cluster # 6087

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6087 cluster # 6087 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6087#0 length = 1159 sequences # 3
consensusID : consensus_6087#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1159
fasta sequence
                              [CAACCAGACGGGAGCTTGTCGGGGAGGAGAGAGAGAGAGAGTGGTGGTGGTGGTGGTGAGATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCGGGGAAGGACAGGTCCAGCTTCGCCGTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGCGGCGGGCTGCAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCGGCGCCGCCCGCCGCGGG-AGCTGGAGGTGCTTTCCGGCCGCCGCCGACCACCATGAACTTGCTGTCGGGGCTCGACGCGCCGGCGGTGGAGGTGGAGCCAAACACGGCGGAAACAGCGGCCGACGAGCTGCCTCTCATCAAGGCCCCGGCCGATCAGCAAAGCGACGAAAGTGCAAGTGAGGCAGCTGGAGAGAAGGCTCAACAGCTGACCATCTTCTACGGTGGAAAAGTAGTCGTCTTTGAGAACTTCCCGTCCACCAAGGTCAAGGATCTCTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACCGGCACCGCGGCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCGATTGCAAGGAGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCAAATGCTCCATACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAATCTTGGCTTGGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGATATGACCTCTTAGCTTACAGTTCACTGTCAAGTGTCAAGTGATCTGTGGGGAAGAGATGCGTGGTTGGCTGGTTGCTAGTGCTAGTGTATTCCCCCGTAGCTTCAAAGCATGAATAATTACTCAATACTACTACATTACTACTAGTAAGAACTTAATCAATACTAGGAATCAAGCTGGTGGTTAATTCTGCCTGACCATTGGCATCCTGGAATATATATAAGCACACACACGGGTTGTTTGTTCTCCACATTGTTTGCTGCTGGAGCCGTATGCTCACTGCAGTTTATATCTGTCTAGCTGGTTACCCACCTCAGCCTCACCATGTTTCGGGAATAAACACTGTGTATGTGCAAATTCCTCATTTCTCGTTCGGTTTCGCCGTATAAATTACATTGTTAC]

[+] EMBL AK108738             [CAACCAGACGGGAGCTTGTCGGGGAGGAGAGAGAGAGAGAGTGGTGGTGGTGGTGGTGAGATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCGGGGAAGGACAGGTCCAGCTTCGCCGTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGCGGCGGGCTGCAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCGGCGCCGCCCGCCGCGGG AGCTGGAGGTGCTTTCCGGCCGCCGCCGACCACCATGAACTTGCTGTCGGGGCTCGACGCGCCGGCGGTGGAGGTGGAGCCAAACACGGCGGAAACAGCGGCCGACGAGCTGCCTCTCATCAAGGCCCCGGCCGATCAGCAAAGCGACGAAAGTGCAAGTGAGGCAGCTGGAGAGAAGGCTCAACAGCTGACCATCTTCTACGGTGGAAAAGTAGTCGTCTTTGAGAACTTCCCGTCCACCAAGGTCAAGGATCTCTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACCGGCACCGCGGCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCGATTGCAAGGAGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCAAATGCTCCATACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAATCTTGGCTTGGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGATATGACCTCTTAGCTTACAGTTCACTGTCAAGTGTCAAGTGATCTGTGGGGAAGAGATGCGTGGTTGGCTGGTTGCTAGTGCTAGTGTATTCCCCCGTAGCTTCAAAGCATGAATAATTACTCAATACTACTACATTACTACTAGTAAGAACTTAATCAATACTAGGAATCAAGCTGGTGGTTAATTCTGCCTGACCATTGGCATCCTGGAATATATATAAGCACACACACGGGTTGTTTGTTCTCCACATTGTTTGCTGCTGGAGCCGTATGCTCACTGCAGTTTATATCTGTCTAGCTGGTTACCCACCTCAGCCTCACCATGTTTCGGGAATAAACACTGTGTATGTGCAAATTCCTCATTTCTCGTTCGGTTTCGCCGTATAAATTACATTGTTAC]
[+] EMBL OSS12230A            [         GGGAGCTTGTCGGGGAGGAGAGAGAGAGAGAGTGGTGGTGGTGGTGGTGAGATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCTGGGAAGGACAGGTCCAGCTTCGCCGTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGCGGCGGGCTGCAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCG  GCCNCCNGCCGCGGGAAGCTGGAGGTGCTTTCCGGCCGCCG CGACCACCATGAACTTGCTGTCGGGGCTCGACGCGCCGGCGGTGGAGGTGGAGCCAAACACGGCGGAAACANCGGCCGACGAGCTTCCTCTNATCAAGG CCCGGCCGATTAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU183889             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACCGGCACCGCGGCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCGATTGCAAGGAGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCAAATGCTCCATACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAATCTTGGCTTGGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGATATGACCTCTTAGCTTACAGTTCACTGTCAAGTGTCAAGTGATCTGTGGGGAAGAGATGCGTGGTTGGCTGGTTGCTAGTGCTAGTGTATTCCCCCGTAGCTTCAAAGCATGAATAATTACTCAATACTACTACATTACTACTAGTAAGAACTTAATCAATACTAGGAATCAAGCTGGTGGTTAATTCTGCCTGACCATTGGCAT CTGGAATATATATAAGCACACACACGGGTTGGTTGTTCTCCACATTGTTTGCTGCTGGAGCCGTATGCTCACTGCAGTTTATATCTGTCT                                                                                                        ]




>consensus_6087#0
CAACCAGACGGGAGCTTGTCGGGGAGGAGAGAGAGAGAGAGTGGTGGTGGTGGTGGTGAG
ATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCGGGGAAGGACAGGTCCAGCTTCGCC
GTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGCGGCGGGCTG
CAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCGGCGCCGCCCGCCGCGGGAGCTGGA
GGTGCTTTCCGGCCGCCGCCGACCACCATGAACTTGCTGTCGGGGCTCGACGCGCCGGCG
GTGGAGGTGGAGCCAAACACGGCGGAAACAGCGGCCGACGAGCTGCCTCTCATCAAGGCC
CCGGCCGATCAGCAAAGCGACGAAAGTGCAAGTGAGGCAGCTGGAGAGAAGGCTCAACAG
CTGACCATCTTCTACGGTGGAAAAGTAGTCGTCTTTGAGAACTTCCCGTCCACCAAGGTC
AAGGATCTCTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACCGGCACCGCG
GCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCGATTGCAAGG
AGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCAAATGCTCCA
TACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAATCTTGGCTT
GGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGATATGACCTCTTAGCTTACAGT
TCACTGTCAAGTGTCAAGTGATCTGTGGGGAAGAGATGCGTGGTTGGCTGGTTGCTAGTG
CTAGTGTATTCCCCCGTAGCTTCAAAGCATGAATAATTACTCAATACTACTACATTACTA
CTAGTAAGAACTTAATCAATACTAGGAATCAAGCTGGTGGTTAATTCTGCCTGACCATTG
GCATCCTGGAATATATATAAGCACACACACGGGTTGTTTGTTCTCCACATTGTTTGCTGC
TGGAGCCGTATGCTCACTGCAGTTTATATCTGTCTAGCTGGTTACCCACCTCAGCCTCAC
CATGTTTCGGGAATAAACACTGTGTATGTGCAAATTCCTCATTTCTCGTTCGGTTTCGCC
GTATAAATTACATTGTTAC
clustalw multiple alignements is not computed in this case