cluster # 6042

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Oryza sativa
cluster # 6042 cluster # 6042 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6042#0 length = 1849 sequences # 3
consensusID : consensus_6042#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1849
fasta sequence
                              [AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTGCTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTGCAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAATCTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGACGAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGCGAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAACAGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGACGTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAACGAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCTCCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCGAAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGCGCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAGATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAGGACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCGGAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCGGCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTCGTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGGGAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCGGCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGACTTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGCTCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGACGTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGGTTCGGTGACGGCGTGGACATCGTGCA-CTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA]

[+] EMBL AK111824             [AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTGCTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTGCAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAATCTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGACGAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGCGAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAACAGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGACGTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAACGAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCTCCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCGAAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGCGCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAGATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAGGACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCGGAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCGGCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTCGTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGGGAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCGGCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGACTTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGCTCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGACGTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGGTTCGGTGACGGCGTGGACATCGTGCA CTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACCACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGT                                         ]
[+] EMBL BI809338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCGTGCACCTGGGTCCGCAA GTGACCGCCGA CTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA]
[+] EMBL CB684619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGACACTGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTT                   ]




>consensus_6042#0
AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTG
CTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTG
CAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAAT
CTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGAC
GAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGC
GAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAAC
AGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGAC
GTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAAC
GAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCT
CCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCG
AAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGC
GCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAG
ATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAG
GACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCG
GAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCG
GCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTC
GTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGG
GAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCG
GCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCAC
CGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGAC
TTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGC
TCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGAC
GTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGG
TTCGGTGACGGCGTGGACATCGTGCACTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGAC
AACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTG
GCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCC
CGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAAT
AGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAAT
GTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGG
TTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAAT
GAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA
clustalw multiple alignements is not computed in this case