These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5955#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1798 fasta sequence [GATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGGTGGTGGAAATTTTGGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCATCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCATTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGATGTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCTGGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAGGAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTGTTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTAGCTCGTTCACTGGATGGTGCACTGAGGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCACTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATACACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTGAAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTCAGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAGGACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTATGATGCAGAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATTCCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCAGTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAGAAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAAGAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACATCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTCCTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACGCAGTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAATCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGAT-ATGCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCT-GTTTTGAATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAGAGCCGTAGA-GGCTATCTCTGCAATTGCAAACCTTGTTTTCTTGGGAACGATTGCAAGTAAAGTGTATATATATAGTTCTTATAGTGTAGTACCTCCTTAAGGAGGTAACTTGGGAACGTTTTCTGCTTGTACATAGCTGAATCTGATTGGAATGAAGAGAG-TAAAATATTCTGCAGTCGGCACTTTTGTTGTGTCATGAACTGGAATACCCTGACATGGGGCAGTCGGCACTTTTGTTGTGTCATGAACTGGAATACCCTGACATGGGAGAGATCACTCCCCCTGTAACATGAGCTGTTTTGATGTCAAAGAACTC] [+] EMBL AK063376 [GATCTCTATGGAGATGAAAAGGGTAACCCAGGATTTGGTGGTGGAAATTTTGGAAATCGTGAGGGCTACACATACTTCACTGGTGGTGGCGCCAAGACTAGCCATTTCTCATCTGGTGATGGATGGCAAACGATGGGCGGCCAGGGAAATACAAAAACATTTTCCTTTTCATTTGGTGGTGGTAACCCTGGTGCCGGTGGAGGAAACCCATTTAACTTTGATTTTGGTGATGTTTTTTCCAACATATTTTCTGGTGGATCAATGGGAGGTAGTCAGCATACTGGATCTGCTGGCAAAGCCAGACGTGGTACAAAATCTTCTGGTCATGATTCTAGTTCTGTCAACATTCAGGAGGTCACGATGCAAATTTTCAATAAAGAAACAGCTGATCAAGGAATCACTTGGCTTTTGTTATTCTATACACCAAACACAAAAGGTCAATTTGTGCTAGAAAGTGTCGTGGAGGATGTAGCTCGTTCACTGGATGGTGCACTGAGGGCTGGTAAGGTAAACTGCGACCATGAAAAGGCACTTTGCAAGAAGGCTGGTGTCTCAATAGGAAAATCAGCTCGTCTCTTCATTTATTCATACACAACTACAGAAAAAGGGTCTTTGCATGAGTACTCAGGAGATTATGATTCTAAGAGCCTGAAGACATTTTGTCAAGAACACCTGCCAAGATTTTCCAAAAGGGTAGACATCAACCAATTCAGCTTCCCCTCAAATATCATACCAAACCTTCCTCAAGTGCTCCTACTGTCAGCTAAGAAGGACACACCAGCAATGTGGCGTGCTGTTAGTGGGATGTTCCGCAGTCGATTAATTTTCTATGATGCAGAGGTCCAGGATGTTTCTCATCCACTCCTCAAAAGCCTTGGTGTGAAGAATATTCCAGCTCTAATTGGTAGGTCCGTTAATGGTGAGGAACAACTTCTGAAGGATGGCATTTCAGTGAAAGATCTCAGATCTGGTATCAAAGAATTGAAGAATCTGCTCGAAAATTTTGAGAAGAAGAATAAGAAGCTTGCATCAAACCAAGCTAAGAAACCTGCTCACACAGATCAACCAAAAGAAAACAAAATTCCTCTCCTCACTGCTTCCAACTTTGAGGAGATTTGTGGTGAGAAGACATCAGTATGTATCCTTGGCATTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTCCTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACGCAGTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAATCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGAT ATGCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCT GTTTTGAATGGAGATGTTCAATTGTCTGCAGCCGGACGAAAACCAGTTCTTAGGTAGAGCCGTAGA GGCTATCTCTGCAATTGCAAACCTTGTTTTCTTGGGAACGATTGCAAGTAAAGTGTATATATATAGTTCTTATAGTGTAGTACCTCCTTAAGGAGGTAACTTGGGAACGTTTTCTGCTTGTACATAGCTGAATCTGATTGGAATGAAGAGAG TAAAATATTCTGCAGTCGGCACTTTTGTTGTGTCATGAACTGGAATACCCTGACATGGGGCAGTCGGCACTTTTGTTGTGTCATGAACTGGAATACCCTGACATGGGAGAGATCACTCCCCCTGTAACATGAGCTGTTTTGATGTCAAAGAACTC] [+] EMBL AA752445 [ cgagTTTCAAATCAAGCAAAGCTAAGGAAAATCTTGAAGCCGTCCTGTCTGAGATATCTCAGAAGACTCTGATAAGGGGGCAGAACTACAACTCTGGGAACACAGTTGCTTATGCTTTGTTGGACGGGAACAAACAGTCCGCCTTCCTGTCCACGTTTGACAAATCAGCATTCAAGTCGTCTGATAAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGAT ATGCTGTGTATGACAATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCTKTTTTTGAATGGAGAWGT ] [+] EMBL BI802066 [ AAACTTCTCCTTGCCTACAAGCCCCGACGGGGTAGATGATGCTGTGTATGAC ATGAGGTGACTATGGAAGAGGCTGAAAGGTTCGTGGTTTCT GTTTTGAATGGAGATGTTC ATTGTCT CAGCCGGACGAAAACC GTTCTTAGGTAGA CCGTAGACGGCTATCTCTGCCATTGC AACCTTGTTTTCTTGGGAACGATT CAAGTAAAGAGTATATATATAGTTCTTATAGTGTAGTACC CCTTAAGGAGGTAACTTGGGAACGTTTTCTGCTTGTACATATCTGAATCTGATTGGAATGAAGAGAGCTAAAATATTCTCCAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||