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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6123 cluster # 6123       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6123#0 length = 624 sequences # 4  

consensusID : consensus_6123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 624
fasta sequence
                              [AGCACAAGAAACACAACGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT-CCAGCGCTC-ATAAGATAAAC-TTTGG-TTG-AGTACAATA-GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTTTGCTTGGAGCACCTGTAATTAATTGTTTGCTGTTTAATGGACAAATAGGTCCTCAAATTACTACAGTATTTGTGATAAATAGAAAGGCACCGATGAAAAACTTAAATATTATAGGATTTCAGATGCACTTGGGGAGCATCATCGGAGCGAGGATTGCGTGTTTCACACTGATAAATAAAAC]

[+] EMBL AK107857             [AGCACAAGAAACACAACGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTTTGCTTGGAGCACCTGTAATTAATTGTTTGCTGTTTAATGGACAAATAGGTCCTCAAATTACTACAGTATTTGTGATAAATAGAAAGGCACCGATGAAAAACTTAAATATTATAGGATTTCAGATGCACTTGGGGAGCATCATCGGAGCGAGGATTGCGTGTTTCACACTGATAAATAAAAC]
[+] EMBL C27497               [                CGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCANGGCNGCTTAACAATTCTNCCA CGCTCAATAAGGTAAACTTTTGGTTTGNGGTACAATAGGTACTtc                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU085773             [                                        AAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCT GCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATANTGACAATGCATTAGATTTGGGGTTAAAANTTGTATNCTTGGAGCAaaaana                                                                                                                                                                    ]
[+] EMBL AU085772             [                                                            TCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGT GNGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCGGTTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTT                                                                                                                                                                                     ]


>consensus_6123#0 AGCACAAGAAACACAACGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAA TCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTT AGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTG GTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGG GTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCTCCAGCGCTCATAAGAT AAACTTTGGTTGAGTACAATAGTACTCAAGTATCATGTTTTTGTACATAATAGATTTATA TATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCAT TAGATTTGGGGTTAAAAGTTGTTTGCTTGGAGCACCTGTAATTAATTGTTTGCTGTTTAA TGGACAAATAGGTCCTCAAATTACTACAGTATTTGTGATAAATAGAAAGGCACCGATGAA AAACTTAAATATTATAGGATTTCAGATGCACTTGGGGAGCATCATCGGAGCGAGGATTGC GTGTTTCACACTGATAAATAAAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)