cluster # 6116

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Oryza sativa
cluster # 6116 cluster # 6116 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6116#0 length = 2786 sequences # 4
consensusID : consensus_6116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2786
fasta sequence
                              [ACCTCACCTCTCGCCATCGCCACCCCCAACCGCCGACGAGATCGAGGCCACCGGCGAGATCCGCCGCGAGATCCTCCCCTTCCCCTACTCCGATGCGATCGCCTCGGTTCTAGATCCCCCTCGCTCGCACGCGGCGGGGCATGATGGCGCAGGCGAGCGACCTGGAGCCGCTGCGGTCGGGGGCGGGGGCGCTGCCGTCGTCGGCGGACCCGGACTCGCCGTCGACGCCGAGGAGGAGCCGCGTGCGCGAGCTGCTGCGGAGCCTGGACCGCCGGCTGTCCAGCCGGGGGCGGCACCACCGCCACGCAGCGGAGGGCGCGGCGGCGTCCCCCAGGGGCGGCGGCGGCGGGGAGCCCGGGTCCGAGGACAGCGACGAGCTCGGGGACGGCGCGCCGCCCGAGTGGGCGCTGCTGCTCGTCGGCTGCCTCCTCGGCCTCGCCACCGGCATCTGCGTCGCTGCGTTCAACCGCGGGGTGCATATCATACATGAATGGGCATGGGCAGGCACACCCACAGAGGGAGCTGCTTGGCTTCGCCTCCAGAGACTTGCTGATACATGGCATAGGATATTGTTAATTCCAGTGACTGGTGGAGTTGTTGTTGGTATGATGCACGGATTACTGGAGATATTTGAGCAGATAAAACAATCATTATCATCTCAAAGGGAAGGTGTTGATTTCATGGCTGCGATTTTTCCTACAATCAAAGCAATACAAGCTGCAATTACTCTAGGGACGGGATGTTCATTGGGGCCAGAAGGGCCAAGCGTTGATATTGGTAAATCTTGTGCATATGGATGTGCTGAAATGATGGAGAACAATAGGGAACGGAGAATTGCTCTTGTTGCTGCCGGATCAGCTGCTGGGATTGCTTCAGGTTTTAATGCTGCGGTTGCTGGATGTTTTTTTGCTATTGAAACAGTACTGAGGCCACTTCGAGCAGAGAATTCACCGCCATTTACCACTGCTATGATTATATTGGCATCAGTTATATCATCAACTGTGTCCACTGTTTTGCTAAGGGAGAAGGCAGCTTTTATTGTCCCGACGTATGAACTAAAATCTGCTGCTGAGTTACCACTCTACCTTATCCTAGGCATGCTTTGTGGGGTAGTGAGTGTGGCATTCAGACAGTTGGTGGTTTGGTTCACAAAGACTTTTGACTTGATAAGGAAGAAATTCAGCCTCCCTGCTGTAGTATGCCCTGCGTTAGGGGGTCTTGGAGCAGGTTTAATAGCTCTAAGGTACCCTGGAATACTGTACTGGGGCTTCACCAATGTTGATGAAATTTTACATACTGGAAAAAGTGCCTCAGCCCCTGGAATCTGGCTCTTAGCTCAGTTGGCTGCTGCAAAAGTTGTAGCAACTGCACTCTGCAAGGGTTCTGGTCTTGTTGGTGGCCTTTATGCTCCAAGCTTGATGATTGGTGCTGCTGTTGGTGCTGTATTTGGAGGCTCAGCAGCAGAACTAATAAACTCTGCCATCCCGGGTAACACTGCTGTTGCACACCCTCAAGCTTATGCACTAGTGGGAATGGCTGCCACACTAGCATCAGTCTGCTCAGTTCCATTGACTTCAGTACTACTACTATTCGAACTAACAAAAGATTACAGAATTTTACTGCCTCTGATGGGAGCTGTTGGTTTAGCAATATGGGTGCCATCTGTTGTAATGTCTGGCAACAAAGAGGCGTTTGAGGCTACATCTCCTCGGCATGGTTATTCTTCACTATTACCTCCTACAGATAGGAATGAGACAGACCGGAGACGACCAGACAGAGATGACGTTGAACTTGCAATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATTTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACGGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAAATATATAAGCGGTGATGGTGTGATTCGCTTTTGTTAGCGTTGACTGTTTCGAAGTTCTGACATGACAGTATACTGGGTACACTTTGGTCTGTCCCGCAAAAAAGCATTGCAAATGGTGACTGTTTATTGTTTCTGTCCGATCTTCTGCTGCACGTCAATTACTGGATAATGCAAATCTGCGGACCAGTTACTCCTGTAAAGTTATAAAATACCTTTT]

[+] EMBL AK120828             [ACCTCACCTCTCGCCATCGCCACCCCCAACCGCCGACGAGATCGAGGCCACCGGCGAGATCCGCCGCGAGATCCTCCCCTTCCCCTACTCCGATGCGATCGCCTCGGTTCTAGATCCCCCTCGCTCGCACGCGGCGGGGCATGATGGCGCAGGCGAGCGACCTGGAGCCGCTGCGGTCGGGGGCGGGGGCGCTGCCGTCGTCGGCGGACCCGGACTCGCCGTCGACGCCGAGGAGGAGCCGCGTGCGCGAGCTGCTGCGGAGCCTGGACCGCCGGCTGTCCAGCCGGGGGCGGCACCACCGCCACGCAGCGGAGGGCGCGGCGGCGTCCCCCAGGGGCGGCGGCGGCGGGGAGCCCGGGTCCGAGGACAGCGACGAGCTCGGGGACGGCGCGCCGCCCGAGTGGGCGCTGCTGCTCGTCGGCTGCCTCCTCGGCCTCGCCACCGGCATCTGCGTCGCTGCGTTCAACCGCGGGGTGCATATCATACATGAATGGGCATGGGCAGGCACACCCACAGAGGGAGCTGCTTGGCTTCGCCTCCAGAGACTTGCTGATACATGGCATAGGATATTGTTAATTCCAGTGACTGGTGGAGTTGTTGTTGGTATGATGCACGGATTACTGGAGATATTTGAGCAGATAAAACAATCATTATCATCTCAAAGGGAAGGTGTTGATTTCATGGCTGCGATTTTTCCTACAATCAAAGCAATACAAGCTGCAATTACTCTAGGGACGGGATGTTCATTGGGGCCAGAAGGGCCAAGCGTTGATATTGGTAAATCTTGTGCATATGGATGTGCTGAAATGATGGAGAACAATAGGGAACGGAGAATTGCTCTTGTTGCTGCCGGATCAGCTGCTGGGATTGCTTCAGGTTTTAATGCTGCGGTTGCTGGATGTTTTTTTGCTATTGAAACAGTACTGAGGCCACTTCGAGCAGAGAATTCACCGCCATTTACCACTGCTATGATTATATTGGCATCAGTTATATCATCAACTGTGTCCACTGTTTTGCTAAGGGAGAAGGCAGCTTTTATTGTCCCGACGTATGAACTAAAATCTGCTGCTGAGTTACCACTCTACCTTATCCTAGGCATGCTTTGTGGGGTAGTGAGTGTGGCATTCAGACAGTTGGTGGTTTGGTTCACAAAGACTTTTGACTTGATAAGGAAGAAATTCAGCCTCCCTGCTGTAGTATGCCCTGCGTTAGGGGGTCTTGGAGCAGGTTTAATAGCTCTAAGGTACCCTGGAATACTGTACTGGGGCTTCACCAATGTTGATGAAATTTTACATACTGGAAAAAGTGCCTCAGCCCCTGGAATCTGGCTCTTAGCTCAGTTGGCTGCTGCAAAAGTTGTAGCAACTGCACTCTGCAAGGGTTCTGGTCTTGTTGGTGGCCTTTATGCTCCAAGCTTGATGATTGGTGCTGCTGTTGGTGCTGTATTTGGAGGCTCAGCAGCAGAACTAATAAACTCTGCCATCCCGGGTAACACTGCTGTTGCACACCCTCAAGCTTATGCACTAGTGGGAATGGCTGCCACACTAGCATCAGTCTGCTCAGTTCCATTGACTTCAGTACTACTACTATTCGAACTAACAAAAGATTACAGAATTTTACTGCCTCTGATGGGAGCTGTTGGTTTAGCAATATGGGTGCCATCTGTTGTAATGTCTGGCAACAAAGAGGCGTTTGAGGCTACATCTCCTCGGCATGGTTATTCTTCACTATTACCTCCTACAGATAGGAATGAGACAGACCGGAGACGACCAGACAGAGATGACGTTGAACTTGCAATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATTTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACGGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAAATATATAAGCGGTGATGGTGTGATTCGCTTTTGTTAGCGTTGACTGTTTCGAAGTTCTGACATGACAGTATACTGGGTACACTTTGGTCTGTCCCGCAAAAAAGCATTGCAAATGGTGACTGTTTATTGTTTCTGTCCGATCTTCTGCTGCACGTCAATTACTGGATAATGCAAATCTGCGGACCAGTTACTCCTGTAAAGTTATAAAATACCTTTT]
[-] EMBL CB631254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTTGAACTTGC ATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATNTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACAGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAGATATATAAGCGGTGATGGTGTGATTCGCTTTTGT                                                                                                                                                                                       ]
[+] EMBL CA763802             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAGGGGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB631253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGCAACAAGGCTTATGCATGATAAGCAGCAAAATCGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTATTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTCCCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAAATCTGAGCACTGCTAAGGTGATCATGGAAGTGAAAGGTATCAACCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATAATTCAATAGGCCGGTCCTTAAGGGAAGATCTTGAGCCCCCGAAATCCACATATCAAAGAGAAAATTTCCAACAATCAGGTGCTAATGGCCCCTCATCAAAAAGA                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_6116#0
ACCTCACCTCTCGCCATCGCCACCCCCAACCGCCGACGAGATCGAGGCCACCGGCGAGAT
CCGCCGCGAGATCCTCCCCTTCCCCTACTCCGATGCGATCGCCTCGGTTCTAGATCCCCC
TCGCTCGCACGCGGCGGGGCATGATGGCGCAGGCGAGCGACCTGGAGCCGCTGCGGTCGG
GGGCGGGGGCGCTGCCGTCGTCGGCGGACCCGGACTCGCCGTCGACGCCGAGGAGGAGCC
GCGTGCGCGAGCTGCTGCGGAGCCTGGACCGCCGGCTGTCCAGCCGGGGGCGGCACCACC
GCCACGCAGCGGAGGGCGCGGCGGCGTCCCCCAGGGGCGGCGGCGGCGGGGAGCCCGGGT
CCGAGGACAGCGACGAGCTCGGGGACGGCGCGCCGCCCGAGTGGGCGCTGCTGCTCGTCG
GCTGCCTCCTCGGCCTCGCCACCGGCATCTGCGTCGCTGCGTTCAACCGCGGGGTGCATA
TCATACATGAATGGGCATGGGCAGGCACACCCACAGAGGGAGCTGCTTGGCTTCGCCTCC
AGAGACTTGCTGATACATGGCATAGGATATTGTTAATTCCAGTGACTGGTGGAGTTGTTG
TTGGTATGATGCACGGATTACTGGAGATATTTGAGCAGATAAAACAATCATTATCATCTC
AAAGGGAAGGTGTTGATTTCATGGCTGCGATTTTTCCTACAATCAAAGCAATACAAGCTG
CAATTACTCTAGGGACGGGATGTTCATTGGGGCCAGAAGGGCCAAGCGTTGATATTGGTA
AATCTTGTGCATATGGATGTGCTGAAATGATGGAGAACAATAGGGAACGGAGAATTGCTC
TTGTTGCTGCCGGATCAGCTGCTGGGATTGCTTCAGGTTTTAATGCTGCGGTTGCTGGAT
GTTTTTTTGCTATTGAAACAGTACTGAGGCCACTTCGAGCAGAGAATTCACCGCCATTTA
CCACTGCTATGATTATATTGGCATCAGTTATATCATCAACTGTGTCCACTGTTTTGCTAA
GGGAGAAGGCAGCTTTTATTGTCCCGACGTATGAACTAAAATCTGCTGCTGAGTTACCAC
TCTACCTTATCCTAGGCATGCTTTGTGGGGTAGTGAGTGTGGCATTCAGACAGTTGGTGG
TTTGGTTCACAAAGACTTTTGACTTGATAAGGAAGAAATTCAGCCTCCCTGCTGTAGTAT
GCCCTGCGTTAGGGGGTCTTGGAGCAGGTTTAATAGCTCTAAGGTACCCTGGAATACTGT
ACTGGGGCTTCACCAATGTTGATGAAATTTTACATACTGGAAAAAGTGCCTCAGCCCCTG
GAATCTGGCTCTTAGCTCAGTTGGCTGCTGCAAAAGTTGTAGCAACTGCACTCTGCAAGG
GTTCTGGTCTTGTTGGTGGCCTTTATGCTCCAAGCTTGATGATTGGTGCTGCTGTTGGTG
CTGTATTTGGAGGCTCAGCAGCAGAACTAATAAACTCTGCCATCCCGGGTAACACTGCTG
TTGCACACCCTCAAGCTTATGCACTAGTGGGAATGGCTGCCACACTAGCATCAGTCTGCT
CAGTTCCATTGACTTCAGTACTACTACTATTCGAACTAACAAAAGATTACAGAATTTTAC
TGCCTCTGATGGGAGCTGTTGGTTTAGCAATATGGGTGCCATCTGTTGTAATGTCTGGCA
ACAAAGAGGCGTTTGAGGCTACATCTCCTCGGCATGGTTATTCTTCACTATTACCTCCTA
CAGATAGGAATGAGACAGACCGGAGACGACCAGACAGAGATGACGTTGAACTTGCAATTC
TAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATTTAA
AGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACGGTGACTATCAAGG
AGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAG
ATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAAT
TAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTC
TTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGA
CCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCA
AGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCC
TTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGA
AAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAA
GAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGA
CATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAA
TGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAAATATATAAGCG
GTGATGGTGTGATTCGCTTTTGTTAGCGTTGACTGTTTCGAAGTTCTGACATGACAGTAT
ACTGGGTACACTTTGGTCTGTCCCGCAAAAAAGCATTGCAAATGGTGACTGTTTATTGTT
TCTGTCCGATCTTCTGCTGCACGTCAATTACTGGATAATGCAAATCTGCGGACCAGTTAC
TCCTGTAAAGTTATAAAATACCTTTT
clustalw multiple alignements is not computed in this case