cluster # 6039

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Oryza sativa
cluster # 6039 cluster # 6039 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6039#0 length = 1800 sequences # 1

consensus_6039#1 length = 862 sequences # 1
consensus_6039#2 length = 745 sequences # 1

consensusID : consensus_6039#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1800
fasta sequence

                              [ACACTCATTCTCTAGAGAAGGGAGAGAGAAGAGTGTAGTAGTAGCTAGCTAGGAGAAAGAGAGAGATAGAGAGAGAAACAATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTGATGATCATGAGAGACAAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGCCCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCGGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTGCCGGGGAGGTGGTGGCCGGCGGCGACGGTGGCGGTGGCGCCGCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGATGATCATTAATTTGATCGCTTATTAAGTGGTTAAATTATTCAGTTAATTAATGATCGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCAGCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTCATTTTGTTTCTAATTTCTTTCTCTCTGTTTTTTTTTTGGTGAATGATTGATCGATCTCAATGTACTGAGGTTGGTTAATTTTTCTTGCTGCTGGTTAATTTGGGCTTAATTTTGATCTTGGAGTAACTAGAAAACATGTAATTCATCGTGTTGAGGATGAGCAATGCAAGAAAGAAAATA]

[+] EMBL AK069508             [ACACTCATTCTCTAGAGAAGGGAGAGAGAAGAGTGTAGTAGTAGCTAGCTAGGAGAAAGAGAGAGATAGAGAGAGAAACAATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTGATGATCATGAGAGACAAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGCCCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCGGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTGCCGGGGAGGTGGTGGCCGGCGGCGACGGTGGCGGTGGCGCCGCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGATGATCATTAATTTGATCGCTTATTAAGTGGTTAAATTATTCAGTTAATTAATGATCGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCAGCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTCATTTTGTTTCTAATTTCTTTCTCTCTGTTTTTTTTTTGGTGAATGATTGATCGATCTCAATGTACTGAGGTTGGTTAATTTTTCTTGCTGCTGGTTAATTTGGGCTTAATTTTGATCTTGGAGTAACTAGAAAACATGTAATTCATCGTGTTGAGGATGAGCAATGCAAGAAAGAAAATA]




>consensus_6039#0
ACACTCATTCTCTAGAGAAGGGAGAGAGAAGAGTGTAGTAGTAGCTAGCTAGGAGAAAGA
GAGAGATAGAGAGAGAAACAATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTG
ATGATCATGAGAGACAAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGG
TCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGC
CCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATT
GCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTC
GCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCGGTATGTCAACCTGT
GGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGG
TGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGT
ACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACA
TCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCG
GCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCG
CCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCG
CCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGC
CGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCT
TCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACA
TCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCG
TCATCGTCCACCTCATCGGCGCCTACCAAGTGTTCGCGCAGCCGATCTTCGCGAGGCTGG
AGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGA
GGGTGCCGGGGAGGTGGTGGCCGGCGGCGACGGTGGCGGTGGCGCCGCTGAAGCTGGTGC
TGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACG
CCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCGGTGA
GCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCGCGGTGGTGGTCGCTGCAGG
CCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACA
TCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGATGATCATTA
ATTTGATCGCTTATTAAGTGGTTAAATTATTCAGTTAATTAATGATCGATGATCTAGTTG
TTAGCTCAGCAACAAGCACCATCAGCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTC
ATTTTGTTTCTAATTTCTTTCTCTCTGTTTTTTTTTTGGTGAATGATTGATCGATCTCAA
TGTACTGAGGTTGGTTAATTTTTCTTGCTGCTGGTTAATTTGGGCTTAATTTTGATCTTG
GAGTAACTAGAAAACATGTAATTCATCGTGTTGAGGATGAGCAATGCAAGAAAGAAAATA

consensusID : consensus_6039#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 862
fasta sequence

                              [TTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTAATTACCCATCATCGTCTCACTTCCTCGTTAATGGCGGGCGGCGATCGACGATGATCTTATGTTTGAT]

[+] EMBL CB643751             [TTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTAATTACCCATCATCGTCTCACTTCCTCGTTAATGGCGGGCGGCGATCGACGATGATCTTATGTTTGAT]




>consensus_6039#1
TTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGAC
CCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCG
AAGAACGTGATGTTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGGGTACACTTGTCGGG
TACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGG
GAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGC
GTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTC
GTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAG
TGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCC
CGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTC
GCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACC
ATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGC
TGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCC
TTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATC
GGCGCCTACCAAGTAATTACCCATCATCGTCTCACTTCCTCGTTAATGGCGGGCGGCGAT
CGACGATGATCTTATGTTTGAT

consensusID : consensus_6039#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 745
fasta sequence

                              [TGATCTTATGTTTGATAATTTGCTGCAGGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTCCCGGGGAGGTGGTGGCCGGCGGCGACGGTGCCGGTGGCGCCTCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGCCCTCATCGGGGCGCTCGGCTTCTGCCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCCCCCCGGCGAACCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGACGATCATTAATTTGATCGCTTATTAAGTCGTTAAATTATTCAGTTAACTAACGATCGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCACCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTCACTTTGTTTCTAATTTCTCTCTCTCTCTCTTCTTTTTGGTGAATGACCGATCGATCCCAATGTACTGAGGTTGGTTAATTTTTCTTGCTGCTGCGTTAATTTGGGCTTAATTTTGATCTTGCAGTAACTAGAAAGCGATGTAATTC]

[-] EMBL CB643752             [TGATCTTATGTTTGATAATTTGCTGCAGGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTCCCGGGGAGGTGGTGGCCGGCGGCGACGGTGCCGGTGGCGCCTCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGCCCTCATCGGGGCGCTCGGCTTCTGCCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCCCCCCGGCGAACCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGACGATCATTAATTTGATCGCTTATTAAGTCGTTAAATTATTCAGTTAACTAACGATCGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCACCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTCACTTTGTTTCTAATTTCTCTCTCTCTCTCTTCTTTTTGGTGAATGACCGATCGATCCCAATGTACTGAGGTTGGTTAATTTTTCTTGCTGCTGCGTTAATTTGGGCTTAATTTTGATCTTGCAGTAACTAGAAAGCGATGTAATTC]




>consensus_6039#2
TGATCTTATGTTTGATAATTTGCTGCAGGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGA
GAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAG
GGTCCCGGGGAGGTGGTGGCCGGCGGCGACGGTGCCGGTGGCGCCTCTGAAGCTGGTGCT
GCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGC
CGTGCTGGCCCTCATCGGGGCGCTCGGCTTCTGCCCGCTCTCCGTCTACTTCCCGGTGAG
CATGCACGTCGCCCGCCTCGGCATCCCCCCCGGCGAACCGCGGTGGTGGTCGCTGCAGGC
CATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACAT
CGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGATCGACGATCATTAA
TTTGATCGCTTATTAAGTCGTTAAATTATTCAGTTAACTAACGATCGATGATCTAGTTGT
TAGCTCAGCAACAAGCACCATCACCCATCAGGGAGCTGCCTAGCTAGAGCTGTGGCCTCA
CTTTGTTTCTAATTTCTCTCTCTCTCTCTTCTTTTTGGTGAATGACCGATCGATCCCAAT
GTACTGAGGTTGGTTAATTTTTCTTGCTGCTGCGTTAATTTGGGCTTAATTTTGATCTTG
CAGTAACTAGAAAGCGATGTAATTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6039#0      ACACTCATTCTCTAGAGAAGGGAGAGAGAAGAGTGTAGTAGTAGCTAGCTAGGAGAAAGA 60
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      GAGAGATAGAGAGAGAAACAATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTG 120
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      ATGATCATGAGAGACAAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGG 180
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      TCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGC 240
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      CCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATT 300
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      GCTACCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTC 360
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      GCTGCTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCGGTATGTCAACCTGT 420
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      GGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGG 480
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      TGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGT 540
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      ACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACA 600
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      TCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCG 660
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      GCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCG 720
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      CCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCG 780
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      CCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGC 840
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      CGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCT 900
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      ------------------------------------------------------------
                                                                                  

consensus_6039#0      TCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACA 960
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      -------------TTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTA 47
                                                                                  

consensus_6039#0      TCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCG 1020
consensus_6039#2      ------------------------------------------------------------
consensus_6039#1      CCGCTACCCCGACCCCGTCACCGGCACCGCCAACCGCGAGTACATCGACGCCGTTCGCTG 107
                                                                                  

consensus_6039#0      TCATCGTCCACCTCATCGGCGCCTACCAAGTG--TTCGCGCAGCCGATCTTCGCGAGGCT 1078
consensus_6039#2      TGATCTTATGTTTGATAATTTGCTGC-AGGTG--TTCGCGCAGCCGATCTTCGCGAGGCT 57
consensus_6039#1      CTACCTCGGGCCGAAGAACGTGATGTTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGG- 166
                        * *         *        *     ***  *  ******    **  *  * **  

consensus_6039#0      GGAGAGCTACGTGGCGTGCCAGTG-GCCGGACGCCAAGTTCAT--CAACGCGACCTACTA 1135
consensus_6039#2      GGAGAGCTACGTGGCGTGCCAGTG-GCCGGACGCCAAGTTCAT--CAACGCGACCTACTA 114
consensus_6039#1      GTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGA 226
                      * * *  *    **    ***      **   ** *   * **  *   *   *     *

consensus_6039#0      CGTGAGGGTGCCGGGGAGGTGGTGGC--CGGCGGCGACGGTGG--CGGTGGCGCCGCTGA 1191
consensus_6039#2      CGTGAGGGTCCCGGGGAGGTGGTGGC--CGGCGGCGACGGTGC--CGGTGGCGCCTCTGA 170
consensus_6039#1      ACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACA 286
                        **      ***** ***    ***  ***** *  *** *   *** *    *    *

consensus_6039#0      AGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCT 1251
consensus_6039#2      AGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCT 230
consensus_6039#1      TGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCG 346
                       * ***** *  *     **    ** *  ** **  ***     *  * * *  *  * 

consensus_6039#0      TCTTCAACGCCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACT 1311
consensus_6039#2      TCTTCAACGCCGTGCTGGCCCTCATCGGGGCGCTCGGCTTCTGCCCGCTCTCCGTCTACT 290
consensus_6039#1      CCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCC 406
                       **    * ****  * * * **  *    *  ****** **      **  * **  * 

consensus_6039#0      TCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCG--CGGTGGTG 1369
consensus_6039#2      TCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCCCCCCGGCGAACCG--CGGTGGTG 348
consensus_6039#1      TCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCG 466
                      **   *    ** *   * * *** *  ****  *  ** ****   *    *** *  *

consensus_6039#0      GTCGCTGCAGGCCATGAG-CTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCT 1428
consensus_6039#2      GTCGCTGCAGGCCATGAG-CTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCT 407
consensus_6039#1      ACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCT 526
                        * *  *   **  * * *   * ** *  * ** **  *  *  ** ** ***** **

consensus_6039#0      CCGTCCAGGACATCGTCCACAACCTCA--AGGCTGCTGCACCCTTCAAGACTGTCAACTG 1486
consensus_6039#2      CCGTCCAGGACATCGTCCACAACCTCA--AGGCTGCTGCACCCTTCAAGACTGTCAACTG 465
consensus_6039#1      TCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGG 586
                       *  * *   * *** * **  *****    * * * * ** *     *   * *  * *

consensus_6039#0      ATCGATGATCATTAATTTGATCGCTTATTAAGTGGTTAAATTATTCAGTTAATTAATGAT 1546
consensus_6039#2      ATCGACGATCATTAATTTGATCGCTTATTAAGTCGTTAAATTATTCAGTTAACTAACGAT 525
consensus_6039#1      --CGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCA--TGACCACCG-T 641
                        **  ** **  *   ***        *   *        * * **  * *  *  * *

consensus_6039#0      CGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCAGCCATCAGGGAGCTGCCTAGCT 1606
consensus_6039#2      CGATGATCTAGTTGTTAGCTCAGCAACAAGCACCATCACCCATCAGGGAGCTGCCTAGCT 585
consensus_6039#1      CTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCC-TTCGGCAACGACGCCCCCGGCA 700
                      *    * **  *  *  ***   *      * **  *   *  **  **    **  ** 

consensus_6039#0      AGAGCTGTGGCCTCATTTTGTTTCTAATTTCTTTCTCTCTGTTTTTTTTTTGGTGAATGA 1666
consensus_6039#2      AGAGCTGTGGCCTCACTTTGTTTCTAATTTCTCTCTCTCTCTCTTCTTTTTGGTGAATGA 645
consensus_6039#1      ACATCCTCA--CCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACAT 758
                      * * *      *    ** *  *   *        ***   *  *     * *  **   

consensus_6039#0      TTGATCGATC--TCAATGTACTGAGGTTGGTTAATT--TTTCTTGCTGCTG-GTTAATTT 1721
consensus_6039#2      CCGATCGATC--CCAATGTACTGAGGTTGGTTAATT--TTTCTTGCTGCTGCGTTAATTT 701
consensus_6039#1      CTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTAATTACCCATCATCGTCTCACTTC 818
                        *    ***   **    *  *  *      ** *  ** *        *  * * ** 

consensus_6039#0      GGGCTTAATTTTGATCTTGGAGTAACTAGAAAAC-ATGTAATTCATCGTGTTGAGGATGA 1780
consensus_6039#2      GGGCTTAATTTTGATCTTGCAGTAACTAGAAAGCGATGTAATTC---------------- 745
consensus_6039#1      CTCGTTAATGGCGGGCGGCGATCGACGATGATCTTATGTTTGAT---------------- 862
                          *****   *  *    *   ** *  *    ****                     

consensus_6039#0      GCAATGCAAGAAAGAAAATA 1800
consensus_6039#2      --------------------
consensus_6039#1      --------------------