These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6166#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2309 fasta sequence [TACCTACCTTGGTGGCCTCCTCTCGCTCTCGCTCTCCTTCTCTTCCTGCACCTGTTGCACCCCCAACAACTCTCACTCACTGCCAGTGTCAAGCAAGATTATACAGCTTGGTCTCATCTCTTAATTCCAAGCTTGTTTCACCGACCTGCCAAACTCGATTGATCCACAGATAGATAGTACTTCTGGTTGGGATCTTGAGCTTATATAGACCAGGAAGCATGCGGGGAGCCATGAAGCCGTCGATCGTGCACTGCCTCAAGCTGCTCATGCTGCTGGCGCTCGGCGGGGTCACCATGCACGTCCCCGACGAGGACGACGTGGTCGCGTCGCTCGGGGCGCTGCGCCTCGACGGCCATTTCAGCTTCGACGACGCCCACGCCGCCGCCCGGGACTTCGGCAACCGGTGCAGCCTCCTGCCGGCGGCCGTGCTCCACCCTGGCTCGGTGTCCGACGTCGCCGCCACCGTCAGGCGCGTGTTCCAGCTGGGCAGGAGCTCGCCGCTCACCGTCGCGGCGCGCGGGCACGGCCACTCGCTCCTCGGCCAGTCCCAGGCCGCCGGCGGGATCGTCGTCAAGATGGAGTCCCTCGCCGCCGCCGCAGCCAGGGCGGTGCGGGTGCACGGCGGCGCGTCGCCCCACGTGGACGCCCCGGGCGGCGAGCTCTGGATCAACGTGCTGCATGAGACGCTCAAGCACGGGCTGGCGCCCAGGTCATGGACCGACTACCTCCATCTCACAGTCGGTGGCACCTTGTCGAATGCGGGGGTCAGCGGGCAGGCGTTCCGGCATGGACCGCAGGTCAGCAATGTCAACCAACTGGAGATTGTGACAGGGAGGGGAGAAGTTGTCACCTGCTCGCACGAGGTGAACTCTGATCTCTTCTACGCTGCTCTTGGCGGCCTGGGCCAGTTTGGGATCATCACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCAAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGAAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCA-TCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAAC-AAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG-AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGGTCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAATTGTAGCGAAAATATCCTTTGTAAAGACGAAATCTACGGAAGGTAGCTTAAAGAACACAGCGGGGCAACCAGTAGACTAGAACTCAAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCGAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGTGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTATGTTTGC-AAATGTTAAAGAAAAAAACAGCAAA] [+] EMBL AK121317 [TACCTACCTTGGTGGCCTCCTCTCGCTCTCGCTCTCCTTCTCTTCCTGCACCTGTTGCACCCCCAACAACTCTCACTCACTGCCAGTGTCAAGCAAGATTATACAGCTTGGTCTCATCTCTTAATTCCAAGCTTGTTTCACCGACCTGCCAAACTCGATTGATCCACAGATAGATAGTACTTCTGGTTGGGATCTTGAGCTTATATAGACCAGGAAGCATGCGGGGAGCCATGAAGCCGTCGATCGTGCACTGCCTCAAGCTGCTCATGCTGCTGGCGCTCGGCGGGGTCACCATGCACGTCCCCGACGAGGACGACGTGGTCGCGTCGCTCGGGGCGCTGCGCCTCGACGGCCATTTCAGCTTCGACGACGCCCACGCCGCCGCCCGGGACTTCGGCAACCGGTGCAGCCTCCTGCCGGCGGCCGTGCTCCACCCTGGCTCGGTGTCCGACGTCGCCGCCACCGTCAGGCGCGTGTTCCAGCTGGGCAGGAGCTCGCCGCTCACCGTCGCGGCGCGCGGGCACGGCCACTCGCTCCTCGGCCAGTCCCAGGCCGCCGGCGGGATCGTCGTCAAGATGGAGTCCCTCGCCGCCGCCGCAGCCAGGGCGGTGCGGGTGCACGGCGGCGCGTCGCCCCACGTGGACGCCCCGGGCGGCGAGCTCTGGATCAACGTGCTGCATGAGACGCTCAAGCACGGGCTGGCGCCCAGGTCATGGACCGACTACCTCCATCTCACAGTCGGTGGCACCTTGTCGAATGCGGGGGTCAGCGGGCAGGCGTTCCGGCATGGACCGCAGGTCAGCAATGTCAACCAACTGGAGATTGTGACAGGGAGGGGAGAAGTTGTCACCTGCTCGCACGAGGTGAACTCTGATCTCTTCTACGCTGCTCTTGGCGGCCTGGGCCAGTTTGGGATCATCACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCAAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGAAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCA TCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAAC AAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGGTCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAATTGTAGCGAAAATATCCTTTGTAAAGACGAAATCTACGGAAGGTAGCTTAAAGAACACAGCGGGGCAACCAGTAGACTAGAACTCAAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCGAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGTGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTATGTTTGC AAATGTTAAAGAAAAAAACAGCAAA] [+] EMBL CA766652 [ cntACCAGGGCTCGGATTGCTCTTGAACCTGCTCCAAAGATGGTGCGGTGGATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCNGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGGCATCCTCAACAACTGGAGGACGTCGTTCGAGCCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGGGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCGACTCAGATACATATCGTCCACTCTATTCTACACCGATGTCACATACCTGGAGTTCTTGGACAGGGTGCACACTTCTGAGCTGGAGCTGAGGGCTCAAGGCCTCTGGGAAGTCCCACACCCGTGGCTGAATCTTCTGATCCCAAGGAGCACAGTCCACAAATTTGCAAAGGAAGTCTTCGGCAAGATCCTAAAAGATAGCAACAATGGTCCCATACTGCTTTACCCAGTGAACAGAACCAAGTGGGACAACAGAACATCAGTGGTCATACCAGATGAAGAAATTTTCTACCTGGTTGGGTTCCTATCTTCAGCACCATCATTCCTCAGGTCATGGTAGTGTCGAACATGCAATGAACCTGAACAACAAAAATAGTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAGNAAGCAGTGGAAAGCCCACTTCGGAGC ] [+] EMBL BF889461 [ ATACGTGTTCTCTACTCGGACTTTGAGACCTTCACCGAGGACCAGGAGAAGCTGATCGCGTCTGAGAAGACCTTCGACTACATCGAAGGGTTTGTGATCATAAACAGGACAGACATCCTCAACAACTGGAGGACGTCGTTCAAACCACAGGACCCAGTGCAGGCAAGCCAGTTCCAGTCGGATGGAAGAGTGCTATACTGCCTTGAGCTGACGATGAACTTCAACCACGATGAGGCTGACATCATGGAACAGGAAGTTGGTGCGCTGCTATCTCG ] [-] EMBL CB620543 [ GTGGACTTCTGTGAAAAGAATGGTGTTGGGATGAAACAGTATCTAGCACCCTACACTACACAG AAGCAGTGGAAAGCCCACTTCGGAGCAAGGTGGGAGACATTTGAACGGAGGAAACACACGTACGATCCCCTAGCAATCCTAGCTCCAGGGCAGAGAATATTTCCAAAGGCATCACTACCTATGTCCTTGTGACAGTATATGCTGTGAAAAGGCTTTTGTAGAGCATATGTTGTACAAAAATGTAGGGAAAATATCCTTTGTAAAGACGAAATTTACGGAAGGTAGCTTAAAGAACACAGGGGGGCAACCAGTAGACTAGAACTCTAGAAGTAGTGGAAGATACCTCACAAAAGACTTCAAAGCAAAGCAGCGTGGCCTTAACTCTGGTTGCAGCTTTGGAGGCAAATGATTGGAGGATTACAGTGGTCCTAGCAACTGAAGTCCAGCTGTTGTTACAGCATAGAGAAGAGCTGTGCTACCTCAATGATCACTAAATCACTGACTAGTGTAACTCATGTTAAGTTGTTTGTGTTCAGCTAACAACACTGCAGAAGGTAGCATCAGGGTAGACCCTTGATTAGCAAATAACACAGCCTGTTGCATGGGAGTACTATCTGCATAAATGCAGCAGATTACATTAGTTTTTATGAATCGAATGTTA GGTTGCGAAATGTAAAGGAAAAAAAC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||