cluster # 6166

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Oryza sativa
cluster # 6166 cluster # 6166 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6166#0 length = 2309 sequences # 4
consensusID : consensus_6166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2309
fasta sequence
                              [TACCTACCTTGGTGGCCTCCTCTCGCTCTCGCTCTCCTTCTCTTCCTGCACCTGTTGCACCCCCAACAACTCTCACTCACTGCCAGTGTCAAGCAAGATTATACAGCTTGGTCTCATCTCTTAATTCCAAGCTTGTTTCACCGACCTGCCAAACTCGATTGATCCACAGATAGATAGTACTTCTGGTTGGGATCTTGAGCTTATATAGACCAGGAAGCATGCGGGGAGCCATGAAGCCGTCGATCGTGCACTGCCTCAAGCTGCTCATGCTGCTGGCGCTCGGCGGGGTCACCATGCACGTCCCCGACGAGGACGACGTGGTCGCGTCGCTCGGGGCGCTGCGCCTCGACGGCCATTTCAGCTTCGACGACGCCCACGCCGCCGCCCGGGACTTCGGCAACCGGTGCAGCCTCCTGCCGGCGGCCGTGCTCCACCCTGGCTCGGTGTCCGACGTCGCCGCCACCGTCAGGCGCGTGTTCCAGCTGGGCAGGAGCTCGCCGCTCACCGTCGCGGCGCGCGGGCACGGCCACTCGCTCCTCGGCCAGTCCCAGGCCGCCGGCGGGATCGTCGTCAAGATGGAGTCCCTCGCCGCCGCCGCAGCCAGGGCGGTGCGGGTGCACGGCGGCGCGTCGCCCCACGTGGACGCCCCGGGCGGCGAGCTCTGGATCAACGTGCTGCATGAGACGCTCAAGCACGGGCTGGCGCCCAGGTCATGGACCGACTACCTCCATCTCACAGTCGGTGGCACCTTGTCGAATGCGGGGGTCAGCGGGCAGGCGTTCCGGCATGGACCGCAGGTCAGCAATGTCAACCAACTGGAGATTGTGACAGGGAGGGGAGAAGTTGTCACCTGCTCGCACGAGGTGAACTCTGATCTCTTCTACGCTGCTCTTGGCGGCCTGGGCCAGTTTGGGATCATCACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCAAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGAAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCA-TCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAAC-AAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG-AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGGTCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAATTGTAGCGAAAATATCCTTTGTAAAGACGAAATCTACGGAAGGTAGCTTAAAGAACACAGCGGGGCAACCAGTAGACTAGAACTCAAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCGAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGTGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTATGTTTGC-AAATGTTAAAGAAAAAAACAGCAAA]

[+] EMBL AK121317             [TACCTACCTTGGTGGCCTCCTCTCGCTCTCGCTCTCCTTCTCTTCCTGCACCTGTTGCACCCCCAACAACTCTCACTCACTGCCAGTGTCAAGCAAGATTATACAGCTTGGTCTCATCTCTTAATTCCAAGCTTGTTTCACCGACCTGCCAAACTCGATTGATCCACAGATAGATAGTACTTCTGGTTGGGATCTTGAGCTTATATAGACCAGGAAGCATGCGGGGAGCCATGAAGCCGTCGATCGTGCACTGCCTCAAGCTGCTCATGCTGCTGGCGCTCGGCGGGGTCACCATGCACGTCCCCGACGAGGACGACGTGGTCGCGTCGCTCGGGGCGCTGCGCCTCGACGGCCATTTCAGCTTCGACGACGCCCACGCCGCCGCCCGGGACTTCGGCAACCGGTGCAGCCTCCTGCCGGCGGCCGTGCTCCACCCTGGCTCGGTGTCCGACGTCGCCGCCACCGTCAGGCGCGTGTTCCAGCTGGGCAGGAGCTCGCCGCTCACCGTCGCGGCGCGCGGGCACGGCCACTCGCTCCTCGGCCAGTCCCAGGCCGCCGGCGGGATCGTCGTCAAGATGGAGTCCCTCGCCGCCGCCGCAGCCAGGGCGGTGCGGGTGCACGGCGGCGCGTCGCCCCACGTGGACGCCCCGGGCGGCGAGCTCTGGATCAACGTGCTGCATGAGACGCTCAAGCACGGGCTGGCGCCCAGGTCATGGACCGACTACCTCCATCTCACAGTCGGTGGCACCTTGTCGAATGCGGGGGTCAGCGGGCAGGCGTTCCGGCATGGACCGCAGGTCAGCAATGTCAACCAACTGGAGATTGTGACAGGGAGGGGAGAAGTTGTCACCTGCTCGCACGAGGTGAACTCTGATCTCTTCTACGCTGCTCTTGGCGGCCTGGGCCAGTTTGGGATCATCACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCAAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGAAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCA TCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAAC AAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGGTCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAATTGTAGCGAAAATATCCTTTGTAAAGACGAAATCTACGGAAGGTAGCTTAAAGAACACAGCGGGGCAACCAGTAGACTAGAACTCAAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCGAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGTGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTATGTTTGC AAATGTTAAAGAAAAAAACAGCAAA]
[+] EMBL CA766652             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cntACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCNGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCGAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGGGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGGAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCATTCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAACAAAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAGNAAGCAGTGGAAAGCCCACTTCGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BF889461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGACATCCTCAACAACTGGAGGACGTCGTTCAAACCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB620543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGATCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAAATGTAGGGAAAATATCCTTTGTAAAGACGAAATTTACGGAAGGTAGCTTAAAGAACACAGGGGGGCAACCAGTAGACTAGAACTCTAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCAAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGGGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTA GGTTGCGAAATGTAAAGGAAAAAAAC      ]




>consensus_6166#0
TACCTACCTTGGTGGCCTCCTCTCGCTCTCGCTCTCCTTCTCTTCCTGCACCTGTTGCAC
CCCCAACAACTCTCACTCACTGCCAGTGTCAAGCAAGATTATACAGCTTGGTCTCATCTC
TTAATTCCAAGCTTGTTTCACCGACCTGCCAAACTCGATTGATCCACAGATAGATAGTAC
TTCTGGTTGGGATCTTGAGCTTATATAGACCAGGAAGCATGCGGGGAGCCATGAAGCCGT
CGATCGTGCACTGCCTCAAGCTGCTCATGCTGCTGGCGCTCGGCGGGGTCACCATGCACG
TCCCCGACGAGGACGACGTGGTCGCGTCGCTCGGGGCGCTGCGCCTCGACGGCCATTTCA
GCTTCGACGACGCCCACGCCGCCGCCCGGGACTTCGGCAACCGGTGCAGCCTCCTGCCGG
CGGCCGTGCTCCACCCTGGCTCGGTGTCCGACGTCGCCGCCACCGTCAGGCGCGTGTTCC
AGCTGGGCAGGAGCTCGCCGCTCACCGTCGCGGCGCGCGGGCACGGCCACTCGCTCCTCG
GCCAGTCCCAGGCCGCCGGCGGGATCGTCGTCAAGATGGAGTCCCTCGCCGCCGCCGCAG
CCAGGGCGGTGCGGGTGCACGGCGGCGCGTCGCCCCACGTGGACGCCCCGGGCGGCGAGC
TCTGGATCAACGTGCTGCATGAGACGCTCAAGCACGGGCTGGCGCCCAGGTCATGGACCG
ACTACCTCCATCTCACAGTCGGTGGCACCTTGTCGAATGCGGGGGTCAGCGGGCAGGCGT
TCCGGCATGGACCGCAGGTCAGCAATGTCAACCAACTGGAGATTGTGACAGGGAGGGGAG
AAGTTGTCACCTGCTCGCACGAGGTGAACTCTGATCTCTTCTACGCTGCTCTTGGCGGCC
TGGGCCAGTTTGGGATCATCACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGG
TGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGC
TGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAG
GCATCCTCAACAACTGGAGGACGTCGTTCAAGCCACAGGACCCAGTGCAGGCAAGCCAGT
TCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATG
AGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGT
CCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTG
AGCTGAAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGA
TCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATA
GCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACAT
CAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCAT
CATCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAACAAAATAGTGGACT
TCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAGAAGC
AGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACG
GTCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGT
CCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAATTGTA
GCGAAAATATCCTTTGTAAAGACGAAATCTACGGAAGGTAGCTTAAAGAACACAGCGGGG
CAACCAGTAGACTAGAACTCAAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCG
AAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGT
GGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAA
TGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAAC
ACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATG
TGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTATGT
TTGCAAATGTTAAAGAAAAAAACAGCAAA
clustalw multiple alignements is not computed in this case