These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2161 fasta sequence [CAAATTCTCTCGCTCTCTCTCTCTCTCTCTCTCCCACTCCTCTCCCCTCTCCCTTCTCTCATCTCGCGCGCGGCGCGCCGCCGTAGAGACGAAATGGTGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCATTGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGATGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCACTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATTCTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTACATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCACTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGAAGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGGAAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAATGTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCCATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATACTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGGTCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCATGCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAAGTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAATGCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCAGTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAGCTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCGAGCAGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTTCTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAGCACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGAGGGTTCGTGTCGCAAGCGTCAGGAGCAACTAACATCGTAGTTCAGGTGCAGAAGACCACAAGTAGATATATCCATCCTATTCCTAGTTCCGGTGCTCAAGTTTGTGCAGATAGTCAGAGAGCACTCACGCACACGTAGATATCTGTCCATGCCGCTGTCCCAAATGGCAAATGGAGATAGACGCTACTATGTGCTAACACACACTCAAATTAAGCATTCAAAACGCAAAAAAAAA] [+] EMBL AK064028 [CAAATTCTCTCGCTCTCTCTCTCTCTCTCTCTCCCACTCCTCTCCCCTCTCCCTTCTCTCATCTCGCGCGCGGCGCGCCGCCGTAGAGACGAAATGGTGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCATTGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGATGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCACTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATTCTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTACATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCACTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGAAGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGGAAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAATGTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCCATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATACTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGGTCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCATGCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAAGTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAATGCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCAGTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAGCTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCG AGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTTCTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAGCACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGAGGGTTCGTGTCGCAAGCGTCAGGAGCAACTAACATCGTAGTTCAGGTGCAGAAGACCACAAGTAGATATATCCATCCTATTCCTAGTTCCGGTGCTCAAGTTTGTGCAGATAGTCAGAGAGCACTCACGCACACGTAGATATCTGTCCATGCCGCTGTCCCAAATGGCAAATGGAGATAGACGCTACTATGTGCTAACACACACTCAAATTAAGCA ] [+] EMBL AK102636 [ CCCCTCTCCCTTCTCTCATCTCGCGCGCGGCGCGCCGCCGTAGAGACGAAATGATGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCATTGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGATGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCACTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATTCTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTACATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCACTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGAAGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGGAAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAATGTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCCATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATACTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGGTCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCATGCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAAGTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAATGCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCAGTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAGCTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCGAGCAGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTTCTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAGCACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGAGGGTTCGTGTCGCAAGCGTCAGGAGCAACTAACATCGTAGTTCAGGTGCAGAAGACCACAAGTAGATATATCCATCCTATTCCTAGTTCCGGTGCTCAAGTTTGTGCAGATAGTCAGAGAGCACTCACGCACACGTAGATATCTGTCCATGCCGCTGTCCCAAATGGCAAATGGAGATAGACGCTACTATGTGCTAACACACACTCAAATTAAGCA ] [+] EMBL AB109238 [ CGCGCGCGGCGCGCCGCCGTAGAGACGAAATGGTGATGGCTCAGAAGACGAAGGAGGCGGAGATCACGGAGCAGGATTCGCTGCTTCTGACAAGGAATTTGCTCCGCATTGCTATATACAACATCAGCTACATCAGAGGTCTATTCCCTGAGAAGTACTTCAATGATAAGTCGGTTCCGGCACTAGAGATGAAGATTAAGAAGCTAATGCCCATGGATACTGAGTCGAGGAGGTTGATTGATTGGATGGAAAAAGGTGTCTATGATGCACTACAGAAGAAATATCTCAAGACCCTTCTCTTCTGCATCTGTGAGAAGGAGGAAGGCCCAATGATTGAGGAGTATGCATTCTCATTTAGCTACCCCAACACGAGCGGTGATGAAGTTGCAATGAACTTGAGCCGCACAGGGAGCAAGAAAAACAGTGCTACATTTAAATCAAATGCAGCAGAAGTCACTCCTGATCAGATGAGGAGCTCTGCTTGTAAGATGATAAGAACACTGGTTTCACTTATGAGGACCTTGGACCAAATGCCAGAGGAGAGGACCATTCTAATGAAGCTGCTATACTACGATGATGTCACACCTGAAGATTACGAGCCACCCTTTTTTAAGTGTTGCGCTGACAACGAGGCCATAAATATATGGAACAAGAACCCCTTGAAGATGGAAGTTGGAAATGTCAATAGCAAGCATCTCGTGTTAGCTTTGAAGGTCAAGAGTGTCCTTGACCCTTGTGATGATAACAATGTCAACAGTGAAGATGATAATATGAGCTTGGATAATGAATCTGACCAAGATAATGATTTTTCTGACACTGAGGTTCGCCCATCTGAAGCAGAGCGTTACATTGTTGCTCCAAATGATGGGACTTGCAAAGGTCAAAATGGTACAATCTCAGAAGATGATACTCAAGATCCTGTTCACGAGGAAGAGCTAACAGCTCAAGTAAGAGAGTGGATATGCTCAAGAGACACTGAAAGTCTTGAGGTTTCAGATGTCCTTGTTAATTTCCCCGACATATCAATGGAAATGGTTGAAGATATTATGGAGAGGCTACTTAAAGATGGTTTACTATCCAGAGCAAAAAAGGATAGTTATTCTGTTAATAAGATTGCTGATCCTACAACACCACACATAAAGAAAGAGGTCATCATGCAAAATGTCTCACCTACTGAAGGAACTAAAAATAGCAATGGTGATCTGATGTATATGAAGGCACTGTACCATGCACTTCCAATGGATTATGTGTCAGTAGGCAAACTTCATGGCAAGCTAGATGGGGAGGCCAGCCAGAACATGGTTCGTAAGTTGATTGAAAAAATGGTGCAAGACGGATATGTCAAGAATTCAGCCAACCGAAGACTAGGCAAAGCTGTCATTCATTCTGAAGTCACCAACAGAAAGCTCCTTGAGATAAAAAAGATTCTGGAAGTCGATATAGCCGAACAAATGGCCATTGATACCAATGCAGAACCTGGTGAGCCTGAGCGCAAAGACCACCTGAGTGGCCATGAAATGAGAGATGGATCGACGATGGGTTGCCTCCAGTCCGTCGGATCTGACCTCACCCGCACCCGGGAGCTTCCGGAGCCGCAGCAGAACGTGTCCATGCAGAGCGGGCAGGAAGCTTCCACGGTGGATAAGGATCCAAGCAGGACTCCTACAAGCGTGCGCGAGCAGGCGTCCGTTTGTTCCCTGGAGAGTGGGGTTCTCGGGCAGAAGGTCAGAAAGTCTTTGGCTGGTGCTGGCGGGACGCAGTGCTCGCAGGACAAGCGATTCAGGAAGGCCAGCACGGTGAAGGAGCCGATCCTCCAGTACGTCAAGCGCCAGAAGTCCCAAGTTCAAGTTCAAGTTCAGTGAGGGTTCGTGTCGCAAGCGTCAGGAGCAACTAACATCGTAGTTCAGGTGCAGAAGACCACAAGTAGATATATCCATCCTATTCCTAGTTCCGGTGCTCAAGTTTGTGCAGATAGTCAGAGAGCACTCACGCACACGTAGATATCTGTCCATGCCGCTGTCCCAAATGGCAAATGGAGATAGACGCTACTATGTGCTAACACACACTCAAATTAAGCATTCAAAACGCAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||