These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6106#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1547 fasta sequence [CAAACCAAGCAAACTCCATCTCATCGTCGCTCCGGTCCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT-AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAGTCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAAC-AGTAGCAGGAAGTCAAGTCAAACTACCCACTGAAAATGTAGATAT] [+] EMBL AK120652 [CAAACCAAGCAAACTCCATCTCATCGTCGCTCCGGTCCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAGTCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAAC AGTAGCAGGAAGTCAAGTCAAA ] [+] EMBL CB642840 [ TCGCCCCTGACCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCAGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCAGCGAGTGCTGGTCCGGCGAGAAGACCAGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCAGCTGCAGGATTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCgcat ] [-] EMBL CB642841 [ GGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTTTAAAGGGAAAATCACGAGTCCCT ] [+] EMBL AA753210 [ TCTACATAAAANCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGACCCTCTNNCCTTGACATTGTTACACTGCAAATGGGAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTCTGTCATAATTGCAATCGTGCCCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAATCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAACAAGTANCAGGAAATCAAGTCAAACTACCCACTGAAAATGTAGATAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||