAAGGGGTGCTGATAAGCCAAAGGCTCCCTCGG 1738
consensus_5951#1      CGGNGACCTCCAA----------------------------------------------- 667
                          * *  *  *                                               

consensus_5951#0      TGGTAGAAGCTCCAAGAACAACCATATCCAAGAGGCAATCACATGGGACTTCTGCAAAGG 1798
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      TCCAGTCAAAGGTCTTACCGACCTCTACAGCGAGCTGCGCATGGAACAAAACTCAGGGCG 1858
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      TGAATGAGACGGCTGAGCTTGCCACGACCTTGTGCCGTGAGATGCATACGTGGTTCCTGA 1918
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      AATTTGTGGACGAGGCAATGGATTTGGGTTTCCACCTTTTTGAAGATCAGAATGTTGCAA 1978
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GTAGGGGAAAGCAGAGCAGCCACATAACAATGGTACTGTCCCAGTTCAAGAAGATCAGTG 2038
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      ACTGGTTGGATGGAGTAGGCAAGATTGCAGAAGAGGCTACAACTAAGGATAAGGTTGAGC 2098
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      AGTTGAAGTGCAAGATTTACGGGTTCGTCATCAATCACATGGGATCTGCATTTGATAGCT 2158
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CGGTCTCGATTTCATCAAGGAATTGAGGAATGCTTAAAGTAAGCCTTTAAGTTTCTTCTC 2218
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      TTTTATTTTTGTTCATTGGGGATGGGATCAAAGCTACATAATTCTATGACGAGAGGTCTG 2278
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      CTACAGTTTGTAGAAGCTACTCCTTCAGTTATTACCTTTGGTTTTGCCTTGTGAATAAGT 2338
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      TGTTTGTGAAATGGTTCTTGTTTTATCGGTTACAATTATGTACACTTGATAGTTTAGCTT 2398
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCTGTAGTCTGAGTGAATGACTGACTTGTTAAAGCTACAAGATATCATTCTTACATCCTT 2458
consensus_5951#1      ------------------------------------------------------------
                                                                                  

consensus_5951#0      GCAAATATTGTGCTAGGATTAATGGTATGTTAATTTGATTGGTGCC 2504
consensus_5951#1      ----------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)