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Oryza sativa
cluster # 5958 cluster # 5958       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5958#0 length = 1995 sequences # 2  
consensus_5958#1 length = 792 sequences # 1  

consensusID : consensus_5958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1995
fasta sequence
                              [GGAGCGAGCGTGCAAGGAAGAAGAAGAAGAGGCATCGGCATCGCGTCGGGAAGGCCCCCCATGGATATGGATCCTCCCACCAATAACCCTAGCCCCCCTGGTCCCCCCGACTCCCCGCCGCCGGAGAAGGGGCTCGCCTCCCTCTCCCTCCGCACCTCTCACCTCCCTCCCGACTTCGAGATCCACGACGACTACGACGACGACGACGACGAGGGCTACCTCACTGCCGTCTCCAGGGTAGGGAGCATCAGCACCTCCGCCTCCGCCTGGAAGGACGACCTCGAAGACGCCGACGTGGCTCCACCCAGCCCCAGCAGCAGCGGCTACGCCGCCGAGAGGGGCACCAGCCTCGCCTCCAGCGCCGCCGCCAACGACGATCCCCAACCCCAACCCGACGACGACGATTGGCCCCGCGACAAGAAGCATCTCCACGAGGACGATACTTCTGCTTCATGGCGCAAACGGAAAAAGCACTTCTTCATCTTGAGCAATTCTGGCAAGCCAATTTATTCTAGGTATGGAGATGAGCATAAGCTTGCTGGGTTTTCCGCCACGTTGCAAGCAATCATTTCTTTCGTTGAGAACAGTGGTGACCATATCAAATTTGTAAGGGCTGCCAAACATCAGATAGTTTTCCTTGTCAAGGGTCCAATATACTTAGTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATGTATGGTCAGATGCTGCTGATTTTGACCAAGTCTGTCAACAGATGCTTTGAGAAGAACCCTAAATTTGATATGGCACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACATGCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAATCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTTGCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTGCATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACTTCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATCATCTGAGTTCCCCTTAATCATAAGCAATCCAAAGCAACAGAAAAGATTGTACAAAGCTTATCAAAAATTGTATGCTTCCATGCATGATAAAGCAACTGGTCCACATAAAACCCAATTCAGAAGAGATGAAGATTATGTTCTGTTCTGCTGGATAACCCAGGATTTTGAGTTGTACGCCGCTTTTAATCCACTGGCTGACAAGAGTCAAGCAATCAAGGTATGCAATAGAGTATGCCAATGGATCAGGGACCTGGAAAACGAAATTTTCGTATACGGAGAAAGCACCCTTTCCTGGTGATATATTGTCTTGCAGTACCATCACTGTTGGGGAGATATGAGGGATTAGGTTTGTATAACATTTTCACTAAAGTCA-TGATTTTATTTGCTACCCAGGGTATTTCATGTCAATTTTAATTGGTTCCTGTTTGTTGTCAATGCCATTTCGTTTCTTTCACTCTATGTATGTTCTTCGTGTAATCTAATCCGTTAGTACCTTTTAGAGTTAGTAATTTCCATCGGGATCCATACT]

[+] EMBL AK067175             [GGAGCGAGCGTGCAAGGAAGAAGAAGAAGAGGCATCGGCATCGCGTCGGGAAGGCCCCCCATGGATATGGATCCTCCCACCAATAACCCTAGCCCCCCTGGTCCCCCCGACTCCCCGCCGCCGGAGAAGGGGCTCGCCTCCCTCTCCCTCCGCACCTCTCACCTCCCTCCCGACTTCGAGATCCACGACGACTACGACGACGACGACGACGAGGGCTACCTCACTGCCGTCTCCAGGGTAGGGAGCATCAGCACCTCCGCCTCCGCCTGGAAGGACGACCTCGAAGACGCCGACGTGGCTCCACCCAGCCCCAGCAGCAGCGGCTACGCCGCCGAGAGGGGCACCAGCCTCGCCTCCAGCGCCGCCGCCAACGACGATCCCCAACCCCAACCCGACGACGACGATTGGCCCCGCGACAAGAAGCATCTCCACGAGGACGATACTTCTGCTTCATGGCGCAAACGGAAAAAGCACTTCTTCATCTTGAGCAATTCTGGCAAGCCAATTTATTCTAGGTATGGAGATGAGCATAAGCTTGCTGGGTTTTCCGCCACGTTGCAAGCAATCATTTCTTTCGTTGAGAACAGTGGTGACCATATCAAATTTGTAAGGGCTGCCAAACATCAGATAGTTTTCCTTGTCAAGGGTCCAATATACTTAGTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATGTATGGTCAGATGCTGCTGATTTTGACCAAGTCTGTCAACAGATGCTTTGAGAAGAACCCTAAATTTGATATGGCACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACATGCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAATCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTTGCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTGCATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACTTCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATCATCTGAGTTCCCCTTAATCATAAGCAATCCAAAGCAACAGAAAAGATTGTACAAAGCTTATCAAAAATTGTATGCTTCCATGCATGATAAAGCAACTGGTCCACATAAAACCCAATTCAGAAGAGATGAAGATTATGTTCTGTTCTGCTGGATAACCCAGGATTTTGAGTTGTACGCCGCTTTTAATCCACTGGCTGACAAGAGTCAAGCAATCAAGGTATGCAATAGAGTATGCCAATGGATCAGGGACCTGGAAAACGAAATTTTCGTATACGGAGAAAGCACCCTTTCCTGGTGATATATTGTCTTGCAGTACCATCACTGTTGGGGAGATATGAGGGATTAGGTTTGTATAACATTTTCACTAAAGTCA TGATTTTATTTGCTACCCAGGGTATTTCATGTCAATTTTAATTGGTTCCTGTTTGTTGTCAATGCCATTTCGTTTCTTTCACTCTATGTATGTTCTTCGTGTAATCTAATCCGTTAGTACCTTTTAGAGTTAGTAATTTCCATCGGGATCCATACT]
[-] EMBL CB662123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTTCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATCATCTGAGTTCCCCTTAATCATAAGCAATCCAAAGCAACAGAAAAGATTGTACAAAGCTTATCAAAAATTGTATGCTTCCATGCATGATAAAGCAACTGGTCCACATAAAACCCAATTCAGAAGAGATGAAGATTATGTTCTGTTCTGCTGGATAACCCAGGATTTTGAGTTGTACGCCGCTTTTAATCCACTGGCTGACAAGAGTCAAGCAATCAAGGTATGCAATAGAGTATGCCAATGGATCAGGGACCTGGAAAACGAAATTTTCGTATACGGAGAAAGCACCCTTTCCTGGTGATATATTGTCTTGCAGTACCATCACTGTTGGGGAGATATGAGGGATTAGGTTTGTATAACATTTTCACTAAAGTCAGTGATTTTATTTGCTACCCAG                                                                                                                                        ]


>consensus_5958#0 GGAGCGAGCGTGCAAGGAAGAAGAAGAAGAGGCATCGGCATCGCGTCGGGAAGGCCCCCC ATGGATATGGATCCTCCCACCAATAACCCTAGCCCCCCTGGTCCCCCCGACTCCCCGCCG CCGGAGAAGGGGCTCGCCTCCCTCTCCCTCCGCACCTCTCACCTCCCTCCCGACTTCGAG ATCCACGACGACTACGACGACGACGACGACGAGGGCTACCTCACTGCCGTCTCCAGGGTA GGGAGCATCAGCACCTCCGCCTCCGCCTGGAAGGACGACCTCGAAGACGCCGACGTGGCT CCACCCAGCCCCAGCAGCAGCGGCTACGCCGCCGAGAGGGGCACCAGCCTCGCCTCCAGC GCCGCCGCCAACGACGATCCCCAACCCCAACCCGACGACGACGATTGGCCCCGCGACAAG AAGCATCTCCACGAGGACGATACTTCTGCTTCATGGCGCAAACGGAAAAAGCACTTCTTC ATCTTGAGCAATTCTGGCAAGCCAATTTATTCTAGGTATGGAGATGAGCATAAGCTTGCT GGGTTTTCCGCCACGTTGCAAGCAATCATTTCTTTCGTTGAGAACAGTGGTGACCATATC AAATTTGTAAGGGCTGCCAAACATCAGATAGTTTTCCTTGTCAAGGGTCCAATATACTTA GTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATG TATGGTCAGATGCTGCTGATTTTGACCAAGTCTGTCAACAGATGCTTTGAGAAGAACCCT AAATTTGATATGGCACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACAT GCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAA TCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTT GCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTG CATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACT TCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCT TATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCC TTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTC CTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCT GATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAG TTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAA AGCATTTACCTTGATCAATATGTATCATCTGAGTTCCCCTTAATCATAAGCAATCCAAAG CAACAGAAAAGATTGTACAAAGCTTATCAAAAATTGTATGCTTCCATGCATGATAAAGCA ACTGGTCCACATAAAACCCAATTCAGAAGAGATGAAGATTATGTTCTGTTCTGCTGGATA ACCCAGGATTTTGAGTTGTACGCCGCTTTTAATCCACTGGCTGACAAGAGTCAAGCAATC AAGGTATGCAATAGAGTATGCCAATGGATCAGGGACCTGGAAAACGAAATTTTCGTATAC GGAGAAAGCACCCTTTCCTGGTGATATATTGTCTTGCAGTACCATCACTGTTGGGGAGAT ATGAGGGATTAGGTTTGTATAACATTTTCACTAAAGTCATGATTTTATTTGCTACCCAGG GTATTTCATGTCAATTTTAATTGGTTCCTGTTTGTTGTCAATGCCATTTCGTTTCTTTCA CTCTATGTATGTTCTTCGTGTAATCTAATCCGTTAGTACCTTTTAGAGTTAGTAATTTCC ATCGGGATCCATACT



consensusID : consensus_5958#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 792
fasta sequence
                              [ATTGTCAAGGGTCCAATATACTTAGTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATGTATGGTCAGATGCTGCTGATTTTGACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACATGCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAATCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTTGCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTGCATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACTTCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATCATCTGAGATCCC]

[+] EMBL CB662122             [ATTGTCAAGGGTCCAATATACTTAGTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATGTATGGTCAGATGCTGCTGATTTTGACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACATGCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAATCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTTGCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTGCATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACTTCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATCATCTGAGATCCC]


>consensus_5958#1 ATTGTCAAGGGTCCAATATACTTAGTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGA TTGAGGGGACAACTAGAGCTCATGTATGGTCAGATGCTGCTGATTTTGACCATTGCTAGG TGGCACAGATGCAGTTTTCCTATCACTTATACATGCATTCAGCTGGAATCCTGCTACATT TCTTCATGCGTACACATGCCTTCCCCTCGCCCAATCCACAAGGCAGGCGGCTAGTGCAGT TTTACAAGACATTGCTGATTCAGGAGTTTTGTTTGCACTGTTGATGTGTGAGCACAAGGT TATTAGTCTAGTGGGAGCACAAAAGGCAACTTTGCATCCTGATGATATTTTTCTACTTTC AAATTTCATATTGTCCTCTGAATCTTTTAGGACTTCGGAGTCTTTTTCACCCATATGCCT TCCAAGATACAATTCTATGGCTTTCTTATATGCTTATGTTCATTTTTTTGATGAAAATAC ATACTTGACACTTCTTACTGCAAGATCAGACGCCTTTTATGATCTGAAAGATTCCAGGTC CCGCATTCAGAATGTTCTCTTGAAGGCAAATGTCCTTGTGGAAGTCCAAAGGTCTCTGCG TGAGAGCGCACTGCGCATTGAAGATCTCCCTGCTGATCCATCTTCTCAATCTGTATCACC ACCTCCACAGTTCTCTCAAGATCTGCACTTTCAGTTATTATCTTCTGAAATGGCAATTGG TGGACCAGCTGGACTTTGGCATTTTATATATAAAAGCATTTACCTTGATCAATATGTATC ATCTGAGATCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5958#0      GGAGCGAGCGTGCAAGGAAGAAGAAGAAGAGGCATCGGCATCGCGTCGGGAAGGCCCCCC 60
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ATGGATATGGATCCTCCCACCAATAACCCTAGCCCCCCTGGTCCCCCCGACTCCCCGCCG 120
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      CCGGAGAAGGGGCTCGCCTCCCTCTCCCTCCGCACCTCTCACCTCCCTCCCGACTTCGAG 180
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ATCCACGACGACTACGACGACGACGACGACGAGGGCTACCTCACTGCCGTCTCCAGGGTA 240
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      GGGAGCATCAGCACCTCCGCCTCCGCCTGGAAGGACGACCTCGAAGACGCCGACGTGGCT 300
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      CCACCCAGCCCCAGCAGCAGCGGCTACGCCGCCGAGAGGGGCACCAGCCTCGCCTCCAGC 360
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      GCCGCCGCCAACGACGATCCCCAACCCCAACCCGACGACGACGATTGGCCCCGCGACAAG 420
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      AAGCATCTCCACGAGGACGATACTTCTGCTTCATGGCGCAAACGGAAAAAGCACTTCTTC 480
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ATCTTGAGCAATTCTGGCAAGCCAATTTATTCTAGGTATGGAGATGAGCATAAGCTTGCT 540
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      GGGTTTTCCGCCACGTTGCAAGCAATCATTTCTTTCGTTGAGAACAGTGGTGACCATATC 600
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      AAATTTGTAAGGGCTGCCAAACATCAGATAGTTTTCCTTGTCAAGGGTCCAATATACTTA 660
consensus_5958#1      ------------------------------------ATTGTCAAGGGTCCAATATACTTA 24
                                                           ***********************

consensus_5958#0      GTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATG 720
consensus_5958#1      GTTTGTATAAGTTGCACTGAAGAGTCATATGAAGGATTGAGGGGACAACTAGAGCTCATG 84
                      ************************************************************

consensus_5958#0      TATGGTCAGATGCTGCTGATTTTGACCAAGTCTGTCAACAGATGCTTTGAGAAGAACCCT 780
consensus_5958#1      TATGGTCAGATGCTGCTGATTTTGACCA-------------------------------- 112
                      ****************************                                

consensus_5958#0      AAATTTGATATGGCACCATTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACAT 840
consensus_5958#1      ------------------TTGCTAGGTGGCACAGATGCAGTTTTCCTATCACTTATACAT 154
                                        ******************************************

consensus_5958#0      GCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAA 900
consensus_5958#1      GCATTCAGCTGGAATCCTGCTACATTTCTTCATGCGTACACATGCCTTCCCCTCGCCCAA 214
                      ************************************************************

consensus_5958#0      TCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTT 960
consensus_5958#1      TCCACAAGGCAGGCGGCTAGTGCAGTTTTACAAGACATTGCTGATTCAGGAGTTTTGTTT 274
                      ************************************************************

consensus_5958#0      GCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTG 1020
consensus_5958#1      GCACTGTTGATGTGTGAGCACAAGGTTATTAGTCTAGTGGGAGCACAAAAGGCAACTTTG 334
                      ************************************************************

consensus_5958#0      CATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACT 1080
consensus_5958#1      CATCCTGATGATATTTTTCTACTTTCAAATTTCATATTGTCCTCTGAATCTTTTAGGACT 394
                      ************************************************************

consensus_5958#0      TCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCT 1140
consensus_5958#1      TCGGAGTCTTTTTCACCCATATGCCTTCCAAGATACAATTCTATGGCTTTCTTATATGCT 454
                      ************************************************************

consensus_5958#0      TATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCC 1200
consensus_5958#1      TATGTTCATTTTTTTGATGAAAATACATACTTGACACTTCTTACTGCAAGATCAGACGCC 514
                      ************************************************************

consensus_5958#0      TTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTC 1260
consensus_5958#1      TTTTATGATCTGAAAGATTCCAGGTCCCGCATTCAGAATGTTCTCTTGAAGGCAAATGTC 574
                      ************************************************************

consensus_5958#0      CTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCT 1320
consensus_5958#1      CTTGTGGAAGTCCAAAGGTCTCTGCGTGAGAGCGCACTGCGCATTGAAGATCTCCCTGCT 634
                      ************************************************************

consensus_5958#0      GATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAG 1380
consensus_5958#1      GATCCATCTTCTCAATCTGTATCACCACCTCCACAGTTCTCTCAAGATCTGCACTTTCAG 694
                      ************************************************************

consensus_5958#0      TTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAA 1440
consensus_5958#1      TTATTATCTTCTGAAATGGCAATTGGTGGACCAGCTGGACTTTGGCATTTTATATATAAA 754
                      ************************************************************

consensus_5958#0      AGCATTTACCTTGATCAATATGTATCATCTGAGTTCCCCTTAATCATAAGCAATCCAAAG 1500
consensus_5958#1      AGCATTTACCTTGATCAATATGTATCATCTGAGATCCC---------------------- 792
                      ********************************* ****                      

consensus_5958#0      CAACAGAAAAGATTGTACAAAGCTTATCAAAAATTGTATGCTTCCATGCATGATAAAGCA 1560
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ACTGGTCCACATAAAACCCAATTCAGAAGAGATGAAGATTATGTTCTGTTCTGCTGGATA 1620
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ACCCAGGATTTTGAGTTGTACGCCGCTTTTAATCCACTGGCTGACAAGAGTCAAGCAATC 1680
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      AAGGTATGCAATAGAGTATGCCAATGGATCAGGGACCTGGAAAACGAAATTTTCGTATAC 1740
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      GGAGAAAGCACCCTTTCCTGGTGATATATTGTCTTGCAGTACCATCACTGTTGGGGAGAT 1800
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ATGAGGGATTAGGTTTGTATAACATTTTCACTAAAGTCATGATTTTATTTGCTACCCAGG 1860
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      GTATTTCATGTCAATTTTAATTGGTTCCTGTTTGTTGTCAATGCCATTTCGTTTCTTTCA 1920
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      CTCTATGTATGTTCTTCGTGTAATCTAATCCGTTAGTACCTTTTAGAGTTAGTAATTTCC 1980
consensus_5958#1      ------------------------------------------------------------
                                                                                  

consensus_5958#0      ATCGGGATCCATACT 1995
consensus_5958#1      ---------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)