cluster # 6008

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Oryza sativa
cluster # 6008 cluster # 6008 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6008#0 length = 548 sequences # 3

consensusID : consensus_6008#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 548
fasta sequence

                              [CCACGGCGGCGGCGGCGAAGGCGAAGGTGAAGGTG-AAGGTGCTCTTCTTCGCCCGCGCGCGGGACCTGACGGGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAGACTGCCTCGCCCGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTCAACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATCCCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCCCCCCAATTCGAAGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCTTTCCTCTTCTTTCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTGAGTAATAAGCATCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAATCATGTTGATGAATCTTGAATCACATTTCGATTTGAAGTGATATATGTGTGTGCTTCTTGTCAAAAAA]

[+] EMBL CB000099             [CCACGGCGGCGGCGGCGAAGGCGAAGGGGAAGGCG TAGGTGCTCTTCTTCGCCCGCGCGCGGGACCTGACGGGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAGACTGCCTCGCCCGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTCAACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATCCCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCCCCCCAATTCGAAGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCTTTCCTCTTCTTTCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTGAGTAATAAGCATCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAATCATGTTGATGAATCGTGAATCACATTTC                                       ]
[+] EMBL CA998413             [  ACGGCGGCGGCGGCGAAGGCGAAGGTGAAGGTG AAGGTGCTCTTCTTCGCCCGCGCGCGGGACCTGACGGGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAGACTGCCTCGCCCGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTCAACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATCCCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCCCCCCAATTCGAAGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCTTTCCTCTTCTTTCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTGAGTAATAAGCATCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAATCATGTTGATGAATCTTGAATCACATT                                         ]
[+] EMBL AU071158             [                         aGTGAAGNTGAAAGGTGCTCTTCTTCGCCCGCGCGCGGGACTTNACGGGCTTGACGGAGGCCCCGGTGGNGGTGCCGGCNGGGAGCACGGCGGGAGACTGCCTCGCCCGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTCAACGAGGNGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATCCCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCCCCCCAATTCGAAGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCTTTCCTCTTCTTTCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTGAGTAATAAGCATCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAATCATGTTGATGAATCTTGAATCACATTTCGATTTGAAGTGATATATGTGTGTGCTTCTTGTCAAAAAA]




>consensus_6008#0
CCACGGCGGCGGCGGCGAAGGCGAAGGTGAAGGTGAAGGTGCTCTTCTTCGCCCGCGCGC
GGGACCTGACGGGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAG
ACTGCCTCGCCCGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGG
TGCTCGCGCTCAACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGC
TCGCCATCATCCCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCC
CCCCAATTCGAAGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCT
TTCCTCTTCTTTCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTG
AGTAATAAGCATCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAA
TCATGTTGATGAATCTTGAATCACATTTCGATTTGAAGTGATATATGTGTGTGCTTCTTG
TCAAAAAA

clustalw multiple alignements is not computed in this case