cluster # 6006

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Oryza sativa
cluster # 6006 cluster # 6006 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6006#0 length = 2525 sequences # 3
consensusID : consensus_6006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2525
fasta sequence
                              [GCATCTTCAGTCCCAAGCAACCCCAATTTTTCCTCTCTTTTTTTTCTTCTTCTTTTTGGTAATGCATGCCATGGCCATTACCATTCTGCTGCTACTGCTCCTCTCCTTCCATGGTGGTCGCCCACATGGCATAGAGCTCACAAGCTCGATCAGCTAATGGCCATCACTACCTCCAACTAACTAACCACCTTTTCTCTCCACTGCACAGCAACTTCATCAGTCCCATATCTATCAAGGCTATCACCATGAGTGTGCAAAATATTCATCCGGCCATGCCTCCCCTACAAATACAATCCCTGTCCTTGTCGTGGCCGTCGACATCGCCGGAGTCGGAGCGAAAGAAAGAACAGTGCTGGCACTAGGCCACTAGCTAAGTAGCTAGCTAGCTAGCTAGTAGCAGTGGTAGCTGAAGAGGAGGAGCTAGTTGATCAGCTGAGCTGAGCTAGAGGTAGAAGAAGAAGATGGACACCATTGAGGAGTGCAGTGTGGACGATGGACGCCGGCTGATGCTGCTGGGGTCGAGGATACTGGTCGGCGTGCCCAACAACTCCCGGGGATGCTCCGAGCTGCTCTCGTGGGCGATCCGCGTCGTCGCGAGGCCCAACGATTCGGTTGTCGCCGTCCATGTTCTTGGAGGGAGGGGGAGGAAGAACAGGCTGCAGAAGGCGAACGCGTTTGTGATCTACATGCTCGGGGAGTTTGTGGAGACTTGTGAGGCTAAACAGGTAAATTTGGAGGCCAAGGTGGTTTGCAGCCCAAGCATTTGGAGAGCACTTACCCAGGAAGCTACATTGACTGATGCAAACTTCCTCATTGTTGGGAGATCAGGAAATGCATATCGTAGGAATCATTTTGAGGTTGCAAACTACTGCTACATGAATGCTCCAAGAAACTGTTCAGTGATTGCAGTTGGAAGGGATGGTCTACCACAGAGCGCCGCTCGATTCAAGTCTCGATCATTTGATGACAGTAGTATCTTCTCAAGCTCAACATGGAGCAGGAGATTTCCACCACTTCAGAAGCTACTCAGATCAAACTCAGCGCGAAAACCGGCACAATCAACGGGTGAAGCCACAGAGGACAAGAGCTCACCAAGGGCAGTTCTTGATGGTCCAGAGGCAGGGGAGCAACATGTCACTGAAGAATGCTACAGCACAACATCTAGCAATGAGGTGAGCCGGCGTGGTCAAAATGGCATCTGGAGGAGGCTATCTGACATGAAGCTCTGGCTTCCATTCCTGCGGTCCATCGACGATGAAAACGTGAAAGGAGGTGATAATTCTTCGAATTATACTGAAGATCAGAAGCCTGCCTGGAGGTGTTTCAGCTACCAGGAGATTTCAGTTGCTACCAATGACTTCCATCCAGATAACATGGCTGGGAGAGGAGGCTATGCAGAAGTATACAAGGGTATCCTATCTGATGGACAATGTGTAGCTGTGAAGAGATTGGCACAAGGTAAGCCAACTGAACAGAAGGAAAAAGAGTTCCTGACAGAATTGGGAATCCAGGGACATGTCTGCCACCCAAACACAGCATACCTTCTTGGCTGCTGTGTTGAGAATGGACTCTATTTAGTATTCGAGTTCTGCGAAAACGGGACACTTGCATCGGCACTGCACGGGAAGAGTGCCAAAATCCTTGAGTGGCCTTTGAGGTACAAGATTGCGGTAGGTGTCGCGAGGGGCTTGCAGTATCTGCACATGTTCTGTAGGCACCGGATCATCCATCGCGACATCAAAGCCTCCAATGTGCTACTTGGTGATGATTTTGAGCCTCAGATATCAGACTTCGGACTGGCAAAGTGGCTTCCCAAGCAGTGGACTCATCACTCTGTCATACCTATAGAGGGCACATTTGGGTATTTAGCACCAGAGTACTTCATGCATGGCATTGTCGATGAGAAGACCGACATTTTCGCATTCGGAGTTTTGCTGCTAGAGATTGTCACTGGAAGGAGGCCTATTGACTGCTCCAAGCTGAGCCTTCTTCAGTGGGCAAAGCCACTTCTTGAAGCTGGACAAGTGACTGAACTTGCAGACCCGAATCTCGGCGGCGATTATGACAAGGATCAGCTGAAGAGGATGGTCGCAGTCGCGTCACGCTGCATTATGCGACCGGCGATGTGGCGGCCCTCCATGGCTGAGGTGCTGCATTTCCTGTCAACTGATGAGTGCCTGAAGGAGCCGGAGAAGTGGAACATTCCGGAAGACGAGGTCGACGACATGGATGATTGCACTATGTTTTCTGAATCTTTGTCTCCATGAAGACAGGCTCTGATATTATTTGGTCTTTGGCATGGCTGTTCTTCATGGTGATGTCA-AGTGCTACCTTTTATGTTTCTTCTCTTGGTTTTGGAATGTTAGGTGCTTGGTATGTAATCATGCAATTTAGGGAGAAGATTTTGAAGATATGGTTCGAATTTATCTTTTTATGGATGAACATAAAAAGATCACATTTTCCTGTAAATTATTCATGAGAAAATTTGGTGCTGTTGAGCCAAGCATATATCATGTGCACTAATA]

[+] EMBL AK111692             [GCATCTTCAGTCCCAAGCAACCCCAATTTTTCCTCTCTTTTTTTTCTTCTTCTTTTTGGTAATGCATGCCATGGCCATTACCATTCTGCTGCTACTGCTCCTCTCCTTCCATGGTGGTCGCCCACATGGCATAGAGCTCACAAGCTCGATCAGCTAATGGCCATCACTACCTCCAACTAACTAACCACCTTTTCTCTCCACTGCACAGCAACTTCATCAGTCCCATATCTATCAAGGCTATCACCATGAGTGTGCAAAATATTCATCCGGCCATGCCTCCCCTACAAATACAATCCCTGTCCTTGTCGTGGCCGTCGACATCGCCGGAGTCGGAGCGAAAGAAAGAACAGTGCTGGCACTAGGCCACTAGCTAAGTAGCTAGCTAGCTAGCTAGTAGCAGTGGTAGCTGAAGAGGAGGAGCTAGTTGATCAGCTGAGCTGAGCTAGAGGTAGAAGAAGAAGATGGACACCATTGAGGAGTGCAGTGTGGACGATGGACGCCGGCTGATGCTGCTGGGGTCGAGGATACTGGTCGGCGTGCCCAACAACTCCCGGGGATGCTCCGAGCTGCTCTCGTGGGCGATCCGCGTCGTCGCGAGGCCCAACGATTCGGTTGTCGCCGTCCATGTTCTTGGAGGGAGGGGGAGGAAGAACAGGCTGCAGAAGGCGAACGCGTTTGTGATCTACATGCTCGGGGAGTTTGTGGAGACTTGTGAGGCTAAACAGGTAAATTTGGAGGCCAAGGTGGTTTGCAGCCCAAGCATTTGGAGAGCACTTACCCAGGAAGCTACATTGACTGATGCAAACTTCCTCATTGTTGGGAGATCAGGAAATGCATATCGTAGGAATCATTTTGAGGTTGCAAACTACTGCTACATGAATGCTCCAAGAAACTGTTCAGTGATTGCAGTTGGAAGGGATGGTCTACCACAGAGCGCCGCTCGATTCAAGTCTCGATCATTTGATGACAGTAGTATCTTCTCAAGCTCAACATGGAGCAGGAGATTTCCACCACTTCAGAAGCTACTCAGATCAAACTCAGCGCGAAAACCGGCACAATCAACGGGTGAAGCCACAGAGGACAAGAGCTCACCAAGGGCAGTTCTTGATGGTCCAGAGGCAGGGGAGCAACATGTCACTGAAGAATGCTACAGCACAACATCTAGCAATGAGGTGAGCCGGCGTGGTCAAAATGGCATCTGGAGGAGGCTATCTGACATGAAGCTCTGGCTTCCATTCCTGCGGTCCATCGACGATGAAAACGTGAAAGGAGGTGATAATTCTTCGAATTATACTGAAGATCAGAAGCCTGCCTGGAGGTGTTTCAGCTACCAGGAGATTTCAGTTGCTACCAATGACTTCCATCCAGATAACATGGCTGGGAGAGGAGGCTATGCAGAAGTATACAAGGGTATCCTATCTGATGGACAATGTGTAGCTGTGAAGAGATTGGCACAAGGTAAGCCAACTGAACAGAAGGAAAAAGAGTTCCTGACAGAATTGGGAATCCAGGGACATGTCTGCCACCCAAACACAGCATACCTTCTTGGCTGCTGTGTTGAGAATGGACTCTATTTAGTATTCGAGTTCTGCGAAAACGGGACACTTGCATCGGCACTGCACGGGAAGAGTGCCAAAATCCTTGAGTGGCCTTTGAGGTACAAGATTGCGGTAGGTGTCGCGAGGGGCTTGCAGTATCTGCACATGTTCTGTAGGCACCGGATCATCCATCGCGACATCAAAGCCTCCAATGTGCTACTTGGTGATGATTTTGAGCCTCAGATATCAGACTTCGGACTGGCAAAGTGGCTTCCCAAGCAGTGGACTCATCACTCTGTCATACCTATAGAGGGCACATTTGGGTATTTAGCACCAGAGTACTTCATGCATGGCATTGTCGATGAGAAGACCGACATTTTCGCATTCGGAGTTTTGCTGCTAGAGATTGTCACTGGAAGGAGGCCTATTGACTGCTCCAAGCTGAGCCTTCTTCAGTGGGCAAAGCCACTTCTTGAAGCTGGACAAGTGACTGAACTTGCAGACCCGAATCTCGGCGGCGATTATGACAAGGATCAGCTGAAGAGGATGGTCGCAGTCGCGTCACGCTGCATTATGCGACCGGCGATGTGGCGGCCCTCCATGGCTGAGGTGCTGCATTTCCTGTCAACTGATGAGTGCCTGAAGGAGCCGGAGAAGTGGAACATTCCGGAAGACGAGGTCGACGACATGGATGATTGCACTATGTTTTCTGAATCTTTGTCTCCATGAAGACAGGCTCTGATATTATTTGGTCTTTGGCATGGCTGTTCTTCATGGTGATGTCA AGTGCTACCTTTTATGTTTCTTCTCTTGGTTTTGGAATGTTAGGTGCTTGGTATGTAATCATGCAATTTAGGGAGAAGATTTTGAAGATATGGTTCGAATTTATCTTTTTATGGATGAACATAAAAAGATCACATTTTCCTGTAAATTATTCATGAGAAAATTTGGTGCTGTTGAGCCAAGCATATATCATGTGCACTAATA]
[+] EMBL CF305160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAGCAATGAGGTGAGCCGGCGTGGTCAAAATGGCATCTGGAGGAGGCTATCTGACATGAAGCTCTGGCTTCCATTCCTGCGGTCCATCGACGATGAAAACGTGAAAGGAGGTGATAATTCTTCGAATTATACTGAAGATCAGAAGCCTGCCTGGAGGTGTTTCAGCTACCAGGAGATTTCAGTTGCTACCAATGACTTCCATCCAGATAACATGGCTGGGAGAGGAGGCTATGCAGAAGTATACAAGGGTATCCTATCTGATGGACAATGTGTAGCTGTGAAGAGATTGGCACAAGGTAAGCCAACTGAACAGAAGGAAAAAGAGTTCCTGACAGAATTGGGAATCCAGGGACATGTCTGCCACCCAAACACAGCATACCTTCTTGGCTGCTGTGTTGAGAATGGACTCTATTTAGTATTCGAGTTCTGCGAAAACGGGACACTTGCATCGGCACTGCACGGGAAGAGTGCCAAAATCCTTGAGTGGCCTTTGAGGTACAAGATTGCGGTAGGTGTCGCGAGGGGCTTGCAGTATCTGCACATGTTCTGTAGGCACCGGATCATCCATCGCGACATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI804520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAGCCACTTCTTGAAGCTGGACAAGTGACTGAACTTGCAGACCCGAATCTC GCGGCGATTATGACAAGGATCAGCTGAAGAGGATGGTCGCAGTCGCGTCACGCTGCATTATGCGACCGGCGATGTGGCGGCCCTCCATGGCTGAGGTGCTGCATTTCCTGTCAACTGATGAGTGCCTGAAGGAGCCGGAGAAGTGGAACATTCCGGAAGACGAGGTCGACGACATGGATGATTGCACTATGTTTTCTGAATCTTTGTCTCCATGAAGACAGGCTCTGATATTATTTGGTCTTTGGCATGGCTGTTCTTCATGGTGATGTCACAGTGCTACCTTTTATGTTTCTTCTCTTGGTTTTGGAATGTTAGGTGCTTGGTATGTAATCATGCAATTTAGGGAGAAGATTTTGAAGATATGGTTCGAATTTATCTTTTTATGGATGAACATAAAAAGATCACATTTTCCTGTAAATTATTCATGAGAAAATTTGGTGCTGTTGAGCCAAGCATAaaaaaaaaa        ]




>consensus_6006#0
GCATCTTCAGTCCCAAGCAACCCCAATTTTTCCTCTCTTTTTTTTCTTCTTCTTTTTGGT
AATGCATGCCATGGCCATTACCATTCTGCTGCTACTGCTCCTCTCCTTCCATGGTGGTCG
CCCACATGGCATAGAGCTCACAAGCTCGATCAGCTAATGGCCATCACTACCTCCAACTAA
CTAACCACCTTTTCTCTCCACTGCACAGCAACTTCATCAGTCCCATATCTATCAAGGCTA
TCACCATGAGTGTGCAAAATATTCATCCGGCCATGCCTCCCCTACAAATACAATCCCTGT
CCTTGTCGTGGCCGTCGACATCGCCGGAGTCGGAGCGAAAGAAAGAACAGTGCTGGCACT
AGGCCACTAGCTAAGTAGCTAGCTAGCTAGCTAGTAGCAGTGGTAGCTGAAGAGGAGGAG
CTAGTTGATCAGCTGAGCTGAGCTAGAGGTAGAAGAAGAAGATGGACACCATTGAGGAGT
GCAGTGTGGACGATGGACGCCGGCTGATGCTGCTGGGGTCGAGGATACTGGTCGGCGTGC
CCAACAACTCCCGGGGATGCTCCGAGCTGCTCTCGTGGGCGATCCGCGTCGTCGCGAGGC
CCAACGATTCGGTTGTCGCCGTCCATGTTCTTGGAGGGAGGGGGAGGAAGAACAGGCTGC
AGAAGGCGAACGCGTTTGTGATCTACATGCTCGGGGAGTTTGTGGAGACTTGTGAGGCTA
AACAGGTAAATTTGGAGGCCAAGGTGGTTTGCAGCCCAAGCATTTGGAGAGCACTTACCC
AGGAAGCTACATTGACTGATGCAAACTTCCTCATTGTTGGGAGATCAGGAAATGCATATC
GTAGGAATCATTTTGAGGTTGCAAACTACTGCTACATGAATGCTCCAAGAAACTGTTCAG
TGATTGCAGTTGGAAGGGATGGTCTACCACAGAGCGCCGCTCGATTCAAGTCTCGATCAT
TTGATGACAGTAGTATCTTCTCAAGCTCAACATGGAGCAGGAGATTTCCACCACTTCAGA
AGCTACTCAGATCAAACTCAGCGCGAAAACCGGCACAATCAACGGGTGAAGCCACAGAGG
ACAAGAGCTCACCAAGGGCAGTTCTTGATGGTCCAGAGGCAGGGGAGCAACATGTCACTG
AAGAATGCTACAGCACAACATCTAGCAATGAGGTGAGCCGGCGTGGTCAAAATGGCATCT
GGAGGAGGCTATCTGACATGAAGCTCTGGCTTCCATTCCTGCGGTCCATCGACGATGAAA
ACGTGAAAGGAGGTGATAATTCTTCGAATTATACTGAAGATCAGAAGCCTGCCTGGAGGT
GTTTCAGCTACCAGGAGATTTCAGTTGCTACCAATGACTTCCATCCAGATAACATGGCTG
GGAGAGGAGGCTATGCAGAAGTATACAAGGGTATCCTATCTGATGGACAATGTGTAGCTG
TGAAGAGATTGGCACAAGGTAAGCCAACTGAACAGAAGGAAAAAGAGTTCCTGACAGAAT
TGGGAATCCAGGGACATGTCTGCCACCCAAACACAGCATACCTTCTTGGCTGCTGTGTTG
AGAATGGACTCTATTTAGTATTCGAGTTCTGCGAAAACGGGACACTTGCATCGGCACTGC
ACGGGAAGAGTGCCAAAATCCTTGAGTGGCCTTTGAGGTACAAGATTGCGGTAGGTGTCG
CGAGGGGCTTGCAGTATCTGCACATGTTCTGTAGGCACCGGATCATCCATCGCGACATCA
AAGCCTCCAATGTGCTACTTGGTGATGATTTTGAGCCTCAGATATCAGACTTCGGACTGG
CAAAGTGGCTTCCCAAGCAGTGGACTCATCACTCTGTCATACCTATAGAGGGCACATTTG
GGTATTTAGCACCAGAGTACTTCATGCATGGCATTGTCGATGAGAAGACCGACATTTTCG
CATTCGGAGTTTTGCTGCTAGAGATTGTCACTGGAAGGAGGCCTATTGACTGCTCCAAGC
TGAGCCTTCTTCAGTGGGCAAAGCCACTTCTTGAAGCTGGACAAGTGACTGAACTTGCAG
ACCCGAATCTCGGCGGCGATTATGACAAGGATCAGCTGAAGAGGATGGTCGCAGTCGCGT
CACGCTGCATTATGCGACCGGCGATGTGGCGGCCCTCCATGGCTGAGGTGCTGCATTTCC
TGTCAACTGATGAGTGCCTGAAGGAGCCGGAGAAGTGGAACATTCCGGAAGACGAGGTCG
ACGACATGGATGATTGCACTATGTTTTCTGAATCTTTGTCTCCATGAAGACAGGCTCTGA
TATTATTTGGTCTTTGGCATGGCTGTTCTTCATGGTGATGTCAAGTGCTACCTTTTATGT
TTCTTCTCTTGGTTTTGGAATGTTAGGTGCTTGGTATGTAATCATGCAATTTAGGGAGAA
GATTTTGAAGATATGGTTCGAATTTATCTTTTTATGGATGAACATAAAAAGATCACATTT
TCCTGTAAATTATTCATGAGAAAATTTGGTGCTGTTGAGCCAAGCATATATCATGTGCAC
TAATA
clustalw multiple alignements is not computed in this case