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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5963 cluster # 5963       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5963#0 length = 602 sequences # 3  

consensusID : consensus_5963#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 602
fasta sequence
                              [GCCCCCTCCCGCGCCGTCCTCGCGCTCAAGCGNCGCCCGCGCATCGACGCGGGCGTCAGCGCGTCGAN-GANGGTCGAGGAGCCTCTCGA-CCCGCCATCGCCCTCG-CTGCGTCGACGACCC-GCAA-CCTC-GCGGGGTCGAGTCCCCGATCATTCGGCTCGTCTCCGAAGAGTACGGCGTCGGCGGGGACGCCGCGCCGTTCGTCTG-CCTCGGCGGGTTCCGGAACACCCGCGCCGTGTACCAGC-TGGAGGAGGGCGACACCCTCGGGC-TCGTCGTGGAGC-TCGACGAGACGCGC-TTCGACTTTGGTACGAACTACGAGCTGGAGTGTGAAACGGCGGAGCCCGAGCAGGCCAAGCAGGTCCTCGAGCGGTTGCTCACCGTGGCCGGCGTGCCGTATGAGTATTCCCGGAGCAATAAGTTTGCCTGCTTTATGGCTGGAAAGCTTCTTCCTTAACTAGGTGATACTCC-TTGCTGTACTCTTGGTGATTTTAAGACATGATTATTGTTTCTGAGGCATTAACAATGTGTTAAGCAAAATATCGTTGTCTCTTGCAATTTCGCTATTCCAATTGTGAGGAAAATAAGATTCTGTTATGTTCAAAAAA]

[+] EMBL OSC191               [GCCCCCTCCCGCGCCGTCCTCGCGCTCAAGCGNCGCCCGCGCATCGACGCGGGCGTCAGCGCGTCGANGGANGGTCGAGGAGCCTCTCGACCCCGCCATCGCCCTCGCCTGCGTCGACGACCCGGCAAGCCTCGGCGGGGTCGAGTCCCCGATCATTCGGCTCGTCTCCGAAGAGTACGGCGTCGGCGGGGACG CGCGCCGTTCGTCTG CCTCGGCGGGTTCCGGAACAACCGCGCCGTGTACCAGCTTGGAGGAGGGCGACAACCTCGGGCTTCGTCGTGGAGCTTCGACGAGACGCGCTTTCGACTTTGGTACGAAC                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI811042             [                                                                     aggaGTCGAGGACCCTCTCGA CCCGCCTTCGCCTTCG CTGCGTCGACGACCC GCAA CCTC GCGGGTTCGAGTCCCCGATCATTCGGCTCGTCTCCGAAGAGTACGGCGTC GCGGGGAC CCGC CCGTTCGTCTGCCCTCGCCGGGTTCCGGAACACCCGC CCGTGTACCAGC TGGAGGA GGCGACACCCTCGGGC TCGTCGTGGAGC TCGACGAGACGCGC TTCGACTTTGGTACGAACTACGAGCTGGAGTGTGAAACGGCGGAGCCCGAGCAGGCCAAGCAGGTCCTCGAGCGGTTGCTCACCGTGGCCGGCGTGCCGTATGAGTATTCCCGGAGCAATAAGTTTGCCTGCTTTATGGCTGGAAAGCTTCTTCCTTAACTAGGTGATACTCC TTGCTGTACTCTTGGTGATTTTAAGACATGATTATTGTTTCTGAGGCAT                                                                                        ]
[+] EMBL AU094372             [                                                                                                                                                              GGCTCGTCTCCGAAGAGTACGGCGTCGGCGGGGACGCCGCGCCGTTCGTCTG CCTCGGCGGGTTCCGGAACACCCGCGCCGTGTACCAGC TGGAGGAGGGCGACACCCTCGGGC TCGTCGTGGAGC TCGACGAGACGCGC TTCGACTTTGGTACGAACTACGAGCTGGAGTGTGAAACGGCGGAGCCCGAGCAGGCCAAGCAGGTCCTCGAGCGGTTGCTCACCGTGGCCGGCGTGCCGTATGAGTATTCCCGGAGCAATAAGTTTGCCTGCTTTATGGCTGGAAAGCTTCTTCCTTAACTAGGTGATACTCCATTGCTGTACTCTTGGTGATTTTAAGACATGATTATTGTTTCTGAGGCAATAACAATGTGTTAAGCAAAATATCGTTGTCTCTTGCAATTTCGCTATTCCAATTGTGAGGAAAATAAGATTCTGTTATGTTCAAAAAA]


>consensus_5963#0 GCCCCCTCCCGCGCCGTCCTCGCGCTCAAGCGNCGCCCGCGCATCGACGCGGGCGTCAGC GCGTCGANGANGGTCGAGGAGCCTCTCGACCCGCCATCGCCCTCGCTGCGTCGACGACCC GCAACCTCGCGGGGTCGAGTCCCCGATCATTCGGCTCGTCTCCGAAGAGTACGGCGTCGG CGGGGACGCCGCGCCGTTCGTCTGCCTCGGCGGGTTCCGGAACACCCGCGCCGTGTACCA GCTGGAGGAGGGCGACACCCTCGGGCTCGTCGTGGAGCTCGACGAGACGCGCTTCGACTT TGGTACGAACTACGAGCTGGAGTGTGAAACGGCGGAGCCCGAGCAGGCCAAGCAGGTCCT CGAGCGGTTGCTCACCGTGGCCGGCGTGCCGTATGAGTATTCCCGGAGCAATAAGTTTGC CTGCTTTATGGCTGGAAAGCTTCTTCCTTAACTAGGTGATACTCCTTGCTGTACTCTTGG TGATTTTAAGACATGATTATTGTTTCTGAGGCATTAACAATGTGTTAAGCAAAATATCGT TGTCTCTTGCAATTTCGCTATTCCAATTGTGAGGAAAATAAGATTCTGTTATGTTCAAAA AA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)