These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 771 fasta sequence [CGAGGCAAGAGGGATATTCAAGAGCTTTTCAGTCTGCCTGAGCAAGGTTTTGATGTTTCGCTGACACAAAAGCAATTGCAAGAAGAGCATGGACAACAACTTGTGATGGACGACTCCTTGAGGAAGCATATACAATTCCTGGAGCAACAAGGCATAGCGGGCGTGAG-CATCACAGCCTTCTGTTTTCTAAGACAGCAATCTTACCTACACTGAATGATAATGATGGTTTGGACAGTCGTCGAGCTATGCCAATGGCCAAGCACTACTACAAGGGAGCCTCATCTGACTATGTTGCCAATGGTGCTGCCTATGCGATGAAGCCAAAAGAGTTC-ATTGCTC-GAACATACTCCCCGA-ACAGCACAAGCAC-AGAAAGTCCTGAGGAAATCAAGGCCAAAATC-AACCGG-CTTTCGC-AACCCTTG-CAAACACGGTGCTTGTGGCGAAGCTACCAGATCGTGGAGACAAGATAAGGAGGCAGATAAATGAGCTGGACGAAAAGCTGACCGTGATCGAATCTTCTCCGGAGCCATTGGAGAGGAAGGGTCCACGCGGAAGTAATCTGCTTGGATGATCTGTCTGTCTAGTGTAGGGCATGTCTGTTTCTTTTGCTTAAATTCCATGCTTGCATGCTAGTAGTCACCTAAGGCGTGACATTTTGCATGCTACTTGTACTAATTGTGACGACCCCGGAACGGAACACATGCTGATCTCGGGTCCATCTTAGGCTTGTGTCTGAGAGAAGAGAAAAAGAGAATATTTGACCCAAAAAAAAAA] [+] EMBL AA754231 [CGAGGCAAGAGGGATATTCAAGAGCTTTTCAGTCTGCCTGAGCAAGGTTTTGATGTTTCGCTGACACAAAAGCAATTGCAAGAAGAGCATGGACAACAACTTGTGATGGACGACTCCTTGAGGAAGCATATACAATTCCTGGAGCAACAAGGCATAGCGGGCGTGAG CATCACAGCCTTCTGTTTTCTAAGACAGCAATCTTACCTACACTGAATGATAATGATGGTTTGGACAGTCGTCGAGCTATGCCAATGGCCAAGCACTACTACAAGGGAGCCTCATCTGACTATGTTGCCAATGGTGCTGCCTATGCGATGAAGCCAAAAGAGTTC ATTGCTC GAACATACT CCCGA ACAGCACAAGCAC AGAAAGTCCTGAGGRAATCAAGGCCAAAATC AACCGGTCTTTCGC AACCCT ] [+] EMBL AA752878 [ gggagnccnAGAGCTNANCAGTCTGNCTGAGCAAGGTTTTGATGTTTCGCTGACACAAAAGCNATTGCAAGAAGAGCATGGACAACAACTTGTGATGGACGACTCCTTGAGGAAGCATATACAATTCCTGGAGCAACAAGGCATAGCGGGCGTGAGCCATCACAGCCTTCTGTTTTCTAAGACAGCAATCTTACCTACACTGAATGATAATGATGGTTTGGACAGTCGTCGAGCTATGCCAATGGCCAAGCACTACTACAAGGGAGCCTCATCTGACTATNTTTNNTTTGGTGCTGCCTATGCGATGAAGCCAAAAGAGTTC ATTGCTC GAACATACTCCCCGA ACAGCACAAGCAC AGAAAGTCCTGAGGAAATCAAGGCCAAAATC AACCGG CTTTCGCAAACCCTTG CAAACACGGTGCTTGTGGCGAAGCTACCAGATCGTGGAGACAAGATAAGGAGGCAGATAAATGAGCTGGACGAAAAGCTGACCGTGATCGAATCTTCTCCGGAGCCATTGGAGAGGAAGGG ] [+] EMBL BM038704 [ aaCCCAAAGAGTTCAATTGCTCGGAACATACTCCCCGACAC GCACAAGCACAAGAAAGTCCTGAGGAAATCAAGCCCAAAATCAAACCGG CTTTCGC AACCCTNGCCAAACACGGTGCTTGTGGCGAAGCTACCAGATCGTGGAGACAAGATAAGGA GCAGATAAATGAGCTGGACGAAAAGCTGACCGTGATCGAGTCTTCTCCGGA CCCTTGGAGAGGAAGGGTCCACGCGGAAGTAATCTGCTTGGATGATCTGTCTGTCTAGTGTAGGGCATGTCTGTTTCTTTTGCTTAAATTCCATGCTTGCATGCTAGTAGTCACCTAAGGCGTGACATTTTGCATGCTACTTGTACTAATTGTGACGACCCCGGAACGGAACACATGCTGATCTCGGGTCCATCTTAGGCTTGTGTCTGAGAGAAGAGAAAAAGAGAATATTTGACCCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||