These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6105#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4921 fasta sequence [GAGCTGCTGCTCCCGCTGAACCCTCGCGCCGCCGCGGCTCCCCGCTTCATGCTAGACGGGTACCTCCTCCGCCACTCGGCTCACTTCCTCCTCCTCTCCGCTCGGCTCCGCCCTCCTCCTCCTCCTCCCCGCTGCTGCCACCGCCGCCGCCGAGTAGCCGCCCGCTGCTGCTGCTGCGGCGGCGGCGGCTCCGTTGCTGGGCACGTCTCTTGGCGACTGGATCCGCCGCGGGTGTGCCGCTGCAGCGGGCACGGCGCTGGGAGGTCGTCGGATCTTGGAGCGTTTTACCGGCGGCGACTTGAGTGCCGCTGCGGCGGCGGTGGTGGGAGGTTGGATCTCGGGGCGGGCTGCGGGCCGCGGCGGGATGCGCCGAGGCTGGTGGGGAGGGCGGTGAGGCAGGAGGTGTGGGAGTACGAGGGTGGCGAGTGGCCGCACACGAGCTGTTCGATGGAATGCCACACGGACTGGGGCGATGAAGAGGAAGACTGCGGAATTGCTCAGTGGGAGGCGCCGCCGAGGTTTCGTTTAAGTAGAAGGAGAAGTGAAGAGGATGAGGGTGACAGATGTAGGGATTGTCATCGGAGGAAGGATGCGGAGAGCGATTACTATGATGAAGACGAGTACAGTGGCCGGCAAAGGGAGAGGAGGAATATGAATGAAAGACATGGTAGGTTTACAGATTCTAACCAGAGGAGAAGGGACCAGAGGGACTACCATGATGACGATGATTATCTTGAATTCAGGCGATGGAAGGAGAGGAGGGAAAGGAGAGACTCTGAATTTGATGATGCTGTTGCAAGGAGAGGAATTGAAGATAGAAGATACAGCGAGGATGACAGGAAATACGATCGGAGAAGAGAAAGGAAGGATTTTGGATATGAGGGTGCAGTTGATGTCAGGAGAGGAGCTAGTAGGTACACTGATAATAACCAAAGATCTGATTGGAGAACAGAGGATAGGGATTATGAAGTTGACGTGAGGAGAGAAGGAAAGCACCGTAGAAATGATGATCAAAGATATGTTACACGACACCAGCAGAGAACTGATGGTACAGAGGAAGATGTTTCACTATTGGAGTCGTATCGTTGGCATGATGAAGAATATGATTACGATGATCGAGACATTGCTGAGAGGAGGTACTACTCCGGGAGAACCCAGAAATCTGCAAGAGCATCTGCATTGCATGAGGATGAATCTAACAGGGCTTCGAGCTCAAGGAACATAGTTGATACAAGGGTTGCAAGAAACAAGGAGAATTCAGCCTCAAGGGTCCGGTGGCATGATAATGTAGACAAACGAGCTGAGCAGACATCTGAAGAGAGAAACCAACGATATTCTTCCTCGGTGGTTCAATCTTTTGATGAGAAGAAACATGACCATGACGATGCACAGCTTATCAGTGTAAGGGATTCTAGGATAGGAACACGAGATGTCAGGGTTATAACTGAGGATGATGCAAATTTGGCCTCTAGTTCAAAGAACACTATGATTTCAAAGCACCACAACACTGTAGATCAGAAATCAACAACACGGAAGGATGACTCAAGGAATAGATCACAGAAAATAATGGAGCTGTCAGAAGTCAGAGGTACCAACACTGAACATGACTCAAGAACACAAAGTTATCACCAGGAAGATAGAAGAAGGTACATTGAAAATAGGGCATCTTCTCTTCAAAGTTCTGTAAAGACGACTAGTGACACTAGAACACAAGTTGATCAGCATGATGAAGTGGATCAGCAGGTGGTTGCACTAACTGACTCAAGGAGAAGGTCTGAAAAACTCACAGATATAAAAATGGATAGTACTTCTAATGTTAGCAGGACCTCTCTCAAACAGAGAAATTCTGATGAAGTGAATCAGATGGATATTGATGACAGATCTAATTCCGTTCACAATATAACTCATATTACAAGAGACAAAAAGAGATATGTAAACCAGCAGGTAATACATGAAACGGACATAGATGTGCAGAATGTCACGCATGTTGATGTTTCCAAAGTTCGTGCGAGTGATATTTCTGTCTCAAGGAATTCACAAAAGGCTTCTGAAACTAGATCTGATATGGCAAATAGCCAGTTAGAACAGATCCATGCTAGTAATAGTTCCATGGTTAGGGGTCCACAAAGTTATCTGGAGGCTGCACTGCACAACCGGGTATACTCGACTTCAGCTACCGATATTGTTAACACGACAGCGGAGAAGCATGGACAAGTCGAAGCTAGTACCAACAATGCTGCTATAGCAAGTACTTCTGAAAGTCATATCCAAGCAAGAATAGAAGATTCAGCTGTAAATACTATTGGCAGTGTGCAAGAGCAGATTGATCTTACTAGAATCTGTGCTAGTGACTCCACAGTTGTTAGCAGTTCCCATGGTCTTGATACTAGAAGCGGTCAAGTTAGCAGAACTTCAGCTACAAATCTTGTTGACAGGACAAGGGAGACCCGAGATAAGAGCGATCAGCAAATTACACAAGCTTCAAATATAGGCAGAAATGACCACGTAACATCCAAATTTTATGAATCCTCTCAGGACTCTAGACAAAGTCTAGCAAGATTGAAAGATGCTGGGAGATTGATGGAACACAACGTGGGTTTGGACTGGCAGCAGGAAGAGTCAAGAAGAGTTTCTAATGACATGGATATTGCTACTTTGGAAATGCAGAGCACTGAAGACGGATCATCTATGGTTCCTGTTGACGAGGAGAAAAGACCAATGATAACTGGAAGCAGTGAACAAGAAGTAAGGAGTGAAACTACTGCTGGAAGCAGTATACCAAGTGGTTCAAGTGCAAGACAGCCTGTGAATGAAAGCTTGTTAGAATCAGCTGCTCGATTAGAGAAATCATCTACATTTCATGTCGGGCAATTTGTTGGTGAGGTCCGCAAAGGAGTGTCAGATGCGGATACTACTTTAACAAGGAAAAATGATAAGTCCATAATGGAAGGTATAGCAAGATCTTCATCTAGATCTAGAATGGGGGGACCATCAGATGAGATGTGGGATGTCCAAAGTGCTACTTCTCAAGAGACCTTTAAGACGGCTGATAAGGAGGAAGGCTCATCAGTTGATGGAGGTACTACTTCGACTTCTCTGACACCCAAGAATGAAACTGCTCTTGCTAGAAAAGTTCACAAATCACTCTGGGCCTATGTTGCAGATATAGTCCGTCTTGGTTGGATTCAACGTGGTGAATCTCTTGATTCTAACAGCAATAGATCAGTTAAGAAAAGTTCATCAAGTAATTCTCAGAATACTGAAGGCTGGATTTCTAGCCAGGAACGCGATAATGAAGGCATACAGAAGAAAACTGAAAGTTCTAAACCAAAAGATCATCTGATGAAGTCACACACTGGAGAATCACTAAAGAAAGAAAGCTTGCCTACTGGTTCACAAGATCTCCTAATATCAGAATCTGGTAACGTACCTCAGATAAATACATCTAAAGGAGATTTTATATCCAGAACTTCTAAAGAAGACGCACACATGACAGGAGAAAAAGCAAAACAATCGAAAGTCGCTGCATCACCAAAACAAAATACTGTTGGAGGCTTTTCTGAGGACAGCACGCCAACATTGGTTGACGTTGCAAAAAAACATTTTCCTGAACATGAAGCTTCTACTTCATCCATGATCACGACAAAGGGTTTTGCTGACAATGACACTGGTGAAGGAGTGATCGCTGGCACCTCTTCAATGCCCATCAGCACAGAGGGAGTTGGTTGGACTGCTGGTTCAGATGAGTGGAGATACGATCCTTCAGGTGCTATGACCCCTTACCGTCATCCTCATACCCAGGTAATGATGCCTCATG-AGGATACCCCAGCAATCCTAGAATCAGCAGAGTTGCCTACGGTTGGTTCCACGAGGTTTGAAGAGAAGATTGTTGTACAAGAGACTCCTGAAGTTATCAGAACTGATGGGAAAGATGCTGAATTGAAGAGGAGAAAGTTTCAGAGAAATAAGCAGGTAATGAAGGAAACATTTGATGAATGGGAGGAAGCATACCAGCGAGATGCTGAACAGAGAAAAACTGATGAGTTATTCATGAGGGAAGCATTGCATGAAGCTCAGAGGGCTGCAGATTTGTGGGAGGTGCCAGTTGGAGCAGTGCTAGTACAGAATGGAGAAATTATTGCTCGTGGTTGTAATTTAGTTGAAGATCTCAGGGATTCAACTGCACATGCTGAAATTGTTTGCATTAGAGAAGCTTCTAACAAACTTAAGACATGGCGCCTGGCGGATACAACATTGTATGTAACCCTGGAGCCTTGTGCCATGTGCGCTGGTGCTATTCTTCAAGCTAGAGTTGATACGGTGGTATGGGGAGCCCCAAACAAGCTTCTTGGAGCTGATGGCAGCTGGGTTAGGCTTTTCCCCGGTGATGGTCAAACAAGCAGTTTGGATTCAGCAAACACAAACCAGGGGGCTGGACCTGTCCACCCTTTCCATCCGAAGATATCCATAAGGCGCGG-CATTCTCTCCGCTGAGTGCTCAGAAATAATGCAGCAATTCTTCCATTT---GAGGAGGAAGAAACAGAAGCCGGAGTCGCCACCTCATGCGCACCCCCAAGGGCGCAACCATCCAGTCAAGTTCTTCAGTAAGATGCATCACATGTTTGGCACA-ATCTTCTGTTTGTAGTAACA-TTTCCTTCTATTTTTCTCTG-CTGTGAGTTACA-TTTCTTCCGTTGATTCAGTCCCCTTTCTTGTGTATTTCCCTATGTGTATGCCCCCCTTTTCTCCCCTGCTTTGGGTTATTCTGTAATGTTAGATTGGAGGTAATTTGAG-CCGAGGGAAACTGCCATCAGTTTTCGCCGCCTTTCATGTGGTTGGTTGGTTA-GCCGTAGTGGTAACTGCCA-TTCCA-CTCTGTAAGCACC--ATTCTGTAGTGGTTGTTTTCCA-CCCTCTTTTTTTTTTCTTTC] [+] EMBL AK120595 [GAGCTGCTGCTCCCGCTGAACCCTCGCGCCGCCGCGGCTCCCCGCTTCATGCTAGACGGGTACCTCCTCCGCCACTCGGCTCACTTCCTCCTCCTCTCCGCTCGGCTCCGCCCTCCTCCTCCTCCTCCCCGCTGCTGCCACCGCCGCCGCCGAGTAGCCGCCCGCTGCTGCTGCTGCGGCGGCGGCGGCTCCGTTGCTGGGCACGTCTCTTGGCGACTGGATCCGCCGCGGGTGTGCCGCTGCAGCGGGCACGGCGCTGGGAGGTCGTCGGATCTTGGAGCGTTTTACCGGCGGCGACTTGAGTGCCGCTGCGGCGGCGGTGGTGGGAGGTTGGATCTCGGGGCGGGCTGCGGGCCGCGGCGGGATGCGCCGAGGCTGGTGGGGAGGGCGGTGAGGCAGGAGGTGTGGGAGTACGAGGGTGGCGAGTGGCCGCACACGAGCTGTTCGATGGAATGCCACACGGACTGGGGCGATGAAGAGGAAGACTGCGGAATTGCTCAGTGGGAGGCGCCGCCGAGGTTTCGTTTAAGTAGAAGGAGAAGTGAAGAGGATGAGGGTGACAGATGTAGGGATTGTCATCGGAGGAAGGATGCGGAGAGCGATTACTATGATGAAGACGAGTACAGTGGCCGGCAAAGGGAGAGGAGGAATATGAATGAAAGACATGGTAGGTTTACAGATTCTAACCAGAGGAGAAGGGACCAGAGGGACTACCATGATGACGATGATTATCTTGAATTCAGGCGATGGAAGGAGAGGAGGGAAAGGAGAGACTCTGAATTTGATGATGCTGTTGCAAGGAGAGGAATTGAAGATAGAAGATACAGCGAGGATGACAGGAAATACGATCGGAGAAGAGAAAGGAAGGATTTTGGATATGAGGGTGCAGTTGATGTCAGGAGAGGAGCTAGTAGGTACACTGATAATAACCAAAGATCTGATTGGAGAACAGAGGATAGGGATTATGAAGTTGACGTGAGGAGAGAAGGAAAGCACCGTAGAAATGATGATCAAAGATATGTTACACGACACCAGCAGAGAACTGATGGTACAGAGGAAGATGTTTCACTATTGGAGTCGTATCGTTGGCATGATGAAGAATATGATTACGATGATCGAGACATTGCTGAGAGGAGGTACTACTCCGGGAGAACCCAGAAATCTGCAAGAGCATCTGCATTGCATGAGGATGAATCTAACAGGGCTTCGAGCTCAAGGAACATAGTTGATACAAGGGTTGCAAGAAACAAGGAGAATTCAGCCTCAAGGGTCCGGTGGCATGATAATGTAGACAAACGAGCTGAGCAGACATCTGAAGAGAGAAACCAACGATATTCTTCCTCGGTGGTTCAATCTTTTGATGAGAAGAAACATGACCATGACGATGCACAGCTTATCAGTGTAAGGGATTCTAGGATAGGAACACGAGATGTCAGGGTTATAACTGAGGATGATGCAAATTTGGCCTCTAGTTCAAAGAACACTATGATTTCAAAGCACCACAACACTGTAGATCAGAAATCAACAACACGGAAGGATGACTCAAGGAATAGATCACAGAAAATAATGGAGCTGTCAGAAGTCAGAGGTACCAACACTGAACATGACTCAAGAACACAAAGTTATCACCAGGAAGATAGAAGAAGGTACATTGAAAATAGGGCATCTTCTCTTCAAAGTTCTGTAAAGACGACTAGTGACACTAGAACACAAGTTGATCAGCATGATGAAGTGGATCAGCAGGTGGTTGCACTAACTGACTCAAGGAGAAGGTCTGAAAAACTCACAGATATAAAAATGGATAGTACTTCTAATGTTAGCAGGACCTCTCTCAAACAGAGAAATTCTGATGAAGTGAATCAGATGGATATTGATGACAGATCTAATTCCGTTCACAATATAACTCATATTACAAGAGACAAAAAGAGATATGTAAACCAGCAGGTAATACATGAAACGGACATAGATGTGCAGAATGTCACGCATGTTGATGTTTCCAAAGTTCGTGCGAGTGATATTTCTGTCTCAAGGAATTCACAAAAGGCTTCTGAAACTAGATCTGATATGGCAAATAGCCAGTTAGAACAGATCCATGCTAGTAATAGTTCCATGGTTAGGGGTCCACAAAGTTATCTGGAGGCTGCACTGCACAACCGGGTATACTCGACTTCAGCTACCGATATTGTTAACACGACAGCGGAGAAGCATGGACAAGTCGAAGCTAGTACCAACAATGCTGCTATAGCAAGTACTTCTGAAAGTCATATCCAAGCAAGAATAGAAGATTCAGCTGTAAATACTATTGGCAGTGTGCAAGAGCAGATTGATCTTACTAGAATCTGTGCTAGTGACTCCACAGTTGTTAGCAGTTCCCATGGTCTTGATACTAGAAGCGGTCAAGTTAGCAGAACTTCAGCTACAAATCTTGTTGACAGGACAAGGGAGACCCGAGATAAGAGCGATCAGCAAATTACACAAGCTTCAAATATAGGCAGAAATGACCACGTAACATCCAAATTTTATGAATCCTCTCAGGACTCTAGACAAAGTCTAGCAAGATTGAAAGATGCTGGGAGATTGATGGAACACAACGTGGGTTTGGACTGGCAGCAGGAAGAGTCAAGAAGAGTTTCTAATGACATGGATATTGCTACTTTGGAAATGCAGAGCACTGAAGACGGATCATCTATGGTTCCTGTTGACGAGGAGAAAAGACCAATGATAACTGGAAGCAGTGAACAAGAAGTAAGGAGTGAAACTACTGCTGGAAGCAGTATACCAAGTGGTTCAAGTGCAAGACAGCCTGTGAATGAAAGCTTGTTAGAATCAGCTGCTCGATTAGAGAAATCATCTACATTTCATGTCGGGCAATTTGTTGGTGAGGTCCGCAAAGGAGTGTCAGATGCGGATACTACTTTAACAAGGAAAAATGATAAGTCCATAATGGAAGGTATAGCAAGATCTTCATCTAGATCTAGAATGGGGGGACCATCAGATGAGATGTGGGATGTCCAAAGTGCTACTTCTCAAGAGACCTTTAAGACGGCTGATAAGGAGGAAGGCTCATCAGTTGATGGAGGTACTACTTCGACTTCTCTGACACCCAAGAATGAAACTGCTCTTGCTAGAAAAGTTCACAAATCACTCTGGGCCTATGTTGCAGATATAGTCCGTCTTGGTTGGATTCAACGTGGTGAATCTCTTGATTCTAACAGCAATAGATCAGTTAAGAAAAGTTCATCAAGTAATTCTCAGAATACTGAAGGCTGGATTTCTAGCCAGGAACGCGATAATGAAGGCATACAGAAGAAAACTGAAAGTTCTAAACCAAAAGATCATCTGATGAAGTCACACACTGGAGAATCACTAAAGAAAGAAAGCTTGCCTACTGGTTCACAAGATCTCCTAATATCAGAATCTGGTAACGTACCTCAGATAAATACATCTAAAGGAGATTTTATATCCAGAACTTCTAAAGAAGACGCACACATGACAGGAGAAAAAGCAAAACAATCGAAAGTCGCTGCATCACCAAAACAAAATACTGTTGGAGGCTTTTCTGAGGACAGCACGCCAACATTGGTTGACGTTGCAAAAAAACATTTTCCTGAACATGAAGCTTCTACTTCATCCATGATCACGACAAAGGGTTTTGCTGACAATGACACTGGTGAAGGAGTGATCGCTGGCACCTCTTCAATGCCCATCAGCACAGAGGGAGTTGGTTGGACTGCTGGTTCAGATGAGTGGAGATACGATCCTTCAGGTGCTATGACCCCTTACCGTCATCCTCATACCCAGGTAATGATGCCTCATG AGGATACCCCAGCAATCCTAGAATCAGCAGAGTTGCCTACGGTTGGTTCCACGAGGTTTGAAGAGAAGATTGTTGTACAAGAGACTCCTGAAGTTATCAGAACTGATGGGAAAGATGCTGAATTGAAGAGGAGAAAGTTTCAGAGAAATAAGCAGGTAATGAAGGAAACATTTGATGAATGGGAGGAAGCATACCAGCGAGATGCTGAACAGAGAAAAACTGATGAGTTATTCATGAGGGAAGCATTGCATGAAGCTCAGAGGGCTGCAGATTTGTGGGAGGTGCCAGTTGGAGCAGTGCTAGTACAGAATGGAGAAATTATTGCTCGTGGTTGTAATTTAGTTGAAGATCTCAGGGATTCAACTGCACATGCTGAAATTGTTTGCATTAGAGAAGCTTCTAACAAACTTAAGACATGGCGCCTGGCGGATACAACATTGTATGTAACCCTGGAGCCTTGTGCCATGTGCGCTGGTGCTATTCTTCAAGCTAGAGTTGATACGGTGGTATGGGGAGCCCCAAACAAGCTTCTTGGAGCTGATGGCAGCTGGGTTAGGCTTTTCCCCGGTGATGGTCAAACAAGCAGTTTGGATTCAGCAAACACAAACCAGGGGGCTGGACCTGTCCACCCTTTCCATCCGAAGATATCCATAAGGCGCGG CATTCTCTCCGCTGAGTGCTCAGAAATAATGCAGCAATTCTTCCATTT GAGGAGGAAGAAACAGAAGCCGGAGTCGCCACCTCATGCGCACCCCCAAGGGCGCAACCATCCAGTCAAGTTCTTCAGTAAGATGCATCACATGTTTGGCACA ATCTTCTGTTTGTAGTAACA TTTCCTTCTATTTTTCTCTG CTCGGAGTTACA TTTCTTCCGTTGATTCAGTCCCCTTTCTTGTGTATTTCCCTATGTGTATGCCCCCCTTTTCTCCCCTGCTTTGGGTTATTCTGTAATGTTAGATTGGAGGTAATTTGAG CCGA GGAAACTACC ] [+] EMBL D43542 [ AAAGTCGCTGCATCACCAAAACAAAATACTGTTGGAGGCTTTTCTGAGGACAGCACGCCAACATTGGTTGACGTTGCAAAAAAACATTTTCCTGAACATGAAGCTTCTACTTCATCCATGATCACGACAAAGGGTTTTNCTGACAATGACACTGGTGAAGGAGTGATCGCTGGCACCTCTTCAATGCCCATCAGCACAGAGGGAGTTGGTTGGACTGCTGGTTCAGATGAGTGGAGATACGATCCTTCAGGTGCTATGNCCCCTTACCGTCATCCTCATACCCAGGTAATGATGCCTCATGNGGGNTACCCCAGCAATCCTAGGATCAGCAGNNTTGCCTACGGg ] [+] EMBL BM038885 [ GGCGCGGCCATTCTCTCC CTGAGTGCTCAGAAATAAATC NCGATTCTTCCATTTGAGGAGGAGGAAGAAACAGAA CCGGA TC CCACCTCATGCGCACCCCCAAGGGC CAACCATCCAGTCAAGTTCTTCAGTAAGATGCATCACATGTTTGGCACA ATCTTCTGTTTGTAGTAACA TTTCCTTCTATTTTTCTCTG CTGTGAGTTACA TTTCTTCCGTTGATTCAGTCCCCTTTCTTGTGTATTTCCCTATGTGTATGCCCCCCTTTTCTCCCCTGCTTTGGGTTATTCTGTAATGTTAGATTGGAGGTAATTTGAG CCGAGGGAAACTGCCATCAGTTTTCGCCGCCTTTCATGTGGTTGGTTGGTTA GCCGTAGTGGTAACTGCCA TTCCA CTCTGTAAGCACC ATTCTGTAGTGGTTGTTTTCCA CCCTCTTTTTTTTTTCTTTC] [+] EMBL BQ908852 [ AGTTCTTCAGTAAGATGCATCACATGTTTGGCACACATCTTCTGTTTGTAGTAACACTTTCCTTCTATTTTTCTCTGNCTGTGAGTTACACTTTCTTCCGTTGATTCAGTCCCCTTTCTTGTGTATTTCCCTATGTGTATGCCCCCCTTTTCTCCCCTGCTTTGGGTTATTCTGTAATGTTAGATTGGAGGTAATTTGAGCCCGAGGGAAACTGCCATCAGTTTTCGCCGCCTTTCATGTGGTTGGTTGGTTAGGCCGTAGTGGTAACTGGCACTTCCACCTCTGTAAGCACCCAATTCTGTAGTGGTTGTTTTCCACCCCTCTTTTTTTTTTCTTTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||