cluster # 6112

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Oryza sativa
cluster # 6112 cluster # 6112 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6112#0 length = 1036 sequences # 4
consensusID : consensus_6112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1036
fasta sequence
                              [CGGCAAGCTATCTCGTGCTTTTCCAGGGTATTAGGTTTGGGGGGGAGGAGAGTAAGTAGGATAACCAGGTTGTGCATGACTGCATTAGCTTGCCTCGCCGGGAAAGCAATTTCTTGGAGCAGTGGTGTCAAAGCAGCGGCTGGGTGTGGTCTCGGCTTGCTTCCGCAGTGGCGCGGCGTGTTCCGGAGCGTGAGAATGGAGAGTGGGAGCTCTCAGGGTGGCCGTGGTGCCCTCATAGTCCTGGAAGGGCTGGATAGGAGTGGGAAATCTTCGCAGTGTGCTCGGCTGCTGTCCTTTCTGCAAGGTAAAGGTTGCCAGGCCGAAGGGTNGGCGGTTTCCTGATAGAGGTACTAGTGTTGGGCAGATGATATCCGCGTACCTTGCGAACGAGTC-GAACTTGACGATAGGACAATCCATTTGCTCTTCAGTGCGAATCGCTGGGAGAAAAGAGCTTTGATGGAAAGAAAGCTACTTGGTGGAACTACTCTCATTGTTGATCGTTATTCTTATTCTGGAGTGGCATTTTCAGCTGCCAAGGGACTTGACATTGAGTGGTGCAAGGCTCCTGAAAATGGACTTATAGCCCCAGATCTTGTAGTATATTTGGATGTACAACCAGAGAAAGCAGCTGAAAGAGGAGGCTATGGGGGTGAGAGATATGAAAAAATTGAATTCCAAAAGAAAGTTGGTGAGCATTACCATTCACTTCGTGATTCAACATGGAAGGTTGTTGATGGCTCCCTTCCCATGGAAGTTGTGGAAGAACAGCTGAAGGAACTAGCCATGAGTTGCATTCTGGAATGCCAAAGCAAGCAAC-TTGCCAGTCTGGCCTGGTAGTGTATCGATAGCACCATCCCTTGGTGCCAATGCCACATCATTATCGATGGCCTGCTAGAGTTATGCTTTAAGGAGAGCTTGCTGATTTCTGTA-TTCTATGTGCACTTCTATAGAGTGATGTTTTGCGAGAACTTGTTCGC-TGATGTTCTGATAGCCTTTTCGTAATGTGAATTATGTGAGGTTCTGCTGTTCTAAAAAA]

[+] EMBL CF308311             [CGGCAAGCTATCTCGTGCTTTTCCAGGGTATTAGGTTTGGGGGGGAGGAGAGTAAGTAGGATAACCAGGTTGTGCATGACTGCATTAGCTTGCCTCGCCGGGAAAGCAATTTCTTGGAGCAGTGGTGTCAAAGCAGCGGCTGGGTGTGGTCTCGGCTTGCTTCCGCAGTGGCGCGGCGTGTTCCGGAGCGTGAGAATGGAGAGTGGGAGCTCTCAGGGTGGCCGTGGTGCCCTCATAGTCCTGGAAGGGCTGGATAGGAGTGGGAAATCTTCGCAGTGTGCTCGGCTGCTGTCCTTTCTGCAAGGTAAAGGTTGCCAGGCCGAAGGGTNGGCGGTTTCCTGATAGAGGTACTAGTGTTGGGCAGATGATATCCGCGTACCTTGCGAACGAGTCGGAACTTGACGATAGGACAATCCATTTGCTCTTCAGTGCGAATCGCTGGGAGAAAAGAGCTNTGATGGAAAGAAAGCTACTTGGTGGAACTACTCTCATTGTTGATCGTTATTCTTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB096648             [                                                                                                                                                                                                                                                                                                                                                                aaggggGGGCAGATGATATCCGCGTACCTTGCGAACGAGTC GAACTTGACGATAGGACAATCCATTTGCTCTTCAGTGCGAATCGCTGGGAGAAAAGAGCTTTGATGGAAAGAAAGCTACTTGGTGGAACTACTCTCATTGTTGATCGTTATTCTTATTCTGGAGTGGCATTTTCAGCTGCCAAGGGGCTTGACATTGAGTGGTGCAAGGCTCCTGAAAATGGACTTATAGCCCCAGATCTTGTAGTATATTTGGATGCACAACCAGAGAAAGCAGCTGAAAGAGGAGGCTATGGGGGTGAGAGATATGAAAAAATTGAATTCCAAAAGAAAGTTGGTGAGCATTACCATTCACTTCGTGATTCAACATGGAAGGTTGTTGATGGCTCCCTTCCCATGGAAGTTGTGGAAGAACAGCTGAAGGAACTAGCCATGAGTTGCATTCTGGAATGCCAAAGCAAGCAAC TTGCCAGTCTGGCCTGGTAGTGTATCGATAGCACCATCCCTTGGTGCCAATGCCACATCATTATCGATGGCCTGCTAGAGTTATGCTTTAAGGAGAGCTTGCTGATTTCTGTA TTCTATGTGCACTTCTATAGAGTGATGNTTTGCGAGAACTTGNTCGC TGATGNTCTGATAGCCTTTTCGTAATGNGAATTATGTGAGGn                 ]
[+] EMBL CA765646             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGGAGAAAAGAGCTTTGATGGAAAGAAAGCTACTTGGTGGAACTACTCTCATTGTTGATCGTTATTCTTATTCTGGAGTGGCATTTTCAGCTGCCAAGGGACTTGACATTGAGTGGTGCAAGGCTCCTGAAAATGGACTTATAGCCCCAGATCTTGTAGTATATTTGGATGTACAACCAGAGAAAGCAGCTGAAAGAGGAGGCTATGGGGGTGAGAGATATGAAAAAATTGAATTCCAAAAGAAAGTTGGTGAGCATTACCATTCACTTCGTGATTCAACATGGAAGGTTGTTGATGGCTCCCTT CTATGGAAGTTGTGGAAGAACAGCTGAAGGAACTAGCCATGAGTTGCATTCTGGAATGCCAAAGCAAGCAACTTTGCCAGTCTGGCCTGGTAGTGTATCGATAGCACCATCCCTTGGTGCCAATGCCACATCATTATCGATGGCCTGCTAGAGTTATGCTTTAAGGAGAGCTTGCTGATTTCTGTATTTCTACGTGCACTTCTATAGAGTGATGTTTTGCGAGAACTTGTTCGCTTGATGTTCTGATAGCCTTTTCGTAATGTGAATTTGGNGAGGTTCTG             ]
[-] EMBL CF308312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGAAAGAAAGCTACTTGGTGGAACTACTCTCATTGTTGATCGTTATTCTTATTCTGGAGTGGCATTTTCAGCTGCCAAGGGACTTGACATTGAGTGGTGCAAGGCTCCTGAAAATGGACTTATAGCCCCAGATCTTGTAGTATATTTGGATGTACAACCAGAGAAAGCAGCTGAAAGAGGAGGCTATGGGGGTGAGAGATATGAAAAAATTGAATTCCAAAAGAAAGTTGGTGAGCATTACCATTCACTTCGTGATTCAACATGGAAGGTTGTTGATGGCTCCCTTCCCATGGAAGTTGTGGAAGAACAGCTGAAGGAACTAGCCATGAGTTGCATTTTGGAATGCCAAAGCAAGCAAC TTGCCAGTCTGGCCTGGTAGTGTATCGATAGCACCATCCCTTGGTGCCAATGCCACATCATTATCGATGGCCTGCTAGAGTTATGCTTTAAGGAGAGCTTGCTGATTTCTGTA TTCTATGTGCACTTCTATAGAGTGATGTTTTGCGAGAACTTGTTCGC TGATGTTCTGATAGCCTTTTCGTAATGTGAATTATGTGAGGTTCTGCTGTTCTAAAAAA]




>consensus_6112#0
CGGCAAGCTATCTCGTGCTTTTCCAGGGTATTAGGTTTGGGGGGGAGGAGAGTAAGTAGG
ATAACCAGGTTGTGCATGACTGCATTAGCTTGCCTCGCCGGGAAAGCAATTTCTTGGAGC
AGTGGTGTCAAAGCAGCGGCTGGGTGTGGTCTCGGCTTGCTTCCGCAGTGGCGCGGCGTG
TTCCGGAGCGTGAGAATGGAGAGTGGGAGCTCTCAGGGTGGCCGTGGTGCCCTCATAGTC
CTGGAAGGGCTGGATAGGAGTGGGAAATCTTCGCAGTGTGCTCGGCTGCTGTCCTTTCTG
CAAGGTAAAGGTTGCCAGGCCGAAGGGTNGGCGGTTTCCTGATAGAGGTACTAGTGTTGG
GCAGATGATATCCGCGTACCTTGCGAACGAGTCGAACTTGACGATAGGACAATCCATTTG
CTCTTCAGTGCGAATCGCTGGGAGAAAAGAGCTTTGATGGAAAGAAAGCTACTTGGTGGA
ACTACTCTCATTGTTGATCGTTATTCTTATTCTGGAGTGGCATTTTCAGCTGCCAAGGGA
CTTGACATTGAGTGGTGCAAGGCTCCTGAAAATGGACTTATAGCCCCAGATCTTGTAGTA
TATTTGGATGTACAACCAGAGAAAGCAGCTGAAAGAGGAGGCTATGGGGGTGAGAGATAT
GAAAAAATTGAATTCCAAAAGAAAGTTGGTGAGCATTACCATTCACTTCGTGATTCAACA
TGGAAGGTTGTTGATGGCTCCCTTCCCATGGAAGTTGTGGAAGAACAGCTGAAGGAACTA
GCCATGAGTTGCATTCTGGAATGCCAAAGCAAGCAACTTGCCAGTCTGGCCTGGTAGTGT
ATCGATAGCACCATCCCTTGGTGCCAATGCCACATCATTATCGATGGCCTGCTAGAGTTA
TGCTTTAAGGAGAGCTTGCTGATTTCTGTATTCTATGTGCACTTCTATAGAGTGATGTTT
TGCGAGAACTTGTTCGCTGATGTTCTGATAGCCTTTTCGTAATGTGAATTATGTGAGGTT
CTGCTGTTCTAAAAAA
clustalw multiple alignements is not computed in this case