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Oryza sativa
cluster # 6080 cluster # 6080       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6080#0 length = 1525 sequences # 1  
consensus_6080#1 length = 1331 sequences # 1  
consensus_6080#2 length = 592 sequences # 1  

consensusID : consensus_6080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1525
fasta sequence
                              [CTCAAAAGAAACAGGAGCCTTTGCTATTTCCTCGGCCCCGACCAACAAACAAACAAACAGCGGATGAGCGGAGAGTAGTCAAGCCGCGTCGTCGCGCGTGGTCGTCGATCGCATCGCGCTCTCTCGCGGTTGTCGTCCAAACGCGTTGAAATTAACCACCGATCGATCGAGATGGCCGTGCGTGTAAAGCCCTACGAGTGATCGCCCCGGCCGGCGCTCTCTCTTCCCTCGTCATGGGGAGGGAGGCGTCCTCGCCACCGCCCCCGCCGCCGCCGCCGGCGGTGGTGCATGGAGCCGGCTCGTCGTTGTCCGGACAGAAGAGGAAGGCCGCCATGGACGATGGCAGCGGCGAGGACGACAACGTGCCACCATGGCTGAAACTGTCTCTCGGTCCGGTGGCCTACGGGGTCGCCACGGGCGTCGTCGACGACGACTCCTCTTCTTGCGCTCCGGCAGTGACGACGTCGATCGAGGTGCGGCCGCCGGTGGCCACTGGTGTGGTCTCCGGATCGGCGGCCCAACCATCGATTGAACATGTTCCTGCCGATGATGCGGTGGTCACGCCGTCTTTTGTGGCCTCGGCAGCCGGTGTGCTGTTCACCGGCTGCGCGAGTGGTTTGATCCCCAATGGTGCAGTCTCGGTATTTCCATGCTTTAATTTTCTTGGACCTTCAATGTCATCATCAATCCTATCGCACCTCCATCAACAATTCTCCTCGACTCGACGTCAAAGCAACGCGTCCATGGCAAGATCTAGCCGCACCTGTGGCGGGGACGACGACATGGCACTTAGCAACATCGCTGCGCCGAACGTCACAAACGGTGGCGGCAACAACAACAACGACGGTAATGCTCTTCCTGATCCACCGTATCCTTGGGCTACCAATGAACCGGCCAAACACCACTCCCTCGCCGAGCTCGCTCGCCGCGACATCACCACCATCCAAGGCGACGCTCGGTGCAGGCGCTGTGATGCACGCAAGGCGCGGTGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCGGTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACACTGGGTTTGTGCACACTTGATCAGCTCAAGTATTTCTGCGCGCACACCAACCGGCATCGCACCGGTGCCAAGGATAGGGTGCTCTTCTCCACCTACGAAGAGCTATGCAACCAACTTGTTCCTGGGCTAATCACAAGACGTGACCAGTTGAGGATGCGTTAGTTATTAATTTTTTCGGTTGTTAATTTAGACTTTTCAAGATGCAACCATGCGTGCCTACGTGGTTGTTACATTAGGTTCATCTAGAGTCTCTGTCTTGGAGTCTCGTCTCTATAAGTCTGTGAGTGTTTGAGATAGTTCGCGATATATTATTTCTCTCTTTTATTTGTAAGTTGTGCAACTGGATTTGAATGTGGGTGTGTATTGTTTGTTTTAATATACTATTTATGTCCTTTCAGCTTTGAATGATAGGCGCAATT]

[+] EMBL AK063473             [CTCAAAAGAAACAGGAGCCTTTGCTATTTCCTCGGCCCCGACCAACAAACAAACAAACAGCGGATGAGCGGAGAGTAGTCAAGCCGCGTCGTCGCGCGTGGTCGTCGATCGCATCGCGCTCTCTCGCGGTTGTCGTCCAAACGCGTTGAAATTAACCACCGATCGATCGAGATGGCCGTGCGTGTAAAGCCCTACGAGTGATCGCCCCGGCCGGCGCTCTCTCTTCCCTCGTCATGGGGAGGGAGGCGTCCTCGCCACCGCCCCCGCCGCCGCCGCCGGCGGTGGTGCATGGAGCCGGCTCGTCGTTGTCCGGACAGAAGAGGAAGGCCGCCATGGACGATGGCAGCGGCGAGGACGACAACGTGCCACCATGGCTGAAACTGTCTCTCGGTCCGGTGGCCTACGGGGTCGCCACGGGCGTCGTCGACGACGACTCCTCTTCTTGCGCTCCGGCAGTGACGACGTCGATCGAGGTGCGGCCGCCGGTGGCCACTGGTGTGGTCTCCGGATCGGCGGCCCAACCATCGATTGAACATGTTCCTGCCGATGATGCGGTGGTCACGCCGTCTTTTGTGGCCTCGGCAGCCGGTGTGCTGTTCACCGGCTGCGCGAGTGGTTTGATCCCCAATGGTGCAGTCTCGGTATTTCCATGCTTTAATTTTCTTGGACCTTCAATGTCATCATCAATCCTATCGCACCTCCATCAACAATTCTCCTCGACTCGACGTCAAAGCAACGCGTCCATGGCAAGATCTAGCCGCACCTGTGGCGGGGACGACGACATGGCACTTAGCAACATCGCTGCGCCGAACGTCACAAACGGTGGCGGCAACAACAACAACGACGGTAATGCTCTTCCTGATCCACCGTATCCTTGGGCTACCAATGAACCGGCCAAACACCACTCCCTCGCCGAGCTCGCTCGCCGCGACATCACCACCATCCAAGGCGACGCTCGGTGCAGGCGCTGTGATGCACGCAAGGCGCGGTGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCGGTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACACTGGGTTTGTGCACACTTGATCAGCTCAAGTATTTCTGCGCGCACACCAACCGGCATCGCACCGGTGCCAAGGATAGGGTGCTCTTCTCCACCTACGAAGAGCTATGCAACCAACTTGTTCCTGGGCTAATCACAAGACGTGACCAGTTGAGGATGCGTTAGTTATTAATTTTTTCGGTTGTTAATTTAGACTTTTCAAGATGCAACCATGCGTGCCTACGTGGTTGTTACATTAGGTTCATCTAGAGTCTCTGTCTTGGAGTCTCGTCTCTATAAGTCTGTGAGTGTTTGAGATAGTTCGCGATATATTATTTCTCTCTTTTATTTGTAAGTTGTGCAACTGGATTTGAATGTGGGTGTGTATTGTTTGTTTTAATATACTATTTATGTCCTTTCAGCTTTGAATGATAGGCGCAATT]


>consensus_6080#0 CTCAAAAGAAACAGGAGCCTTTGCTATTTCCTCGGCCCCGACCAACAAACAAACAAACAG CGGATGAGCGGAGAGTAGTCAAGCCGCGTCGTCGCGCGTGGTCGTCGATCGCATCGCGCT CTCTCGCGGTTGTCGTCCAAACGCGTTGAAATTAACCACCGATCGATCGAGATGGCCGTG CGTGTAAAGCCCTACGAGTGATCGCCCCGGCCGGCGCTCTCTCTTCCCTCGTCATGGGGA GGGAGGCGTCCTCGCCACCGCCCCCGCCGCCGCCGCCGGCGGTGGTGCATGGAGCCGGCT CGTCGTTGTCCGGACAGAAGAGGAAGGCCGCCATGGACGATGGCAGCGGCGAGGACGACA ACGTGCCACCATGGCTGAAACTGTCTCTCGGTCCGGTGGCCTACGGGGTCGCCACGGGCG TCGTCGACGACGACTCCTCTTCTTGCGCTCCGGCAGTGACGACGTCGATCGAGGTGCGGC CGCCGGTGGCCACTGGTGTGGTCTCCGGATCGGCGGCCCAACCATCGATTGAACATGTTC CTGCCGATGATGCGGTGGTCACGCCGTCTTTTGTGGCCTCGGCAGCCGGTGTGCTGTTCA CCGGCTGCGCGAGTGGTTTGATCCCCAATGGTGCAGTCTCGGTATTTCCATGCTTTAATT TTCTTGGACCTTCAATGTCATCATCAATCCTATCGCACCTCCATCAACAATTCTCCTCGA CTCGACGTCAAAGCAACGCGTCCATGGCAAGATCTAGCCGCACCTGTGGCGGGGACGACG ACATGGCACTTAGCAACATCGCTGCGCCGAACGTCACAAACGGTGGCGGCAACAACAACA ACGACGGTAATGCTCTTCCTGATCCACCGTATCCTTGGGCTACCAATGAACCGGCCAAAC ACCACTCCCTCGCCGAGCTCGCTCGCCGCGACATCACCACCATCCAAGGCGACGCTCGGT GCAGGCGCTGTGATGCACGCAAGGCGCGGTGGATGAACCCTGTCGTGCCGAACTGTGACG ACTGCGGCCATGAGAAATGCTTGCGTCCGGTGATCGCTGCCGAGAAGGAGCGCATCAACT GGTTGTTCCTACTGCTTGGGGAGACACTGGGTTTGTGCACACTTGATCAGCTCAAGTATT TCTGCGCGCACACCAACCGGCATCGCACCGGTGCCAAGGATAGGGTGCTCTTCTCCACCT ACGAAGAGCTATGCAACCAACTTGTTCCTGGGCTAATCACAAGACGTGACCAGTTGAGGA TGCGTTAGTTATTAATTTTTTCGGTTGTTAATTTAGACTTTTCAAGATGCAACCATGCGT GCCTACGTGGTTGTTACATTAGGTTCATCTAGAGTCTCTGTCTTGGAGTCTCGTCTCTAT AAGTCTGTGAGTGTTTGAGATAGTTCGCGATATATTATTTCTCTCTTTTATTTGTAAGTT GTGCAACTGGATTTGAATGTGGGTGTGTATTGTTTGTTTTAATATACTATTTATGTCCTT TCAGCTTTGAATGATAGGCGCAATT



consensusID : consensus_6080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1331
fasta sequence
                              [AAAGGCTTACTATTTCCTCGGCAGTCGGCCCCGACCAACCAACAACCAACAAACATCGGAGAGCCGGAGAGTAGTCAAGCCAGCCGCGTCGTCGCGTGGTCGTCGATCGATCGAGTGAGGAGTGATCGGCGCCTCTCTTCTGTCGTCATGGGGAGGGAGGCGTCCTCGCCACCGTGGGCGGCGGCGACGGCGGCGAATGGAGTGGCCGGCTCATCGTCGTCCGGACAGAAGAGGAAGGCCGCCGTGGACGACGACGGCCGCGGGGAGGACGACAACTGGCTGAAACTGTCGCTTGCTCCGGTGGACTACGGGGATCCCACGGGCGACGTCGTCGACAACAACTCCTCCTCTTGCGCTCCGGCAGTGATGACGTCGACGGAGGAGCGGTCGGGGACGGCCGCCGGTGTGGCCTCCGGATCGGCGCGCGCCGGTTTGATCCCCAACGGTGCAGTCCCGATATTCCCATGCTTCAATTTCCTTGGAACTTCAACGTCATCATCAAGCCTATCGCACCTCCATCAACAATCTTCCTCGACTCGACGTCAAAGCAACGCGTCCACATCAAGCTCTAGCGGCGGCATCGGCGGTGGTGACGACGATGAGGCACCGAACGTCATGAACGGCGGCGACAAGAACGATGGTAATGCTCTTCCGGATCCACCGTATCCTTGGGCTACCAATGGAGTGGCCAAACACCACTCCCTCGTCGAGCTCGCTCGTCGCGACATCATCAACATCAATGGCGAAGCTCGGTGCAGGCGCTGCGACACTCGCAAGATGATTGTCTACAACATTGCCACCAAGTTTCGAGAGGTGTCCGACTACTTCCGCCAGAACTACCAGCATATGAATGACCGTGCGCAGGCGCGGTGGATGAATCCCGTCGTGCCGAACTGCGATAGTTGTGGCCATGAGAGATGCATGCGTCCGGTGATTGCCGCTGAGAAGGAACGTATCAACTGGTTGTTCCTACTGCTCGGAGAGACACTGGGTTTGTGCACGCTTGATCAGCTCAAGTACTTCTGTGCGCACACCAACCGGCATCGCACCGGCGCCAAGGATAGGTGCTCTTCTCAACCTACGAAGAGCTATGCAACCAACTTGCTCCTGGGCTAATCACGGGGCATGATCAGTTGGGGATGCGTTAGCTATTAATTTTTTCGGTTGTTAATTTAGACTTTAAAGATGCAACCATGCCGTGGTTGTTATATTAGGTTCATCTAGAGTCTCTATCTTTTAGTCTCGTCTCTATAAGTATTTCACGATATATTATTTCTCTATATTATTTGTAAGTTGTGCAACTGAATTTGAATTTTGAATGTAGGTGTGTA]

[+] EMBL AK064256             [AAAGGCTTACTATTTCCTCGGCAGTCGGCCCCGACCAACCAACAACCAACAAACATCGGAGAGCCGGAGAGTAGTCAAGCCAGCCGCGTCGTCGCGTGGTCGTCGATCGATCGAGTGAGGAGTGATCGGCGCCTCTCTTCTGTCGTCATGGGGAGGGAGGCGTCCTCGCCACCGTGGGCGGCGGCGACGGCGGCGAATGGAGTGGCCGGCTCATCGTCGTCCGGACAGAAGAGGAAGGCCGCCGTGGACGACGACGGCCGCGGGGAGGACGACAACTGGCTGAAACTGTCGCTTGCTCCGGTGGACTACGGGGATCCCACGGGCGACGTCGTCGACAACAACTCCTCCTCTTGCGCTCCGGCAGTGATGACGTCGACGGAGGAGCGGTCGGGGACGGCCGCCGGTGTGGCCTCCGGATCGGCGCGCGCCGGTTTGATCCCCAACGGTGCAGTCCCGATATTCCCATGCTTCAATTTCCTTGGAACTTCAACGTCATCATCAAGCCTATCGCACCTCCATCAACAATCTTCCTCGACTCGACGTCAAAGCAACGCGTCCACATCAAGCTCTAGCGGCGGCATCGGCGGTGGTGACGACGATGAGGCACCGAACGTCATGAACGGCGGCGACAAGAACGATGGTAATGCTCTTCCGGATCCACCGTATCCTTGGGCTACCAATGGAGTGGCCAAACACCACTCCCTCGTCGAGCTCGCTCGTCGCGACATCATCAACATCAATGGCGAAGCTCGGTGCAGGCGCTGCGACACTCGCAAGATGATTGTCTACAACATTGCCACCAAGTTTCGAGAGGTGTCCGACTACTTCCGCCAGAACTACCAGCATATGAATGACCGTGCGCAGGCGCGGTGGATGAATCCCGTCGTGCCGAACTGCGATAGTTGTGGCCATGAGAGATGCATGCGTCCGGTGATTGCCGCTGAGAAGGAACGTATCAACTGGTTGTTCCTACTGCTCGGAGAGACACTGGGTTTGTGCACGCTTGATCAGCTCAAGTACTTCTGTGCGCACACCAACCGGCATCGCACCGGCGCCAAGGATAGGTGCTCTTCTCAACCTACGAAGAGCTATGCAACCAACTTGCTCCTGGGCTAATCACGGGGCATGATCAGTTGGGGATGCGTTAGCTATTAATTTTTTCGGTTGTTAATTTAGACTTTAAAGATGCAACCATGCCGTGGTTGTTATATTAGGTTCATCTAGAGTCTCTATCTTTTAGTCTCGTCTCTATAAGTATTTCACGATATATTATTTCTCTATATTATTTGTAAGTTGTGCAACTGAATTTGAATTTTGAATGTAGGTGTGTA]


>consensus_6080#1 AAAGGCTTACTATTTCCTCGGCAGTCGGCCCCGACCAACCAACAACCAACAAACATCGGA GAGCCGGAGAGTAGTCAAGCCAGCCGCGTCGTCGCGTGGTCGTCGATCGATCGAGTGAGG AGTGATCGGCGCCTCTCTTCTGTCGTCATGGGGAGGGAGGCGTCCTCGCCACCGTGGGCG GCGGCGACGGCGGCGAATGGAGTGGCCGGCTCATCGTCGTCCGGACAGAAGAGGAAGGCC GCCGTGGACGACGACGGCCGCGGGGAGGACGACAACTGGCTGAAACTGTCGCTTGCTCCG GTGGACTACGGGGATCCCACGGGCGACGTCGTCGACAACAACTCCTCCTCTTGCGCTCCG GCAGTGATGACGTCGACGGAGGAGCGGTCGGGGACGGCCGCCGGTGTGGCCTCCGGATCG GCGCGCGCCGGTTTGATCCCCAACGGTGCAGTCCCGATATTCCCATGCTTCAATTTCCTT GGAACTTCAACGTCATCATCAAGCCTATCGCACCTCCATCAACAATCTTCCTCGACTCGA CGTCAAAGCAACGCGTCCACATCAAGCTCTAGCGGCGGCATCGGCGGTGGTGACGACGAT GAGGCACCGAACGTCATGAACGGCGGCGACAAGAACGATGGTAATGCTCTTCCGGATCCA CCGTATCCTTGGGCTACCAATGGAGTGGCCAAACACCACTCCCTCGTCGAGCTCGCTCGT CGCGACATCATCAACATCAATGGCGAAGCTCGGTGCAGGCGCTGCGACACTCGCAAGATG ATTGTCTACAACATTGCCACCAAGTTTCGAGAGGTGTCCGACTACTTCCGCCAGAACTAC CAGCATATGAATGACCGTGCGCAGGCGCGGTGGATGAATCCCGTCGTGCCGAACTGCGAT AGTTGTGGCCATGAGAGATGCATGCGTCCGGTGATTGCCGCTGAGAAGGAACGTATCAAC TGGTTGTTCCTACTGCTCGGAGAGACACTGGGTTTGTGCACGCTTGATCAGCTCAAGTAC TTCTGTGCGCACACCAACCGGCATCGCACCGGCGCCAAGGATAGGTGCTCTTCTCAACCT ACGAAGAGCTATGCAACCAACTTGCTCCTGGGCTAATCACGGGGCATGATCAGTTGGGGA TGCGTTAGCTATTAATTTTTTCGGTTGTTAATTTAGACTTTAAAGATGCAACCATGCCGT GGTTGTTATATTAGGTTCATCTAGAGTCTCTATCTTTTAGTCTCGTCTCTATAAGTATTT CACGATATATTATTTCTCTATATTATTTGTAAGTTGTGCAACTGAATTTGAATTTTGAAT GTAGGTGTGTA



consensusID : consensus_6080#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 592
fasta sequence
                              [GAGGGGCCCCGACTACAAACGCCAANTTCACCAACATATGCATGACCGTGCGCAGGCGCGGTGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCGGTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACATTGGGTTGGTGCCCNCTNAATCNCCNCANTTTTTCCGNCCCCCNCCCNACCNGGNTCCCCCCCGNNNCCANGNANNGGNNCNCCTCCCCCCCCNCCAAAAACNNTTNNTTNTTTTTTTTCCTNGGGCAANCCCCANANCTTACCCNTTGAAGNANCCTTNGTTNTTNATTTTTTCCGGTGNTAATTTAAAACTTTCCAAAANCCACCCTNCCTTCCCACCTTGTTGTTNCCTTANGNTCCACCNAAATNCCCGTNCTGGNATNCCCNCCCCATAAATCCGTTANTNTTTGAAAAAATTCCCCAAANATTANTTCCCCCCTTTANTTGTTAGTTGTNCCACCGGANTTGAAAGTTGGTGTGTTTTGNTTGGTTTNAANAACCATTANGNTCCCCCCCCCNTTGAAAAAAAAAAAA]

[+] EMBL AA752891             [GAGGGGCCCCGACTACAAACGCCAANTTCACCAACATATGCATGACCGTGCGCAGGCGCGGTGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCGGTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACATTGGGTTGGTGCCCNCTNAATCNCCNCANTTTTTCCGNCCCCCNCCCNACCNGGNTCCCCCCCGNNNCCANGNANNGGNNCNCCTCCCCCCCCNCCAAAAACNNTTNNTTNTTTTTTTTCCTNGGGCAANCCCCANANCTTACCCNTTGAAGNANCCTTNGTTNTTNATTTTTTCCGGTGNTAATTTAAAACTTTCCAAAANCCACCCTNCCTTCCCACCTTGTTGTTNCCTTANGNTCCACCNAAATNCCCGTNCTGGNATNCCCNCCCCATAAATCCGTTANTNTTTGAAAAAATTCCCCAAANATTANTTCCCCCCTTTANTTGTTAGTTGTNCCACCGGANTTGAAAGTTGGTGTGTTTTGNTTGGTTTNAANAACCATTANGNTCCCCCCCCCNTTGAAAAAAAAAAAA]


>consensus_6080#2 GAGGGGCCCCGACTACAAACGCCAANTTCACCAACATATGCATGACCGTGCGCAGGCGCG GTGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCC GGTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACATT GGGTTGGTGCCCNCTNAATCNCCNCANTTTTTCCGNCCCCCNCCCNACCNGGNTCCCCCC CGNNNCCANGNANNGGNNCNCCTCCCCCCCCNCCAAAAACNNTTNNTTNTTTTTTTTCCT NGGGCAANCCCCANANCTTACCCNTTGAAGNANCCTTNGTTNTTNATTTTTTCCGGTGNT AATTTAAAACTTTCCAAAANCCACCCTNCCTTCCCACCTTGTTGTTNCCTTANGNTCCAC CNAAATNCCCGTNCTGGNATNCCCNCCCCATAAATCCGTTANTNTTTGAAAAAATTCCCC AAANATTANTTCCCCCCTTTANTTGTTAGTTGTNCCACCGGANTTGAAAGTTGGTGTGTT TTGNTTGGTTTNAANAACCATTANGNTCCCCCCCCCNTTGAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6080#0      CTCAAAAGAAACAGGAGCCTTTGCTATTTCCTCGGCCCCGACCAACAAACAAACAAACAG 60
consensus_6080#1      ------------------------------------------------------------
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      CGGATGAGCGGAGAGTAGTCAAGCCGCGTCGTCGCGCGTGGTCGTCGATCGCATCGCGCT 120
consensus_6080#1      -------------------AAAGGCTTACTATTTC-CTCGGCAGTCGGCCCCGACCAACC 40
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      CTCTCGCGGTTGTCGTCCAAACGCGTTGAAATTAACCACCGATCGATCGAGATGGC-CGT 179
consensus_6080#1      AACAACCAACAAACATCGGAGAGC-CGGAGAGTAGTCA--AGCCAGCCGCGTCGTCGCGT 97
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      GCGTGTAAAGCCCTACGAGTGATCGCCCCGGCCGGCGCTCTCTCTTCCCTCGTCATGGGG 239
consensus_6080#1      GGTCGTCGATCGAT-CGAGTGA--GGAGTGATCGGCGC-CTCTCTTCTGTCGTCATGGGG 153
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      AGGGAGGCGTCCTCGCCACCGCCCCCGCCGCCGCCGCCGGCGGTGGTGCATGGAGCCGGC 299
consensus_6080#1      AGGGAGGCGTCCTCGCCACCGT---GGGCGGCGGCGACGGCGGCGAATGGAGTGGCCGGC 210
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      TCGTCGTTGTCCGGACAGAAGAGGAAGGCCGCCATGGACGATGGCAGCGGCGAGGACGAC 359
consensus_6080#1      TCATCGTCGTCCGGACAGAAGAGGAAGGCCGCCGTGGACGACGACGGCCGCGGGGAGGAC 270
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      AACGTGCCACCATGGCTGAAACTGTCTCTCGGTCCGGTGGCCTACGGGGTCGCCACGGGC 419
consensus_6080#1      GACA----AC--TGGCTGAAACTGTCGCTTGCTCCGGTGGACTACGGGGATCCCACGGGC 324
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      G---TCGTCGACGACGACTCCTCTTCTTGCGCTCCGGCAGTGACGACGTCGATCGAGGTG 476
consensus_6080#1      GACGTCGTCGACAACAACTCCTCCTCTTGCGCTCCGGCAGTGATGACGTCGACGGAGGAG 384
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      CGGCCGCCGGTGGCCACTGGTGTGGTCTCCGGATCGGCGGCCCAACCATCGATTGAACAT 536
consensus_6080#1      CGGTCGGGGACGGCCGCCGGTGTGGCCTCCGGATCGGCG--------------------- 423
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      GTTCCTGCCGATGATGCGGTGGTCACGCCGTCTTTTGTGGCCTCGGCAGCCGGTGTGCTG 596
consensus_6080#1      -----------------------CGCGCCG------------------------------ 430
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      TTCACCGGCTGCGCGAGTGGTTTGATCCCCAATGGTGCAGTCTCGGTATTTCCATGCTTT 656
consensus_6080#1      -------------------GTTTGATCCCCAACGGTGCAGTCCCGATATTCCCATGCTTC 471
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      AATTTTCTTGGACCTTCAATGTCATCATCAATCCTATCGCACCTCCATCAACAATTCTCC 716
consensus_6080#1      AATTTCCTTGGAACTTCAACGTCATCATCAAGCCTATCGCACCTCCATCAACAATCTTCC 531
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      TCGACTCGACGTCAAAGCAACGCGTCCATGGCAAGATCTAGCCGCACCTGTGGCGGGGAC 776
consensus_6080#1      TCGACTCGACGTCAAAGCAACGCGTCCACATCAAGCTCTAGCGGCGGCATCGGCGGTGGT 591
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      GACGACATGGCACTTAGCAACATCGCTGCGCCGAACGTCACAAACGGTGGCGGCAACAAC 836
consensus_6080#1      GACGACGATGAG---------------GCACCGAACGTCATGAACGGCGGCG------AC 630
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      AACAACGACGGTAATGCTCTTCCTGATCCACCGTATCCTTGGGCTACCAATGAACCGGCC 896
consensus_6080#1      AAGAACGATGGTAATGCTCTTCCGGATCCACCGTATCCTTGGGCTACCAATGGAGTGGCC 690
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      AAACACCACTCCCTCGCCGAGCTCGCTCGCCGCGACATCACCACCATCCAAGGCGACGCT 956
consensus_6080#1      AAACACCACTCCCTCGTCGAGCTCGCTCGTCGCGACATCATCAACATCAATGGCGAAGCT 750
consensus_6080#2      ------------------------------------------------------------
                                                                                  

consensus_6080#0      CGGTGCAGGCGCTGTGATGCACGCAAG--------------------------------- 983
consensus_6080#1      CGGTGCAGGCGCTGCGACACTCGCAAGATGATTGTCTACAACATTGCCACCAAGTTTCGA 810
consensus_6080#2      -----------------------------------------------------------G 1
                                                                                  

consensus_6080#0      ------------------------------------------------------GCGCGG 989
consensus_6080#1      GAGGTGTCCGACTACTTCCGCCAGAACTACCAGCATATGAATGACCGTGCGCAGGCGCGG 870
consensus_6080#2      AGGGGCCCCGACTACAAACGCCAANTTCACCAACATATGCATGACCGTGCGCAGGCGCGG 61
                                                                            ******

consensus_6080#0      TGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCG 1049
consensus_6080#1      TGGATGAATCCCGTCGTGCCGAACTGCGATAGTTGTGGCCATGAGAGATGCATGCGTCCG 930
consensus_6080#2      TGGATGAACCCTGTCGTGCCGAACTGTGACGACTGCGGCCATGAGAAATGCTTGCGTCCG 121
                      ******** ** ************** **    ** ********** **** ********

consensus_6080#0      GTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACACTG 1109
consensus_6080#1      GTGATTGCCGCTGAGAAGGAACGTATCAACTGGTTGTTCCTACTGCTCGGAGAGACACTG 990
consensus_6080#2      GTGATCGCTGCCGAGAAGGAGCGCATCAACTGGTTGTTCCTACTGCTTGGGGAGACATTG 181
                      ***** ** ** ******** ** *********************** ** ****** **

consensus_6080#0      GGTTTGTGCACACTTGATCAGCTCAAGTATTTCTGCGCGCACACCAACCGGCATCGCACC 1169
consensus_6080#1      GGTTTGTGCACGCTTGATCAGCTCAAGTACTTCTGTGCGCACACCAACCGGCATCGCACC 1050
consensus_6080#2      GGTTGGTGCCCNCTNAATCNCCNCANTTTTTCCGNCCCCCNCCCNACCNGGNTCCCCCCC 241
                      **** **** * **  ***  * **  *  * *    * * * * * * **   * * **

consensus_6080#0      GGTGCCAAGGATAGGGTGCTCTTCTCCACCTACGAAGAGCTATGCAACCAACTTGTTCCT 1229
consensus_6080#1      GGCGCCAAGGATAGG-TGCTCTTCTCAACCTACGAAGAGCTATGCAACCAACTTGCTCCT 1109
consensus_6080#2      GNNNCCANGNANNGG-NNCNCCTCCCCCCCCNCCAAAAACNNTTNNTTNTTTTTTTTCCT 300
                      *   *** * *  **   * * ** *  **  * ** * *  *         **  ****

consensus_6080#0      GGGCTAATCACAAGACGTGACCAGTTGAGGATGCGTTAGTTATTAATTTTTTCGGTTGTT 1289
consensus_6080#1      GGGCTAATCACGGGGCATGATCAGTTGGGGATGCGTTAGCTATTAATTTTTTCGGTTGTT 1169
consensus_6080#2      NGGGCAANCCCCANANCTTACCCNTTGAAGNANCCTTNGTTNTTNATTTTTTCCGGTGNT 360
                       **  ** * *      * * *  ***  *   * ** * * ** ******** * ** *

consensus_6080#0      AATTTAGACTTTTCAAGATGCAACCATGCGTGCCTACGTGGTTGTTACATTAGGTTCATC 1349
consensus_6080#1      AATTTAGACTTTA-AAGATGCAACCATGC-------CGTGGTTGTTATATTAGGTTCATC 1221
consensus_6080#2      AATTTAAAACTTTCCAAAANCCACCCTNCCTTCCCACCTTGTTGTTNCCTTANGNTCCAC 420
                      ****** *  **   * *  * *** * *       * * ******   *** * **  *

consensus_6080#0      TAGAGTCTCTGTCTTGGAGTCTCGTCTCTATAAGTCTGTGAGTGTTTGAGATAGTTCGCG 1409
consensus_6080#1      TAGAGTCTCTATCTTTTAGTCTCGTCTCTATAAGTAT-----------------TTCACG 1264
consensus_6080#2      CNAAATNCCCGTNCTGGNATNCCCNCCCCATAAATCCGTTANTNTTTGAAAAAATTCCCC 480
                         * *  *  *  *    *  *  * * **** *                   *** * 

consensus_6080#0      ATATATTATTTCTCTCTTTTATTTGTAAGTTGTGCAACTGGATTTGAATGTGGGTGTGTA 1469
consensus_6080#1      ATATATTATTTCTCTATATTATTTGTAAGTTGTGCAACTGAATTTGAATTTTGA-ATGTA 1323
consensus_6080#2      AAANATTANTTCCCCCCTTTANTTGTTAGTTGTNCCACCGGANTTGAAAGTTGGTGTGTT 540
                      * * **** *** *    *** **** ****** * ** * * *****  * *   *** 

consensus_6080#0      TTGTTTGTTTTAATATACTATTTATGTCCTTTCAGCTTTGAATGATAGGCGCAATT 1525
consensus_6080#1      G-GTGTGTA----------------------------------------------- 1331
consensus_6080#2      TTGNTTGGTTTNAANAACCATTANGNTCCCCCCCCCNTTGAAAAAAAAAAAA---- 592
                        *  **                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)