cluster # 6149

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Oryza sativa
cluster # 6149 cluster # 6149 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6149#0 length = 553 sequences # 4

consensusID : consensus_6149#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 553
fasta sequence

                              [CCCCCTCCCGCGCCGCGCGCTCCTGGCGCCCGCTTCCCCGGCGCTCTTCTA--T-C-GCATC-GACGGCAACATG-C-GCCCCAA-GCGGAGTACCTCCTCGGCGACAT-GCCCGGGACGC-CGACGACCTCTTCGAGTTCCCGGAGTACTTCTCCTAC-GCGCTC-CCACGCGCATCGC-CCGCGCCACGAGGCCTGCGCCGCGCGGGGCGTCAGGAT-CC-GCTGCCGGCCATGCTCCGGCCGGGCGAC-GACAAGTTCAGGGCCACCCTCGCCGGCTGCGTCGGCTCCACGCCGCCGCGGAGGCGGTC-CCGCTATGGCACGCCTACTGGGTGGACGACGCCGGCGAGGTGGAGGAGATCGGGGCGGCGTCGCAGCCGTGACACGCGACGCGACGCGAGCGCGGCATGTGCATTATTTAGTAGTAAGTAGCGGGCGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATTGTCATCATCTCTGTAAGTAACATAAATCATCCGGTTGATTTCTCCT-GTTAATCAATCATCAATGGAAGCTCTTATAGTTCACA-TTGAAAAAAAAAA]

[+] EMBL BI801525             [CCCCCTCCCGCGCCGCGCGCTCCTGGCGCCCGCTTCCCCGGCGCTCTTCTA  T C GCATC GACGGCAACATG C GCCCCAA GCGGAGTACCTCCTCGGCGACAT GCCCGGGACGC CGACGACCTCTTCGAGTTCCCGGAGTACTTCTCCTAC GCGCTC CCACGCGCATCGC CCGCGCCACGAGGCCTGCGCCGC CGGGGCGTCAGGAT CC  CTGCC GCCATGCTCCGGCCGGGCGAC GACAAGTTCAGGGCCACCCTCGCC GCTGCGTCGGCTCCACGCCGCCGCGGA GCGGTC CCGCTATGGCACGCCTACTGGGTGGACGACGCCGGCGAGGTGGAGGAGATCGGGGCGGCGTCGCAGCCGTGACACGCGACGCGACGCGAGCGCGGCATGTGCATTATTTAGTAGTAAGTAGCGGGCGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATTGTCATCATCTCTGTAAGTAACATAAATCATCCGGTTGATTTCTCCT GTTAATC ATCATCAATGGAAGCTCTTATAGTTCACATTTGATAAAAA   ]
[+] EMBL BM422137             [                                           CTCTTCTACTTACGGCATCTGACGGCAACATGTC GGCCCAAGGCGGAGTACCTCCTCGGCGACATGGCCCGGGACGCTCGACGACCTCTTCGAGTTCCCGGAGTACTTCTCCTACTGCGCTCGCCACGCGCATCGCGCCGCGCCACGAGGCCTGCGCCGCGCGGGGCGTCAGGATGCCAGCTGCCGGCCATGCTCCGGCCGGGCGACAGACAAGTTCAGGGCCACCCTCGCCGGCTGCGTCGGCTCCACGCC CCGCGGAGGCGGTCGCCGCTATGGCACGCCTACTGGGTGGACGACGCCGGCGAGGTGGAGGAGATCGGGGCGGCGTCGCAGCCGTGACACGCGACGCGACGCGAGCGCGGCATGTGCATTATTTAGTAGTAAGTANCGGGCGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATGGTCATCATCTCTGTAAGTAACATAAATCATCCGGTTGATTTCTCCTGGTTAATCAATCANCAATGGAAGCTCTTATAGTTCAAA    AAAAAAAA  ]
[+] EMBL BI812968             [                                                          CATC GACGGCAACATG CGGCCCCAA GCGGAGTACCTCCTCGGCGACAT GCCCGGGAC C CGACGACCTCTTCGAGTTCCCGGAGTACTTCTCCTAC GCGCTC CCACGCGCATCGC CCGC CCACGAGGCCTGC CCGCGCGGGGCGTCAGGAT CC GCTGCCGGCCATGCTCCGGCCGGGCGAC GACAAGTTCAGGGCCACCCTCGCCGGCTGCGTCGGCTCCACGCCGCCGCGGAGGCGGTCGCCGCTATGGCACGCCTACTGGGTGGACGAC CCGGCGAGGTGGAGGAGATC GGGCGGC TCGCA CCGTGACACGCGACGCGACGCGAGC CGGCATGTGCATTATTTAGTAGTAAGTAGCGGGCGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATTGTCATCATCTCTGTAAGTAACATAAATCATCCGGTTGATTTCTCCT GTTAATCAATCATCAATGGAAGCTCTTATAGTTCAC  TTGAAAAAAAAAA]
[+] EMBL BI812990             [                                                                                                                              GACCTCTTCGAGTTCCCGGAGTACTTCTCCTAC GCGCTCGCCACGCGCATCGC CCGCGCCACGAGGCCTGC CCGCGCGGGGCGTCAGGATGCC GCTGCCGGCCATGCTCCGGCCGGGCGAC GACAAGTTCAGGGCCACCCTCGCCGGCTGCGTCGGCTCCACGCCGCCGCGGAGGCGGTC CCGCTATGGCACGCCTACTGGGTGGACGACGCCGGCGAGGTGGAGGAGATCGGGGCGGCGTCGCAGCCGTGACACGCGACGCGACGCGAGCGCGGCATGTGCATTATTTAGTAGTAAGTAGCGGGCGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATTGTCATCATCTCTGTAAGTAACATAAATCATCCGGTTGATTTCTCCT GTTAATCAATCATCAATGGAAGCTCTTATAGTTCACA TTGAAAAAAAAAA]




>consensus_6149#0
CCCCCTCCCGCGCCGCGCGCTCCTGGCGCCCGCTTCCCCGGCGCTCTTCTATCGCATCGA
CGGCAACATGCGCCCCAAGCGGAGTACCTCCTCGGCGACATGCCCGGGACGCCGACGACC
TCTTCGAGTTCCCGGAGTACTTCTCCTACGCGCTCCCACGCGCATCGCCCGCGCCACGAG
GCCTGCGCCGCGCGGGGCGTCAGGATCCGCTGCCGGCCATGCTCCGGCCGGGCGACGACA
AGTTCAGGGCCACCCTCGCCGGCTGCGTCGGCTCCACGCCGCCGCGGAGGCGGTCCCGCT
ATGGCACGCCTACTGGGTGGACGACGCCGGCGAGGTGGAGGAGATCGGGGCGGCGTCGCA
GCCGTGACACGCGACGCGACGCGAGCGCGGCATGTGCATTATTTAGTAGTAAGTAGCGGG
CGTTCGTTGCCTGTGTAAGCTGTGCATAAACCACATTGTCATCATCTCTGTAAGTAACAT
AAATCATCCGGTTGATTTCTCCTGTTAATCAATCATCAATGGAAGCTCTTATAGTTCACA
TTGAAAAAAAAAA

clustalw multiple alignements is not computed in this case