These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6123#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 624 fasta sequence [AGCACAAGAAACACAACGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT-CCAGCGCTC-ATAAGATAAAC-TTTGG-TTG-AGTACAATA-GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTTTGCTTGGAGCACCTGTAATTAATTGTTTGCTGTTTAATGGACAAATAGGTCCTCAAATTACTACAGTATTTGTGATAAATAGAAAGGCACCGATGAAAAACTTAAATATTATAGGATTTCAGATGCACTTGGGGAGCATCATCGGAGCGAGGATTGCGTGTTTCACACTGATAAATAAAAC] [+] EMBL AK107857 [AGCACAAGAAACACAACGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTTTGCTTGGAGCACCTGTAATTAATTGTTTGCTGTTTAATGGACAAATAGGTCCTCAAATTACTACAGTATTTGTGATAAATAGAAAGGCACCGATGAAAAACTTAAATATTATAGGATTTCAGATGCACTTGGGGAGCATCATCGGAGCGAGGATTGCGTGTTTCACACTGATAAATAAAAC] [+] EMBL C27497 [ CGACACAGTAGCTCATCAAAGTTGAAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCANGGCNGCTTAACAATTCTNCCA CGCTCAATAAGGTAAACTTTTGGTTTGNGGTACAATAGGTACTtc ] [+] EMBL AU085773 [ AAACAAACTAGCAGAGGAAATCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGTGGCGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCT GCTCCGCCGGTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATANTGACAATGCATTAGATTTGGGGTTAAAANTTGTATNCTTGGAGCAaaaana ] [+] EMBL AU085772 [ TCCGGCTCCAGTTTGTGGTTCAGTTCATCGATCACACAGTCGTTTTTGTAGTAACTGTTTAGTCATGGGAGGCAAGAAGAGGAAATCCGGCTCCAGTTTGTGGTTGGCCGT GNGTCTTGGTTCGCGCGATTGGGCTCAAAGGTGGTGGCGAGCTCTGGCTCCGCGGTTGGCCGCGCAGGGTATGATGCGGCTGGCGAGATGGTCAGGGCGGCTAAACATTTCT CCAGCGCTC ATAAGATAAAC TTTGG TTG AGTACAATA GTACTCAAGTATCATGTTTTTGTACATAATAGATTTATATATGTGGTTTTCGCTTTGACTTTATTGTAGCACAAGTGTACATGTATAGTGACAATGCATTAGATTTGGGGTTAAAAGTTGTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||