cluster # 6030

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6030 cluster # 6030 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6030#0 length = 818 sequences # 3

consensusID : consensus_6030#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 818
fasta sequence

                              [CTCCCCATCCCCTCGCCGCGCCGCGCCGCCGGCGAACCCCCCTAGCGCTAGGCCAGCCGTCGCCGCGCGCCCCGCACCCTCTCCTCCGCCGCCGGGCCTGTCGCCACCACCGCCGCGAGGCCTCGGTGGTGGTCGAGGACGCCATGCCCAAGGCGAAGAAGAACCCTCATGTCTTCTTTGACATAGCGATCGGCGGACGCGCCGCTGAGAGGATCACATTTGAGCTGTTTGCGGATGTCGTTCCGAAGACCACGGAGAATTTCCGGGCTCTCTGCACGGGTGAGAGAGGCCTTGGAGTATCTACACAAAAGCCACTTTATTTTAAGGGAACAAACATGCATCGCATTCTGAAAGGTTTTATGGCTCAGGGTGGTGATTTTTCAAGAGGAGATGGACGTGGTGGAGAGAGCATATATGGTGCAAAATTTAAAGATGAAAACTTCAAGTTAAAGCATGACCAACCTGGTGTTCTTTCCATGGCAAATGCTGGACCAGACAGTAATGGATCCCAGTTTTTTATAACATTCGTGCCAACACCACATCTTGATGGCAAACATGTGGTCTTTGGGAAGGTGGTCACTGGAATGCCCTTGCTGAAGAAGCTTGAAGCGGTAGGTTCTGATACCGGAAAGCCTACTTGTGAAGTGAAAATCGTGGACTGTGGTGAAGTCTCTGATTCCCAGAATCAGCTAAAGGGAGAGAAAGAAAAGAAGCTCAGAAGAACAGAAGACAGTTCTGCTGCTGAAAAAAGGGTCAAAACCCAAAAACCACCTACTC-ATGATAAACAAAAGAAAAAGAGAAAGCATTATTCTTCTGAT]

[+] EMBL CB634373             [CTCCCCATCCCCTCGCCGCGCCGCGCCGCCGGCGAACCCCCCTAGCGCTAGGCCAGCCGTCGCCGCGCGCCCCGCACCCTCTCCTCCGCCGCCGGGCCTGTCGCCACCACCGCCGCGAGGCCTCGGTGGTGGTCGAGGACGCCATGCCCAAGGCGAAGAAGAACCCTCATGTCTTCTTTGACATAGCGATCGGCGGACGCGCCGCTGAGAGGATCACATTTGAGCTGTTTGCGGATGTCGTTCCGAAGACCACGGAGAATTTCCGGGCTCTCTGCACGGGTGAGAGAGGCCTTGGAGTATCTACACAAAAGCCACTTTATTTTAAGGGAACAAACATGCATCGCATTCTGAAAGGTTTTATGGCTCAGGGTGGTGATTTTTCAAGAGGAGATGGACGTGGTGGAGAGAGCATATATGGTGCAAAATTTAAAGATGAAAACTTCAAGTTAAAGCATGACCAACCTGGTGTTCTTTCCATGGCAAATGCTGGACCAGACAGTAATGGATCCCAGTTTTTTATAACATTCGTGCCAACACCACATCTTGATGGCAAACATGTGGTCTTTGGGAAGGTGGTCACTGGAATGCCCTTGCTGAAGAAGCTTGAAGCGGTAGGTTCTGATACCGGAAAGCCTACTTGTGAAGTGAAAATCGTGGACTGTGGTGAAGTCTCTGATTCCCAGAATCAGCTAAAGGGAGAGAAAGAAAAGAAGCTCAGAAGAACAGAAGACAGTTCTGCTGCTGAAAAAAGGGTCAAAACCCAAAAACCACCTACTC ATGATAAACAAAAGAAAAAGAGAAAGCATTATTCTTCTGAT]
[+] EMBL CB635661             [CTCCCCATCCCCTCGCCGCGCCGCGCCGCCGGCGAACCCCCCTAGCGCTAGGCCAGCCGTCGCCGCGCGCCCCGCACCCTCTCCTCCGCCGCCGGGCCTGTCGCCACCACCGCCGCGAGGCCTCGGTGGTGGTCGAGGACGCCATGCCCAAGGCGAAGAAGAACCCTCATGTCTTCTTTGACATAGCGATCGGCGGACGCGCCGCTGAGAGGATCACATTTGAGCTGTTTGCGGATGTCGTTCCGAAGACCACGGAGAATTTCCGGGCTCTCTGCACGGGTGAGAGAGGCCTTGGAGTATCTACACAAAAGCCACTTTATTTTAAGGGAACAAACATGCATCGCATTCTGAAAGGTTTTATGGCTCAGGGTGGTGATTTTTCAAGAGGAGATGGACGTGGTGGAGAGAGCATATATGGTGCAAAATTTAAAGATGAAAACTTCAAGTTAAAGCATGACCAACCTGGTGTTCTTTCCATGGCAAATGCTGGACCAGACAGTAATGGATCCCAGTTTTTTATAACATTCGTGCCAACACCACATCTTGATGGCAAACATGTGGTCTTTGGGAAGGTGGTCACTGGAATGCCCTTGCTGAAGAAGCTTGAAGCGGTAGGTTCTGATACCGGAAAGCCTACTTGTGAAGTGAAAATCGTGGACTGTGGTGAAGTCTCTGATTCCCAGAATCAGCTAAAGGGAGAGAAAGAAAAGAAGCTCAGAAGAACAGAAGACAGTTCTGCTGCTG AAAAAGGGTCAAAACCC AAAACCACCTACTCGATGATAAca                                ]
[+] EMBL CB635663             [CTCCCCATCCCCTCGCCGCGCCGCGCCGCCGGCGAACCCCCCTAGCGCTAGGCCAGCCGTCGCCGCGCGCCCCGCACCCTCTCCTCCGCCGCCGGGCCTGTCGCCACCACCGCCGCGAGGCCTCGGTGGTGGTCGAGGACGCCATGCCCAAGGCGAAGAAGAACCCTCATGTCTTCTTTGACATAGCGATCGGCGGACGCGCCGCTGAGAGGATCACATTTGAGCTGTTTGCGGATGTCGTTCCGAAGACCACGGAGAATTTCCGGGCTCTCTGCACGGGTGAGAGAGGCCTTGGAGTATCTACACAAAAGCCACTTTATTTTAAGGGAACAAACATGCATCGCATTCTGAAAGGTTTTATGGCTCAGGGTGGTGATTTTTCAAGAGGAGATGGACGTGGTGGAGAGAGCATATATGGTGCAAAATTTAAAGATGAAAACTTCAAGTTAAAGCATGACCAACCTGGTGTTCTTTCCATGGCAAATGCTGGACCAGACAGTAATGGATCCCAGTTTTTTATAACATTCGTGCCAACACCACATCTTGATGGCAAACATGTGGTCTTTGGGAAGGTGGTCACTGGAATGCCCTTGCTGAAGAAGCTTGAAGCGGTAGGTTCTGATACCGGAAAGCCTACTTGTGAAGTGAAAATCGTGGACTGTGGTGAAGTCTCTGATTCCCAGAATCAGCTAAAGGGAGAGAAAGAAAAGAAGCTCAGAAGAACAGAAGACAGTTCTGCTGCTGAAAAAAGGGTCAAAACCCAAAA                                                     ]




>consensus_6030#0
CTCCCCATCCCCTCGCCGCGCCGCGCCGCCGGCGAACCCCCCTAGCGCTAGGCCAGCCGT
CGCCGCGCGCCCCGCACCCTCTCCTCCGCCGCCGGGCCTGTCGCCACCACCGCCGCGAGG
CCTCGGTGGTGGTCGAGGACGCCATGCCCAAGGCGAAGAAGAACCCTCATGTCTTCTTTG
ACATAGCGATCGGCGGACGCGCCGCTGAGAGGATCACATTTGAGCTGTTTGCGGATGTCG
TTCCGAAGACCACGGAGAATTTCCGGGCTCTCTGCACGGGTGAGAGAGGCCTTGGAGTAT
CTACACAAAAGCCACTTTATTTTAAGGGAACAAACATGCATCGCATTCTGAAAGGTTTTA
TGGCTCAGGGTGGTGATTTTTCAAGAGGAGATGGACGTGGTGGAGAGAGCATATATGGTG
CAAAATTTAAAGATGAAAACTTCAAGTTAAAGCATGACCAACCTGGTGTTCTTTCCATGG
CAAATGCTGGACCAGACAGTAATGGATCCCAGTTTTTTATAACATTCGTGCCAACACCAC
ATCTTGATGGCAAACATGTGGTCTTTGGGAAGGTGGTCACTGGAATGCCCTTGCTGAAGA
AGCTTGAAGCGGTAGGTTCTGATACCGGAAAGCCTACTTGTGAAGTGAAAATCGTGGACT
GTGGTGAAGTCTCTGATTCCCAGAATCAGCTAAAGGGAGAGAAAGAAAAGAAGCTCAGAA
GAACAGAAGACAGTTCTGCTGCTGAAAAAAGGGTCAAAACCCAAAAACCACCTACTCATG
ATAAACAAAAGAAAAAGAGAAAGCATTATTCTTCTGAT

clustalw multiple alignements is not computed in this case