cluster # 6135

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Oryza sativa
cluster # 6135 cluster # 6135 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6135#0 length = 790 sequences # 4
consensusID : consensus_6135#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 790
fasta sequence
                              [TACACGAGCTCGGGAGGAAGGAAGGAAGGAAGGAAGGAATCGCAAGGCGAAGAGTCGGAGCTGGCGGAGGAGGAGGTGCTCGCGATGGGGTCCGAGGGATCCGCCGGGGTCGTCGTCGTTCCCAGAAACTTTAGACTGCTTGAAGAGCTTGAGCGAGGTGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATGGATGATGCTGATGACATATATATGCGTTCCTGGACAGGAACTATCATTGGCCCTCCTAATACTGTTCATGAGGGACGAATCTATCAGTTGAAGTTGTTCTGTGATACAGACTATCCAGACAGACCACCTACTGTTCGATTCCAGACTCGAATCAATATGTCATGTGTGAATCAAGAAACTGGAATGGTTGAACCAAGTCTATTCCCCATGCTTGGTAACTGGCAAAGAGAACATACAATGCAAGACATCCT-GATCGGCTTAAAAAAGGAGATGTCTGCTCCTCAGA-ATCGTAGGCTCC-ATCAACCCC-ATGATGG-CAATGAAG-ATCAAAGAGTAGAACAGAAAGGGCTATCGCTT-AGGTGTGTCATC-AT-GTAAGAGATGCGAATTG-CAATGTA-CAGTATTATTAAATTGAGTAG-CATCAGGCGCAAAAA--AGAGAA-CCCATGATCT-CCTGTAATTTGGCAGTAACTA-CATT-GGATCCAAA-CCGTGCTGTCG-CCTCAATAAAATGTCGGCAACTTCGTTAATTTGCACATTGTGTAAACCGTTCATCCCCTCGTTCAGTAAGATTGCAACTT-GCAAGNTGCAACCCATGTCTNCA]

[+] EMBL AK120951             [TACACGAGCTCGGGAGGAAGGAAGGAAGGAAGGAAGGAATCGCAAGGCGAAGAGTCGGAGCTGGCGGAGGAGGAGGTGCTCGCGATGGGGTCCGAGGGATCCGCCGGGGTCGTCGTCGTTCCCAGAAACTTTAGACTGCTTGAAGAGCTTGAGCGAGGTGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATGGATGATGCTGATGACATATATATGCGTTCCTGGACAGGAACTATCATTGGCCCTCCTAATACTGTTCATGAGGGACGAATCTATCAGTTGAAGTTGTTCTGTGATACAGACTATCCAGACAGACCACCTACTGTTCGATTCCAGACTCGAATCAATATGTCATGTGTGAATCAAGAAACTGGAATGGTTGAACCAAGTCTATTCCCCATGCTTGGTAACTGGCAAAGAGAACATACAATGCAAGACATCCT GATCGGCTTAAAAAAGGAGATGTCTGCTCCTCAGA ATCGTAGGCTCC ATCAACCCC ATGATGG CAATGAAG ATCAAAGAGTAGAACAGAAAGGGCTATCGCTT AGGTGTGTCATC AT GTAAGAGATGCGAATTG CAATGTA CAGTATTATTAAATTGAGTAG CATCAGGCGCAAAAA  AGAGAA CCCATGATCT CCTGTAATTTGGCAGTAACTA CATT GGATCCAAA CCGTGCTGTCG CCTCAATAAAATGTCGGCAACTTCGTTAATTTGCACATTGTGTAAACCGTTCATCCCCTCGTTCAGTAAGATTGCAACTT GCAA                   ]
[+] EMBL CA763865             [                                                                                                  ATCCGCCGGGGTCGTCGTCGTTCCCAGAAACTTTAGACTGCTTGAAGAGCTTGAGCGAGGTGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATGGATGATGCTGATGACATATATATGCGTTCCTGGACAGGAACTATCATTGGCCCTCCTAATACTGTTCATGAGGGACGAATCTATCAGTTGAAGTTGTTCTGTGATACAGACTATCCAGACAGACCACCTACTGTTCGATTCCAGACTCGAATCAATACGTCATGTGTGAATCAAGAAACTGGAATGGTTGAACCAAGTCTATTCCCCATGCTTGGTAACTGGCAAAGAGAACATACAATGCAAGACATCCT GATCGGCTTAAAAAAGGAGATGTCTGCTCCTCAGA ATCGTAGGCTCC ATCAACCCC ATGATGG CAATGAAG ATCAAAGAGTAGAACAGAAAGGGCTATCGCTT AGGTGTGTCATC AT GTAAGAGATGCGAATTG CAATGTA CAGTATTATTAAATTGAGTAG CATCAGGCGCAAAAAAGAGAGAA CCCATGATCT CCTGTAATTTGGCAGTAACTA CATT GGATCCAAA CCGTGCTGTCG TCTCAATAAAATGTCGGCAACTTCGTTAATCTGCACATTGTGTAAACCGTTCATCCCCTCGTTCAGTAAGATTGCAACTTGGCAAGNTGCAACCCATGTCTNCA]
[+] EMBL BI805314             [                                                                                                                                                                                                                                                                                                                                                                                              TGGTTGAACCAAGTCTATTCCCCATGCTTGGTAACTGGCAAAGAGAACATACAATGCAAGACATCCT GATCGGCTTAAAAAAGGAGATGTCTGCTCCTCAGA ATCGTAGGCTCC ATCAACCCC ATGATGG CAATGAAG ATC AAGAGTAGAACAGAAAGGGCTATCGCTT AGGTGTGTCATC AT GTAAGAGATGCGAATTG CAATGTA CAGTATTATTAAATTGAGTAG CATCAGGCGCAAAAA  AGAGAA CCCATGATCT CCTGTAATTTGGCAGTAACTA CATT GGATCC AA CCGTGCTGTCG CCTCAATAAAATGTCGGCAACTTCGTTAAaaaaa                                                                      ]
[+] EMBL BI805306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         actATCCTGGATCGGCTTAAAAAAGGAGATGTCTGCTCCTCAGATATCGTAGGCTCCTATCAACCCCTATGATGGCCAATGAAGTATCAAAGAGTAGACCAGAAAGGGCTATCGCTTAAGGTGTGTCATCAATGGTAAGAGATGCGAATTGCCAATGTACCAGTATTATTAAATTGAGTAGCCATCAGGCGCAAAAA  AGAGAACCCCATGATCTCCCTGTAATTGGCCAGTAACTACCATTGGGATCCAAACCCGTGCTGTCGCCCTCAATAAAATGTCGGCAACTTCGTTAATTTGCACATTGTGTAAACCGTTCATCCCCTCGTTCAGTAAGATTGCAACTT GCAAGTTGCAAaaaaaaa     ]




>consensus_6135#0
TACACGAGCTCGGGAGGAAGGAAGGAAGGAAGGAAGGAATCGCAAGGCGAAGAGTCGGAG
CTGGCGGAGGAGGAGGTGCTCGCGATGGGGTCCGAGGGATCCGCCGGGGTCGTCGTCGTT
CCCAGAAACTTTAGACTGCTTGAAGAGCTTGAGCGAGGTGAGAAGGGCATTGGTGATGGG
ACAGTGAGCTATGGAATGGATGATGCTGATGACATATATATGCGTTCCTGGACAGGAACT
ATCATTGGCCCTCCTAATACTGTTCATGAGGGACGAATCTATCAGTTGAAGTTGTTCTGT
GATACAGACTATCCAGACAGACCACCTACTGTTCGATTCCAGACTCGAATCAATATGTCA
TGTGTGAATCAAGAAACTGGAATGGTTGAACCAAGTCTATTCCCCATGCTTGGTAACTGG
CAAAGAGAACATACAATGCAAGACATCCTGATCGGCTTAAAAAAGGAGATGTCTGCTCCT
CAGAATCGTAGGCTCCATCAACCCCATGATGGCAATGAAGATCAAAGAGTAGAACAGAAA
GGGCTATCGCTTAGGTGTGTCATCATGTAAGAGATGCGAATTGCAATGTACAGTATTATT
AAATTGAGTAGCATCAGGCGCAAAAAAGAGAACCCATGATCTCCTGTAATTTGGCAGTAA
CTACATTGGATCCAAACCGTGCTGTCGCCTCAATAAAATGTCGGCAACTTCGTTAATTTG
CACATTGTGTAAACCGTTCATCCCCTCGTTCAGTAAGATTGCAACTTGCAAGNTGCAACC
CATGTCTNCA
clustalw multiple alignements is not computed in this case