These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6133#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1432 fasta sequence [ATCCGTCGCAGTCGTCTCCGGCGAGAAATCGGCTGCGCCCCGTCTCTCTCTCTCTCGAACGCTTCCATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCGCCGTGCTTTC---GCTGGGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGCTGCCGGAATCCCCGTTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCGTCGTCGGCAAAGCGGAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACACTGACTACAGGGGATCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACTTCGGCGAGCCGGCGCCTTTCGGCTACGACTACAGT-GCACAGGGCGAAGGCGGCGGCGGCGGCGCCGCCGCCGCCGCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACAAATACGTCGGCGCGAGGAAGCTCCGC-GGCGGCAGCAGCACCGCCGGCGGAGAGAATGATGACGAGCCTTTCGGGTACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGACGACGGCGCGAGGCGTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGGTGCGCGTCGGCGAGAGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCTTCCTGCCGCGCCGCGTCGCGGACTCCATCCCGTTCACGGCGGCCGCGCTGCCGGCCGTCCTCGCGCTGTTCGGCGTCGCGCCGGACACCGCCGAGGCGGCCGGCATGAGGGAGACGCTGCGCACGTGCGAGTGGCCGACCCTCGCCGGCGAGTCCAAGTTCTGCGCCACGTCGCTGGAGGCCCTGGTGGAGGGCGCCATGGCGGCGCTCGGGACACGCGACATCGCCGCGCTGGCGTCGACGCTGCCCCGCGGCGGCGCGCCGCTGCAGGCGTACGCCGTCCGCGCCGTGCTCCCCGTCGAGGGCGCCGGCTTCGTGGCGTGCCACGACCAGGCGTACCCGTACACCGTGTACCGCTGCCACACCACCGGCCCGGCCAGAGCTTACATGGTGGAGATGGAAGGCGACGGCGGCGGCGATGGCGGCGAGGCGGTGACCGTGGCCACCGTGTGCCACACCAACACGTCGCGGTGGAACCCGGAGCACGTCTCGTTCAAGCTCCTCGGCACCAAGCCCGGCGGCTCGCCGGTGTGCCACCTCATGCCGTACGGGCACATCGTCTGGGCCAAGAACGTGAAGAGCTCGACGGCGTAGGGCTCCAACTCCGGCGACGGCATTGTGAGCTATGCACGATGCATTATGCATCTTTTTATGTATGTTATTCGTGTCAGCTGCTGTAATGTCCACATCTAGAGGGATTATACTACCTGTAATAAATAAC] [+] EMBL AK120942 [ATCCGTCGCAGTCGTCTCCGGCGAGAAATCGGCTGCGCCCCGTCTCTCTCTCTCTCGAACGCTTCCATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCGCCGTGCTTTC GCTGGGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGCTGCCGGAATCCCCGTTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCGTCGTCGGCAAAGCGGAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACACTGACTACAGGGGATCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACTTCGGCGAGCCGGCGCCTTTCGGCTACGACTACAGT GCACAGGGCG AGGCGGCGGCGGCGGCGCCGCCGCCGCCGCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACAAATACGTCGGCGCGAGGAAGCTCCGC GGCGGCAGCAGCACCGCCGGCGGAGAGAATGATGACGAGCCTTTCGGGTACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGACGACGGCGCGAGGCGTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGGTGCGCGTCGGCGAGAGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCTTCCTGCCGCGCCGCGTCGCGGACTCCATCCCGTTCACGGCGGCCGCGCTGCCGGCCGTCCTCGCGCTGTTCGGCGTCGCGCCGGACACCGCCGAGGCGGCCGGCATGAGGGAGACGCTGCGCACGTGCGAGTGGCCGACCCTCGCCGGCGAGTCCAAGTTCTGCGCCACGTCGCTGGAGGCCCTGGTGGAGGGCGCCATGGCGGCGCTCGGGACACGCGACATCGCCGCGCTGGCGTCGACGCTGCCCCGCGGCGGCGCGCCGCTGCAGGCGTACGCCGTCCGCGCCGTGCTCCCCGTCGAGGGCGCCGGCTTCGTGGCGTGCCACGACCAGGCGTACCCGTACACCGTGTACCGCTGCCACACCACCGGCCCGGCCAGAGCTTACATGGTGGAGATGGAAGGCGACGGCGGCGGCGATGGCGGCGAGGCGGTGACCGTGGCCACCGTGTGCCACACCAACACGTCGCGGTGGAACCCGGAGCACGTCTCGTTCAAGCTCCTCGGCACCAAGCCCGGCGGCTCGCCGGTGTGCCACCTCATGCCGTACGGGCACATCGTCTGGGCCAAGAACGTGAAGAGCTCGACGGCGTAGGGCTCCAACTCCGGCGACGGCATTGTGAGCTATGCACGATGCATTATGCATCTTTTTATGTATGTTATTCGTGTCAGCTGCTGTAATGTCCACATCTAGAGGGATTATACTACCTGTAATAAATAAC] [+] EMBL OSA575667 [ GTCTCCGGCGAGAAATCGGCTGCGCCCCGTCTCTCTCTCTCTCGAACGCTTCCATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCGCCGTGCTTTC GCTGGGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGCTGCCGGAATCCCCGTTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCGTCGTCGGCAAAGCGGAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACACTGACTACAGGGGATCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACTTCGGCGAGCCGGCGCCTTTCGGCTACGACTACAGT GCACAGGGCGAAGGCGGCGGCGGCGGCGCCGCCGCCGCCGCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACAAATACGTCGGCGCGAGGAAGCTCCGC GGCGGCAGCAGCACCGCCGGCGGAGAGAATGATGACGAGCCTTTCGGGTACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGACGACGGCGCGAGGCGTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGGTGCGCGTCGGCGAGAGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCTTCCTGCCGCGCCGCGTCGCGGACTCCATCCCGTTCACGGCGGCCGCGCTGCCGGCCGTCCTCGCGCTGTTCGGCGTCGCGCCGGACACCGCCGAGGCGGCCGGCATGAGGGAGACGCTGCGCACGTGCGAGTGGCCGACCCTCGCCGGCGAGTCCAAGTTCTGCGCCACGTCGCTGGAGGCCCTGGTGGAGGGCGCCATGGCGGCGCTCGGGACACGCGACATCGCCGCGCTGGCGTCGACGCTGCCCCGCGGCGGCGCGCCGCTGCAGGCGTACGCCGTCCGCGCCGTGCTCCCCGTCGAGGGCGCCGGCTTCGTGGCGTGCCACGACCAGGCGTACCCGTACACCGTGTACCGCTGCCACACCACCGGCCCGGCCAGAGCTTACATGGTGGAGATGGAAGGCGACGGCGGCGGCGATGGCGGCGAGGCGGTGACCGTGGCCACCGTGTGCCACACCAACACGTCGCGGTGGAACCCGGAGCACGTCTCGTTCAAGCTCCTCGGCACCAAGCCCGGCGGCTCGCCGGTGTGCCACCTCATGCCGTACGGGCACATCGTCTGGGCCAAGAACGTGAAGAGCTC ] [+] EMBL C73962 [ GTCTCCGGCGAGAAATCGGCTGCGCCCCGTCTCTCTCTCTCTCGAACGCTTCCATGGCGCGCTTCCTCCTCCTCCTCGTCGCCGTCGCCGCTGCCGCCGCCGTGCTTTCGCAGCTGGGCGACGCGGCGCCGTCGACGGCCGAGGTGTTCTGGCGCGCCGTGCTGCCGGAATCCCCGTTGCCGGACGCCTTCCTCCGCCTCCTCCGCCCTGACACCAGCTTCGTCGTCGGCAAAGCGGAGGCGGCCGGTGGCGCGGCGCGGACCGGATTCCCCTTCGATTACACTGACTACAGGGGATCTGATTCTCCGACGACGGCGAGTGGTTTGGACCTCGCCGGTGACTTCGGCGAGCCGGCGCCTTTCGGCTACGACTACAGTGGCACAGGGCGAAGGGGGCGGCGGCGGCGCGGNCGCAG AG TGNAGAGCAGGTTCTTGCCGTCGANGCGGGCTTCAACTACGACAAATACGTCGGCGCGAGGAAGCTCCGCGGGCGGCAGCAGCANCGCCGGCGGAGAGAATGATGACGAACCTTTCGGGT ] [+] EMBL AU175219 [ CGCCGCCNCGGGAGAGCAGGTTCTTGCCGTCGACGCGGGCTTCAACTACGACAAATACGTCGGCGCGAGGAAG TCCGC GGCGGCAGCAGCACCGCCGGCGGAGAGAATGATGACGAGCCTTTCGGGTACGACTACAAGGCGCCGAGCAGCGGCAGCGGCACCGCGGCGTCGACGACGGCGCGAGGCGTCGGCACGGGCGCCACGACGACGGTGTTCTTCCACGAGGAGGCGGTGCGCGTCGGCGAGAGGCTCCCGTTCTACTTCCCGGCGGCGACGACGTCGGCGCTGGGCTTCCTG CGCTGC CGTCGCGGACTCCAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||