cluster # 5967

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Oryza sativa
cluster # 5967 cluster # 5967 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5967#0 length = 2642 sequences # 3
consensusID : consensus_5967#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2642
fasta sequence
                              [ATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTC-GGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAGCGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAGTTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGAGTGCTTACGTAGCATTGAGCCAGGTCGGTACAACTCTTTACCCTACCATCACCACCGCCAATTCGACCATGCCTGCCCACAAAGCCACCCCAAAGGCCTCAGTCACCCCGATAGCTAAGTATGACGCAGGCTGGAAGTTCGTGCAGTCGCCCAGCGCCGCTGGAGACGTTTCCCTGAAACATAAACTTGGCAAGAAATTGACCCTCGGTGTGGGCTTCACGGACAACACTGTGCGCAAAATCAAGTCCATCCCAGGCCTGGTGCTGTCAGCAGATGTACAGGCCAGGAACGACCTGAAGCTCTCTGTGTCACATAATTTGTCTGGCAAAGCCACCAAGTTGGGCTTCACACACGACCGTAGGATCAGCGGCAAGAAGACTACGTTCAAGGTGAACTACCTGACCAAGACCAAGGGCGCCACTGGCGAGGTCATCAGTGTACTCGCACCAAACAAGAGGGCAACTGTCGCCTTCACAGACAGACAGGTGACCAACGTGAAGATCGCCCTCACTGACGACCGTTGGACCTACGAGCCCAGCTACAACTTGGTCAAGAAGGCGCCCAGCCTAGCCATCAGCAGGCCCATGCACGGCGGCAAGTACAAATTTGGCTGGAACCTGAAGACTGACGACTTGAGCCTGGAGTACACCTACAAGGCACTCAAGTTTGTGGCATTCAAGGCGCCCTCACAGCAAGTGCCACGCGTTGCAGCCTCCATTGAGCACGACTTTGAGTTTTAACCAGACACTTGGCCAGCACGCACCGTGCCCATTGGACATGAACGATGCATGTTTGAGCTGAGCGCGTTCACTAGGCATGGTTGGCTCATGATTGGTGCATGGGAAGGCCGAGCATTAGCACGTCCACCGGGCACCCAGGGCAGTGTGTGGCGTGGGCCACAGGCGCACGCAATGTTGCCTTGTCTCAGGGGCCACCCGCAGCCATGCCTTGCCGCCGTGCAATGTGGCATGCGTGTTGAGCTAGTCAAGGACTGCTGTACAGAACGTGTGGTCATCTTCAGGTTTGTGTGCTGCTGCTGTGGCAGGTGTTGGCAGCCTCACAAAAGCGCTGCCTGCCTGCTGCTGTGTAGGGACGGTTGGCAGCATTTCTTTTTTCCGATTGGATATTCTGTCATTGCTAGTTTAATCTGCGTAGTTTCTGGCACTGGTTTACATAGCTACTGATGCTACACATAAATATAGATGTACAGCCAGACTGTGACGCACATATGTGCCACCCAAGGGTTGGTTGCATCATTCAGGTGCAGGTTGCAGATGGCACTGATTGCGTCAGCAACTGCTTCCGCTCTCGATTTTGCTGTGCCATGGTGTGATTTGGCCATCAACTGATTTTGTGTTGAAAGGGCAGGAGGGAGAGGGGGGTGCACTGAAACGCAGGCATACGTATTGGGTTGCAAAGCACGTTGTGTGGTTGACACAGCACGCTGTGCCTGATGCAAACTAGCTGGTTCCTGGCAAGTATGCTGTCCAGGCTACAGCTCCTGGCAGTTAGCTGTCCAGGTTGACACTCCTGGAACCTCAGGTCTGGAACGGTTTTGGCATCTTTGCACACCAGGCGGGCTCAGTGCAGTGCGCTGCTGCAGCAGGGACATCCATAGCAGCTCCTTGAACAACAGAAGCCTGTTGAAGCATGTTCTGCCTGACAGAATGCCAAGCACGACTGTAGTACGGGTGTCACTGCATGACGCAATGTCATTGCAGCTTGCATTACCTTTGCACGCCGTGTCTGTTCTGCTTCTGGCCGGCTATCAAGCCACGGGTATGCCCAGCGCATCTATGTAAAC]

[-] EMBL AU096034             [ATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTNGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGGNGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAGCGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU162854             [ TTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTC GGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK119873             [                                                                                                                                                                                                                                                                 CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTC GGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAGCGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAGTTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGAGTGCTTACGTAGCATTGAGCCAGGTCGGTACAACTCTTTACCCTACCATCACCACCGCCAATTCGACCATGCCTGCCCACAAAGCCACCCCAAAGGCCTCAGTCACCCCGATAGCTAAGTATGACGCAGGCTGGAAGTTCGTGCAGTCGCCCAGCGCCGCTGGAGACGTTTCCCTGAAACATAAACTTGGCAAGAAATTGACCCTCGGTGTGGGCTTCACGGACAACACTGTGCGCAAAATCAAGTCCATCCCAGGCCTGGTGCTGTCAGCAGATGTACAGGCCAGGAACGACCTGAAGCTCTCTGTGTCACATAATTTGTCTGGCAAAGCCACCAAGTTGGGCTTCACACACGACCGTAGGATCAGCGGCAAGAAGACTACGTTCAAGGTGAACTACCTGACCAAGACCAAGGGCGCCACTGGCGAGGTCATCAGTGTACTCGCACCAAACAAGAGGGCAACTGTCGCCTTCACAGACAGACAGGTGACCAACGTGAAGATCGCCCTCACTGACGACCGTTGGACCTACGAGCCCAGCTACAACTTGGTCAAGAAGGCGCCCAGCCTAGCCATCAGCAGGCCCATGCACGGCGGCAAGTACAAATTTGGCTGGAACCTGAAGACTGACGACTTGAGCCTGGAGTACACCTACAAGGCACTCAAGTTTGTGGCATTCAAGGCGCCCTCACAGCAAGTGCCACGCGTTGCAGCCTCCATTGAGCACGACTTTGAGTTTTAACCAGACACTTGGCCAGCACGCACCGTGCCCATTGGACATGAACGATGCATGTTTGAGCTGAGCGCGTTCACTAGGCATGGTTGGCTCATGATTGGTGCATGGGAAGGCCGAGCATTAGCACGTCCACCGGGCACCCAGGGCAGTGTGTGGCGTGGGCCACAGGCGCACGCAATGTTGCCTTGTCTCAGGGGCCACCCGCAGCCATGCCTTGCCGCCGTGCAATGTGGCATGCGTGTTGAGCTAGTCAAGGACTGCTGTACAGAACGTGTGGTCATCTTCAGGTTTGTGTGCTGCTGCTGTGGCAGGTGTTGGCAGCCTCACAAAAGCGCTGCCTGCCTGCTGCTGTGTAGGGACGGTTGGCAGCATTTCTTTTTTCCGATTGGATATTCTGTCATTGCTAGTTTAATCTGCGTAGTTTCTGGCACTGGTTTACATAGCTACTGATGCTACACATAAATATAGATGTACAGCCAGACTGTGACGCACATATGTGCCACCCAAGGGTTGGTTGCATCATTCAGGTGCAGGTTGCAGATGGCACTGATTGCGTCAGCAACTGCTTCCGCTCTCGATTTTGCTGTGCCATGGTGTGATTTGGCCATCAACTGATTTTGTGTTGAAAGGGCAGGAGGGAGAGGGGGGTGCACTGAAACGCAGGCATACGTATTGGGTTGCAAAGCACGTTGTGTGGTTGACACAGCACGCTGTGCCTGATGCAAACTAGCTGGTTCCTGGCAAGTATGCTGTCCAGGCTACAGCTCCTGGCAGTTAGCTGTCCAGGTTGACACTCCTGGAACCTCAGGTCTGGAACGGTTTTGGCATCTTTGCACACCAGGCGGGCTCAGTGCAGTGCGCTGCTGCAGCAGGGACATCCATAGCAGCTCCTTGAACAACAGAAGCCTGTTGAAGCATGTTCTGCCTGACAGAATGCCAAGCACGACTGTAGTACGGGTGTCACTGCATGACGCAATGTCATTGCAGCTTGCATTACCTTTGCACGCCGTGTCTGTTCTGCTTCTGGCCGGCTATCAAGCCACGGGTATGCCCAGCGCATCTATGTAAAC]




>consensus_5967#0
ATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGC
GCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAA
CGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAA
TACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTCTCTT
AAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTC
CCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATC
AGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAG
AGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTAACGTTAT
TTTACTTATTCCGTGAGTCGGAAGCGGGGCCTGGCCCCTCCTTTTGGCTCTAAGGCCCGA
GTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCA
CATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGT
GTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGA
AAGCGTGGCCTATCGATCCTTTAGACCTTCGGAGTTTGAAGCTAGAGGTGTCAGAAAAGT
TACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGAGT
GCTTACGTAGCATTGAGCCAGGTCGGTACAACTCTTTACCCTACCATCACCACCGCCAAT
TCGACCATGCCTGCCCACAAAGCCACCCCAAAGGCCTCAGTCACCCCGATAGCTAAGTAT
GACGCAGGCTGGAAGTTCGTGCAGTCGCCCAGCGCCGCTGGAGACGTTTCCCTGAAACAT
AAACTTGGCAAGAAATTGACCCTCGGTGTGGGCTTCACGGACAACACTGTGCGCAAAATC
AAGTCCATCCCAGGCCTGGTGCTGTCAGCAGATGTACAGGCCAGGAACGACCTGAAGCTC
TCTGTGTCACATAATTTGTCTGGCAAAGCCACCAAGTTGGGCTTCACACACGACCGTAGG
ATCAGCGGCAAGAAGACTACGTTCAAGGTGAACTACCTGACCAAGACCAAGGGCGCCACT
GGCGAGGTCATCAGTGTACTCGCACCAAACAAGAGGGCAACTGTCGCCTTCACAGACAGA
CAGGTGACCAACGTGAAGATCGCCCTCACTGACGACCGTTGGACCTACGAGCCCAGCTAC
AACTTGGTCAAGAAGGCGCCCAGCCTAGCCATCAGCAGGCCCATGCACGGCGGCAAGTAC
AAATTTGGCTGGAACCTGAAGACTGACGACTTGAGCCTGGAGTACACCTACAAGGCACTC
AAGTTTGTGGCATTCAAGGCGCCCTCACAGCAAGTGCCACGCGTTGCAGCCTCCATTGAG
CACGACTTTGAGTTTTAACCAGACACTTGGCCAGCACGCACCGTGCCCATTGGACATGAA
CGATGCATGTTTGAGCTGAGCGCGTTCACTAGGCATGGTTGGCTCATGATTGGTGCATGG
GAAGGCCGAGCATTAGCACGTCCACCGGGCACCCAGGGCAGTGTGTGGCGTGGGCCACAG
GCGCACGCAATGTTGCCTTGTCTCAGGGGCCACCCGCAGCCATGCCTTGCCGCCGTGCAA
TGTGGCATGCGTGTTGAGCTAGTCAAGGACTGCTGTACAGAACGTGTGGTCATCTTCAGG
TTTGTGTGCTGCTGCTGTGGCAGGTGTTGGCAGCCTCACAAAAGCGCTGCCTGCCTGCTG
CTGTGTAGGGACGGTTGGCAGCATTTCTTTTTTCCGATTGGATATTCTGTCATTGCTAGT
TTAATCTGCGTAGTTTCTGGCACTGGTTTACATAGCTACTGATGCTACACATAAATATAG
ATGTACAGCCAGACTGTGACGCACATATGTGCCACCCAAGGGTTGGTTGCATCATTCAGG
TGCAGGTTGCAGATGGCACTGATTGCGTCAGCAACTGCTTCCGCTCTCGATTTTGCTGTG
CCATGGTGTGATTTGGCCATCAACTGATTTTGTGTTGAAAGGGCAGGAGGGAGAGGGGGG
TGCACTGAAACGCAGGCATACGTATTGGGTTGCAAAGCACGTTGTGTGGTTGACACAGCA
CGCTGTGCCTGATGCAAACTAGCTGGTTCCTGGCAAGTATGCTGTCCAGGCTACAGCTCC
TGGCAGTTAGCTGTCCAGGTTGACACTCCTGGAACCTCAGGTCTGGAACGGTTTTGGCAT
CTTTGCACACCAGGCGGGCTCAGTGCAGTGCGCTGCTGCAGCAGGGACATCCATAGCAGC
TCCTTGAACAACAGAAGCCTGTTGAAGCATGTTCTGCCTGACAGAATGCCAAGCACGACT
GTAGTACGGGTGTCACTGCATGACGCAATGTCATTGCAGCTTGCATTACCTTTGCACGCC
GTGTCTGTTCTGCTTCTGGCCGGCTATCAAGCCACGGGTATGCCCAGCGCATCTATGTAA
AC
clustalw multiple alignements is not computed in this case