cluster # 5969

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Oryza sativa
cluster # 5969 cluster # 5969 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5969#0 length = 865 sequences # 3

consensusID : consensus_5969#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 865
fasta sequence

                              [TGGACTGAAGGAGTAGAAAAAGAAGTACTCGAGCAAAGAAGGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATAT-AGCCTTGTTTAATTGTCATCTCTGATTCGATGATGCCTCCACCTTGGTTCGGTGGTTCCAAGTTGTCACACGGTTTGTGTNTCACGGCGAGCCTTGGTTATGTTTGGGTCACCGGACACTCTTTGATCTAAGTATAAAGGGGTCTGGACCAGATATAGATCATGGGGAGCCTGTTGATTAAATATTTCAAACTCGGCTTGTAGATATCTCTGGGAGTGATTATTGGGAACTGTAATGCGTAGAGAATTGATACA]

[+] EMBL CF298366             [TGGACTGAAGGAGTAGAAAAAGAAGTACTCGAGCAAAGAAGGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGGCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATAT AGCCTTGTTTAATTGT                                                                                                                                                                                                                                              ]
[+] EMBL CF293803             [TGGACTGAAGGAGTAGAAAAAGATTTACTCGAGCAAAGAAGGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AW155010             [                             CGAGCAAAGAAGGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAAGTGCAGCTCATCAACTTCATCGNCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAGGCCGGCATCG CATATATAACCCTTG GTAATTGTCATCTCTGATTCGATGATGCCTCCACCTTGGTTCGGTGGTTCCAAGTTGTCACACGGTTTGTGTNTCACGGCGAGCCTTGGTTATGTTTGGGTCACCGGACACTCTTTGATCTAAGTATAAAGGGGTCTGGACCAGATATAGATCATGGGGAGCCTGTTGATTAAATATTTCAAACTCGGCTTGTAGATATCTCTGGGAGTGATTATTGGGAACTGTAATGCGTAGAGAATTGATACA]




>consensus_5969#0
TGGACTGAAGGAGTAGAAAAAGAAGTACTCGAGCAAAGAAGGAGAGAGCTTGGTGAGCTG
CAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGC
TCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACG
TCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGCCGATTGAGGGCATCAAGAAGT
TCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGT
ACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACC
GTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGC
CCATGTTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGG
CGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCA
TCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCA
TCGTCATATATAGCCTTGTTTAATTGTCATCTCTGATTCGATGATGCCTCCACCTTGGTT
CGGTGGTTCCAAGTTGTCACACGGTTTGTGTNTCACGGCGAGCCTTGGTTATGTTTGGGT
CACCGGACACTCTTTGATCTAAGTATAAAGGGGTCTGGACCAGATATAGATCATGGGGAG
CCTGTTGATTAAATATTTCAAACTCGGCTTGTAGATATCTCTGGGAGTGATTATTGGGAA
CTGTAATGCGTAGAGAATTGATACA

clustalw multiple alignements is not computed in this case