These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2786 fasta sequence [ACCTCACCTCTCGCCATCGCCACCCCCAACCGCCGACGAGATCGAGGCCACCGGCGAGATCCGCCGCGAGATCCTCCCCTTCCCCTACTCCGATGCGATCGCCTCGGTTCTAGATCCCCCTCGCTCGCACGCGGCGGGGCATGATGGCGCAGGCGAGCGACCTGGAGCCGCTGCGGTCGGGGGCGGGGGCGCTGCCGTCGTCGGCGGACCCGGACTCGCCGTCGACGCCGAGGAGGAGCCGCGTGCGCGAGCTGCTGCGGAGCCTGGACCGCCGGCTGTCCAGCCGGGGGCGGCACCACCGCCACGCAGCGGAGGGCGCGGCGGCGTCCCCCAGGGGCGGCGGCGGCGGGGAGCCCGGGTCCGAGGACAGCGACGAGCTCGGGGACGGCGCGCCGCCCGAGTGGGCGCTGCTGCTCGTCGGCTGCCTCCTCGGCCTCGCCACCGGCATCTGCGTCGCTGCGTTCAACCGCGGGGTGCATATCATACATGAATGGGCATGGGCAGGCACACCCACAGAGGGAGCTGCTTGGCTTCGCCTCCAGAGACTTGCTGATACATGGCATAGGATATTGTTAATTCCAGTGACTGGTGGAGTTGTTGTTGGTATGATGCACGGATTACTGGAGATATTTGAGCAGATAAAACAATCATTATCATCTCAAAGGGAAGGTGTTGATTTCATGGCTGCGATTTTTCCTACAATCAAAGCAATACAAGCTGCAATTACTCTAGGGACGGGATGTTCATTGGGGCCAGAAGGGCCAAGCGTTGATATTGGTAAATCTTGTGCATATGGATGTGCTGAAATGATGGAGAACAATAGGGAACGGAGAATTGCTCTTGTTGCTGCCGGATCAGCTGCTGGGATTGCTTCAGGTTTTAATGCTGCGGTTGCTGGATGTTTTTTTGCTATTGAAACAGTACTGAGGCCACTTCGAGCAGAGAATTCACCGCCATTTACCACTGCTATGATTATATTGGCATCAGTTATATCATCAACTGTGTCCACTGTTTTGCTAAGGGAGAAGGCAGCTTTTATTGTCCCGACGTATGAACTAAAATCTGCTGCTGAGTTACCACTCTACCTTATCCTAGGCATGCTTTGTGGGGTAGTGAGTGTGGCATTCAGACAGTTGGTGGTTTGGTTCACAAAGACTTTTGACTTGATAAGGAAGAAATTCAGCCTCCCTGCTGTAGTATGCCCTGCGTTAGGGGGTCTTGGAGCAGGTTTAATAGCTCTAAGGTACCCTGGAATACTGTACTGGGGCTTCACCAATGTTGATGAAATTTTACATACTGGAAAAAGTGCCTCAGCCCCTGGAATCTGGCTCTTAGCTCAGTTGGCTGCTGCAAAAGTTGTAGCAACTGCACTCTGCAAGGGTTCTGGTCTTGTTGGTGGCCTTTATGCTCCAAGCTTGATGATTGGTGCTGCTGTTGGTGCTGTATTTGGAGGCTCAGCAGCAGAACTAATAAACTCTGCCATCCCGGGTAACACTGCTGTTGCACACCCTCAAGCTTATGCACTAGTGGGAATGGCTGCCACACTAGCATCAGTCTGCTCAGTTCCATTGACTTCAGTACTACTACTATTCGAACTAACAAAAGATTACAGAATTTTACTGCCTCTGATGGGAGCTGTTGGTTTAGCAATATGGGTGCCATCTGTTGTAATGTCTGGCAACAAAGAGGCGTTTGAGGCTACATCTCCTCGGCATGGTTATTCTTCACTATTACCTCCTACAGATAGGAATGAGACAGACCGGAGACGACCAGACAGAGATGACGTTGAACTTGCAATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATTTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACGGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAAATATATAAGCGGTGATGGTGTGATTCGCTTTTGTTAGCGTTGACTGTTTCGAAGTTCTGACATGACAGTATACTGGGTACACTTTGGTCTGTCCCGCAAAAAAGCATTGCAAATGGTGACTGTTTATTGTTTCTGTCCGATCTTCTGCTGCACGTCAATTACTGGATAATGCAAATCTGCGGACCAGTTACTCCTGTAAAGTTATAAAATACCTTTT] [+] EMBL AK120828 [ACCTCACCTCTCGCCATCGCCACCCCCAACCGCCGACGAGATCGAGGCCACCGGCGAGATCCGCCGCGAGATCCTCCCCTTCCCCTACTCCGATGCGATCGCCTCGGTTCTAGATCCCCCTCGCTCGCACGCGGCGGGGCATGATGGCGCAGGCGAGCGACCTGGAGCCGCTGCGGTCGGGGGCGGGGGCGCTGCCGTCGTCGGCGGACCCGGACTCGCCGTCGACGCCGAGGAGGAGCCGCGTGCGCGAGCTGCTGCGGAGCCTGGACCGCCGGCTGTCCAGCCGGGGGCGGCACCACCGCCACGCAGCGGAGGGCGCGGCGGCGTCCCCCAGGGGCGGCGGCGGCGGGGAGCCCGGGTCCGAGGACAGCGACGAGCTCGGGGACGGCGCGCCGCCCGAGTGGGCGCTGCTGCTCGTCGGCTGCCTCCTCGGCCTCGCCACCGGCATCTGCGTCGCTGCGTTCAACCGCGGGGTGCATATCATACATGAATGGGCATGGGCAGGCACACCCACAGAGGGAGCTGCTTGGCTTCGCCTCCAGAGACTTGCTGATACATGGCATAGGATATTGTTAATTCCAGTGACTGGTGGAGTTGTTGTTGGTATGATGCACGGATTACTGGAGATATTTGAGCAGATAAAACAATCATTATCATCTCAAAGGGAAGGTGTTGATTTCATGGCTGCGATTTTTCCTACAATCAAAGCAATACAAGCTGCAATTACTCTAGGGACGGGATGTTCATTGGGGCCAGAAGGGCCAAGCGTTGATATTGGTAAATCTTGTGCATATGGATGTGCTGAAATGATGGAGAACAATAGGGAACGGAGAATTGCTCTTGTTGCTGCCGGATCAGCTGCTGGGATTGCTTCAGGTTTTAATGCTGCGGTTGCTGGATGTTTTTTTGCTATTGAAACAGTACTGAGGCCACTTCGAGCAGAGAATTCACCGCCATTTACCACTGCTATGATTATATTGGCATCAGTTATATCATCAACTGTGTCCACTGTTTTGCTAAGGGAGAAGGCAGCTTTTATTGTCCCGACGTATGAACTAAAATCTGCTGCTGAGTTACCACTCTACCTTATCCTAGGCATGCTTTGTGGGGTAGTGAGTGTGGCATTCAGACAGTTGGTGGTTTGGTTCACAAAGACTTTTGACTTGATAAGGAAGAAATTCAGCCTCCCTGCTGTAGTATGCCCTGCGTTAGGGGGTCTTGGAGCAGGTTTAATAGCTCTAAGGTACCCTGGAATACTGTACTGGGGCTTCACCAATGTTGATGAAATTTTACATACTGGAAAAAGTGCCTCAGCCCCTGGAATCTGGCTCTTAGCTCAGTTGGCTGCTGCAAAAGTTGTAGCAACTGCACTCTGCAAGGGTTCTGGTCTTGTTGGTGGCCTTTATGCTCCAAGCTTGATGATTGGTGCTGCTGTTGGTGCTGTATTTGGAGGCTCAGCAGCAGAACTAATAAACTCTGCCATCCCGGGTAACACTGCTGTTGCACACCCTCAAGCTTATGCACTAGTGGGAATGGCTGCCACACTAGCATCAGTCTGCTCAGTTCCATTGACTTCAGTACTACTACTATTCGAACTAACAAAAGATTACAGAATTTTACTGCCTCTGATGGGAGCTGTTGGTTTAGCAATATGGGTGCCATCTGTTGTAATGTCTGGCAACAAAGAGGCGTTTGAGGCTACATCTCCTCGGCATGGTTATTCTTCACTATTACCTCCTACAGATAGGAATGAGACAGACCGGAGACGACCAGACAGAGATGACGTTGAACTTGCAATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATTTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACGGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAAATATATAAGCGGTGATGGTGTGATTCGCTTTTGTTAGCGTTGACTGTTTCGAAGTTCTGACATGACAGTATACTGGGTACACTTTGGTCTGTCCCGCAAAAAAGCATTGCAAATGGTGACTGTTTATTGTTTCTGTCCGATCTTCTGCTGCACGTCAATTACTGGATAATGCAAATCTGCGGACCAGTTACTCCTGTAAAGTTATAAAATACCTTTT] [-] EMBL CB631254 [ CGTTGAACTTGC ATTCTAGACGATGATCCCTACCGCTATGGTATTAACAATGAGGATATGCTTCTTGATGATNTAAAGGTATCACAAGCAATGTCAAAGCAATTTATTAAGGTTACACCTACAGTGACTATCAAGGAGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAGAGCTTGAGCGGTGGAAAGCCATTTATCAAAGAGAGAATTTCCAGCAGTCAGCTGTTAATGGCCACTGAGCAAAAAGAAGTGCTGAAGTTTTGGTTGTACGTTTTAGTGAAGAGAAATACCAAATTTATAAAGTGACATTTCAACATGATTAGGGTTAACTTAAAACCTCCTCACTCAAAAAATATCCTCGTCAAATGTAAAGTTTCTTGGAGTTGCCACATATGCACATTTTTGTGCAGAGAAGATATATAAGCGGTGATGGTGTGATTCGCTTTTGT ] [+] EMBL CA763802 [ CAAGGGGGCAACAAGGCTTATGCATGATAAGCAGCAAAATTGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTCTTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTACCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAGATCTGAGCACTGCTAAGGTGCTCATGGAAGTGAAAGGTATCAAGCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATGATTCAATAGGGTGGTGCTTAAGGGAAG ] [-] EMBL CB631253 [ AGGCAACAAGGCTTATGCATGATAAGCAGCAAAATCGTGTTCTTGTAGTAGACAGTGAAGATTTTCTTGAAGGAATTGTTACGATTGGTGACATTCGCCGTAAAGGATTTGAATCTGAATTAAGTGAAGATACTCCACGGAATGGGGCAAATTCATCTACTTTGGATGCAAATTATTCTCTTGTTTCATCATGCCTCACTAGAGGGTTTCAGTCCCACGGCAATGAAAGAGGACTAGTGACCTGCTTTCCAGATACAAATCTGAGCACTGCTAAGGTGATCATGGAAGTGAAAGGTATCAACCAACTTCCAGTGGTAAAACGGAGGGCTGGCCGTAGGAATGATGGAAGACGTAAGGTCCTTGGCCTTCTTCATTATAATTCAATAGGCCGGTCCTTAAGGGAAGATCTTGAGCCCCCGAAATCCACATATCAAAGAGAAAATTTCCAACAATCAGGTGCTAATGGCCCCTCATCAAAAAGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||