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Oryza sativa
cluster # 5957 cluster # 5957       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5957#0 length = 614 sequences # 3  

consensusID : consensus_5957#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 614
fasta sequence
                              [AAAACGCCACCACCACCAAAGTCAGGCACCCCCGCCGAGAGAGTTAGCTAGCTGCGCGCATGCAGGCGAGGCGGCACAGAGGATTCCGGCTAGGCCGGAAGCTGCTCGGGCTCTGGCGATGGGCGCTCTGCCACCGGCGGCGGCGGCGCGGCCGCGGCTACCTCCGCCTGCAGCCGTGCCCGGGAGCTGCAGGCGGCCGCTCCCCTCTGCTGGCCGCCGGGAGCGTCAAGAAGCAGCCGCCGCCGCCGCAGCAGCAGATCGTCGTGCATCAGCGTGGTGGGGAGAAGGCGGTGCTCAAGTGGGGGCGGTCGCTGGCGCGGCGGATGAGGCTCCTGCGGCGGCGGGGATCCGAGCGGCTCCTGGAGGAATCCCCCGGGGAGGCGACGACGCCCAAGGGGCAGGTGGCGGTGTACGTGGGCGGCGGCGAGCCCGGGGAGTCGATGAGGTACGTGGTGCCGGTGGTCTACTTCAACCACCCGCTGTTCGGCGAGCTGCTCCGCGAGGCCGAGGAGGAGTTCGGGTTCGCGCACCCGGGCGGCATCACCATCCCCTGCGCCGCCGCGCGGTTCGAGCGCGCGGCCGCCGTGGCCGCCGCGGGCGGCGGCGGGAGGAAG]

[+] EMBL CA758724             [AAAACGCCACCACCACCAAAGTCAGGCACCCCCGCCGAGAGAGTTAGCTAGCTGCGCGCATGCAGGCGAGGCGGCACAGAGGATTCCGGCTAGGCCGGAAGCTGCTCGGGCTCTGGCGATGGGCGCTCTGCCACCGGCGGCGGCGGCGCGGCCGCGGCTACCTCCGCCTGCAGCCGTGCCCGGGAGCTGCAGGCGGCCGCTCCCCTCTGCTGGCCGCCGGGAGCGTCAAGAAGCAGCCGCCGCCGCCGCAGCAGCAGATCGTCGTGCATCAGCGTGGTGGGGAGAAGGCGGTGCTCAAGTGGGGGCGGTCGCTGGCGCGGCGGATGAGGCTCCTGCGGCGGCGGGGATCCGAGCGGCTCCTGGAGGAATCCCCCGGGGAGGCGACGACGCCCAAGGGGCAGGTGGCGGTGTACGTGGGCGGCGGCGAGCCCGGGGAGTCGATGAGGTACGTGGTGCCGGTGGTCTACTTCAACCACCCGCTGTTCGGCGAGCTGCTCCGCGAGGCCGAGGAGGAGTTCGGGTTCGCGCACCCGGGCGGCATCACCATCCCCTGCGCCGCCGCGCGGTTCGAGCGCGCGGCCGCCGTGGCCGCCGCGGGCGGCGGCGGGAGGAAG]
[+] EMBL AU070771             [                                                                                                                                                                                                                                           GCCGCCGCCGCCGCAGCAGCAGATCGTCGTGCATCAGCGTGGTGGGGAGAAGGCGGTGCTCAAGTGGGGGCGGTC CTGGCGCGGCGGATGAGGCTCCTGCGGCGGCGGGGATCCGAGCGGCTCCTGGAGGAATCCCCCGGGGAGGCGACGACGCCCAAGGGGCAGGTGGCGGTGTACGTGGGCGGCGGCGAGCCCGGGGAGTCGATGAGGTACGTGGTGCCGGTGGTCTACTTCAACCACCCGCTGTTCGGCGAGCTG TCCGCGAGGCCGAGGAGGAGTTCGGGTTCGCGCACCCGGGCGGCATCACCATCCCCTGCGCCGCCGCGCGGTTCGA                                           ]
[+] EMBL AU083499             [                                                                                                                                                                                                                                           GCCGCCGCCGCCGCAGCAGCAGATCGTCGTGCATCAGCGTGGTGGGGAGAAGGCGGTGCTCAAGTGGGGGCGGTCGCTGGCGCGGCGGATGAGGCTCCTGCGGCGGCGGGGATCCGAGCGGCTCCTGGAGGAATCCCCCGGGGAGGCGACGACGCCCAAGGGGCAGGTGGCGGTGTACGTGGGCGGCGGCGAGCCCGGGGAGTCGATGAGGTACGTGGTGCCGGTGGTCTACTTCAACCACCCGCTGTTCGGCGAGCTGCTCCGCGAGGCCGAGGAGGAGTTCGGGTTCGCGCACCCGGGCGGCATCACCATCCCCTGCGCCGCCGCGCGG                                                ]


>consensus_5957#0 AAAACGCCACCACCACCAAAGTCAGGCACCCCCGCCGAGAGAGTTAGCTAGCTGCGCGCA TGCAGGCGAGGCGGCACAGAGGATTCCGGCTAGGCCGGAAGCTGCTCGGGCTCTGGCGAT GGGCGCTCTGCCACCGGCGGCGGCGGCGCGGCCGCGGCTACCTCCGCCTGCAGCCGTGCC CGGGAGCTGCAGGCGGCCGCTCCCCTCTGCTGGCCGCCGGGAGCGTCAAGAAGCAGCCGC CGCCGCCGCAGCAGCAGATCGTCGTGCATCAGCGTGGTGGGGAGAAGGCGGTGCTCAAGT GGGGGCGGTCGCTGGCGCGGCGGATGAGGCTCCTGCGGCGGCGGGGATCCGAGCGGCTCC TGGAGGAATCCCCCGGGGAGGCGACGACGCCCAAGGGGCAGGTGGCGGTGTACGTGGGCG GCGGCGAGCCCGGGGAGTCGATGAGGTACGTGGTGCCGGTGGTCTACTTCAACCACCCGC TGTTCGGCGAGCTGCTCCGCGAGGCCGAGGAGGAGTTCGGGTTCGCGCACCCGGGCGGCA TCACCATCCCCTGCGCCGCCGCGCGGTTCGAGCGCGCGGCCGCCGTGGCCGCCGCGGGCG GCGGCGGGAGGAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)