cluster # 6185

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Oryza sativa
cluster # 6185 cluster # 6185 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6185#0 length = 2879 sequences # 2

consensus_6185#1 length = 951 sequences # 2

consensusID : consensus_6185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2879
fasta sequence

                              [CAAAACGTCCGAACACACACTAGACCTCCACAGCTCGAGCGAGCCCGACGCGGCGCGGCGCGGCGCGCGTGGGGGCGGAGGAACCGGGAGCTCGGGCCCCGCGCCGCCCTCGGCCTCGCCGCCGCCGCTTCGATTGCTCACTCGCGCCCCTCGCCGCCACCGCCAACACCGGGAATGCCGTCGTCGCGCGGGCAACGGCCGCCGCCGCTGCAGCTCGCGGTCGCGTGCGGGTTTGTCCACCTCATCTGCCTCGCCGCGGTCGCGGGGGGAGGCGGACCCTGCGAGTTCTCCGTCGCTCGCGGAGGCAAGCTCTACAGCTTCAGCCTCGCGTCGCCGACGACGGCGCACCGCCACGGCGTCCTCAGCGAGGACGGGTTTTACAAGGTGGCTGTGAATAATTCAGTGCTCTGGTTCCAGCTGTGCGATCAGATGATATTCAACTTTGACCCGCCAGTTTGTCTTAACTGTGAGGACTGTGGTGGTCCACAAAGGTGTGGTACTCAATGCAGTGCCCTTGTGTCAAATAACCGTGGAGGATATGATGTTTGCACAACTATCGGAAGAGCATCTAAATCTCATATATCTCTAATTGATGATATTAATCCTCAGAAGGGTGTTGTTGTCTAGATGTTCTCATCAAAGTGCTCTATCTCTGTTTACATCTATTGTGATTCAACTGTAGCCCATGTATCGGATCAATTTGTACTATCAGGAAGTTGTGACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGAAATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTACATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATACCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAGGTAAGTTCGCTATGTTTCTGTTTTTGAATTGTTTTTGGTGTTTAAAATTGTCCCTGTTGAGACAACTACAATCGTGCTTTTATAAGATGTTCTTATCCTTATCAAATGTATCGTTATGCCTTGTTCATCCATCTGTCCAGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTCTTGTAGACCATTGAGAAATAGGCATCCAATGGAACTGTACTGCTCACCGTACAGTTGACAAACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATTGCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGTTTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATTGGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTTTTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCACAAGATCACTTCACTACTCTGAATTGCTGTTGCGTGATTGCGTGATGCACTGCTTTGGATGCTGGTGCAGATGCACCGTTCTGATGTGATGGGGTGGTCGAAAATGAGATTTTATTGCTTTCAGTCTAGTAGATACCCTTATTATGGTTCCATGAAATTTTAGTAGTCACTCATTCTTGAGTTTGTACTTTGTACTGTTCTGTTTTGTCCTAGGCAGGGCTTGAACCTTTTTGTTCTGAGTTATATTGAGGGTTTCATATAGAAAGAACCTATCTAGTATGGTCTTTGAATTTGTTGATCTACAGTAACAATTACACACTAATGTGTTGCTGCATAAACTAACCGAAAAAGGCTCATTTCTATGTTGATACCTCAGAACCTTGAGATTTCTTGTAGCTTGCAACAGTTGTGTTGCCGAATATTCTGCTAGGCAGATATCAGAATGGCTGGAGATTTACTGGCGTCCACGAGCTGACAATATCTGCAGCTGACCTAGTAAATTTTACTCTTGTTTGCATACAATTGCTATGAGCTTCTCTCCGCTATTTTTCCATGGATAGCACTGTACTAGTTTGTAGAGGTTTTTCTTTTTTTCTTTTCTTTCTTTCTCTTTTGGGTGTGTGTGTTGGGGAATAACTATTGTGTGCGCTACCAACCAAGGCCCAACTTGGTCACTAGATCTGGGTTGTGTATTGCTGCATATGCTAGCAGTATAGTATTACTCCTCCGTTGTTTTTGGAGGAACATCCGGTAAGCCTCACCTCCCAATGCATTAGCAAGTTGCTACCTGCCAGCAGTATCACTCTGATTAGCCTTCTTTTCTAAAGATCATGTGATTTCAAAGCAACAACTTTTCGGTGTATATAGTAACTAATCGCTGCAAATTTTTATATTGTTGACCTGCAGATCCTTATGTTGGACTTGCCTTTCTTCCGTCCACTTGCACAAGGCAGATGGAGGTTGTACAGCTATTATTATTTCAAGAGAAGTTAGCGTCGTGGTGACAACTGGGCAATTAATTTTTCGTTAGAAATCAACGGATAGCCAGGTCCAAACACCATAATAAAATCAGCA]

[+] EMBL AK067332             [CAAAACGTCCGAACACACACTAGACCTCCACAGCTCGAGCGAGCCCGACGCGGCGCGGCGCGGCGCGCGTGGGGGCGGAGGAACCGGGAGCTCGGGCCCCGCGCCGCCCTCGGCCTCGCCGCCGCCGCTTCGATTGCTCACTCGCGCCCCTCGCCGCCACCGCCAACACCGGGAATGCCGTCGTCGCGCGGGCAACGGCCGCCGCCGCTGCAGCTCGCGGTCGCGTGCGGGTTTGTCCACCTCATCTGCCTCGCCGCGGTCGCGGGGGGAGGCGGACCCTGCGAGTTCTCCGTCGCTCGCGGAGGCAAGCTCTACAGCTTCAGCCTCGCGTCGCCGACGACGGCGCACCGCCACGGCGTCCTCAGCGAGGACGGGTTTTACAAGGTGGCTGTGAATAATTCAGTGCTCTGGTTCCAGCTGTGCGATCAGATGATATTCAACTTTGACCCGCCAGTTTGTCTTAACTGTGAGGACTGTGGTGGTCCACAAAGGTGTGGTACTCAATGCAGTGCCCTTGTGTCAAATAACCGTGGAGGATATGATGTTTGCACAACTATCGGAAGAGCATCTAAATCTCATATATCTCTAATTGATGATATTAATCCTCAGAAGGGTGTTGTTGTCTAGATGTTCTCATCAAAGTGCTCTATCTCTGTTTACATCTATTGTGATTCAACTGTAGCCCATGTATCGGATCAATTTGTACTATCAGGAAGTTGTGACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGAAATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTACATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATACCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAGGTAAGTTCGCTATGTTTCTGTTTTTGAATTGTTTTTGGTGTTTAAAATTGTCCCTGTTGAGACAACTACAATCGTGCTTTTATAAGATGTTCTTATCCTTATCAAATGTATCGTTATGCCTTGTTCATCCATCTGTCCAGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTCTTGTAGACCATTGAGAAATAGGCATCCAATGGAACTGTACTGCTCACCGTACAGTTGACAAACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATTGCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGTTTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATTGGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTTTTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCACAAGATCACTTCACTACTCTGAATTGCTGTTGCGTGATTGCGTGATGCACTGCTTTGGATGCTGGTGCAGATGCACCGTTCTGATGTGATGGGGTGGTCGAAAATGAGATTTTATTGCTTTCAGTCTAGTAGATACCCTTATTATGGTTCCATGAAATTTTAGTAGTCACTCATTCTTGAGTTTGTACTTTGTACTGTTCTGTTTTGTCCTAGGCAGGGCTTGAACCTTTTTGTTCTGAGTTATATTGAGGGTTTCATATAGAAAGAACCTATCTAGTATGGTCTTTGAATTTGTTGATCTACAGTAACAATTACACACTAATGTGTTGCTGCATAAACTAACCGAAAAAGGCTCATTTCTATGTTGATACCTCAGAACCTTGAGATTTCTTGTAGCTTGCAACAGTTGTGTTGCCGAATATTCTGCTAGGCAGATATCAGAATGGCTGGAGATTTACTGGCGTCCACGAGCTGACAATATCTGCAGCTGACCTAGTAAATTTTACTCTTGTTTGCATACAATTGCTATGAGCTTCTCTCCGCTATTTTTCCATGGATAGCACTGTACTAGTTTGTAGAGGTTTTTCTTTTTTTCTTTTCTTTCTTTCTCTTTTGGGTGTGTGTGTTGGGGAATAACTATTGTGTGCGCTACCAACCAAGGCCCAACTTGGTCACTAGATCTGGGTTGTGTATTGCTGCATATGCTAGCAGTATAGTATTACTCCTCCGTTGTTTTTGGAGGAACATCCGGTAAGCCTCACCTCCCAATGCATTAGCAAGTTGCTACCTGCCAGCAGTATCACTCTGATTAGCCTTCTTTTCTAAAGATCATGTGATTTCAAAGCAACAACTTTTCGGTGTATATAGTAACTAATCGCTGCAAATTTTTATATTGTTGACCTGCAGATCCTTATGTTGGACTTGCCTTTCTTCCGTCCACTTGCACAAGGCAGATGGAGGTTGTACAGCTATTATTATTTCAAGAGAAGTTAGCGTCGTGGTGACAACTGGGCAATTAATTTTTCGTTAGAAATCAACGGATAGCCAGGTCCAAACACCATAATAAAATCAGCA]
[+] EMBL AK121470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCACACACTTTTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCACAAGATCACTTCACTACTCTGAATTGCTGTTGCGTGATTGCGTGATGCACTGCTTTGGATGCTGGTGCAGATGCACCGTTCTGATGTGATGGGGTGGTCGAAAATGAGATTTTATTGCTTTCAGTCTAGTAGATACCCTTATTATGGTTCCATGAAATTTTAGTAGTCACTCATTCTTGAGTTTGTACTTTGTACTGTTCTGTTTTGTCCTAGGCAGGGCTTGAACCTTTTTGTTCTGAGTTATATTGAGGGTTTCATATAGAAAGAACCTATCTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_6185#0
CAAAACGTCCGAACACACACTAGACCTCCACAGCTCGAGCGAGCCCGACGCGGCGCGGCG
CGGCGCGCGTGGGGGCGGAGGAACCGGGAGCTCGGGCCCCGCGCCGCCCTCGGCCTCGCC
GCCGCCGCTTCGATTGCTCACTCGCGCCCCTCGCCGCCACCGCCAACACCGGGAATGCCG
TCGTCGCGCGGGCAACGGCCGCCGCCGCTGCAGCTCGCGGTCGCGTGCGGGTTTGTCCAC
CTCATCTGCCTCGCCGCGGTCGCGGGGGGAGGCGGACCCTGCGAGTTCTCCGTCGCTCGC
GGAGGCAAGCTCTACAGCTTCAGCCTCGCGTCGCCGACGACGGCGCACCGCCACGGCGTC
CTCAGCGAGGACGGGTTTTACAAGGTGGCTGTGAATAATTCAGTGCTCTGGTTCCAGCTG
TGCGATCAGATGATATTCAACTTTGACCCGCCAGTTTGTCTTAACTGTGAGGACTGTGGT
GGTCCACAAAGGTGTGGTACTCAATGCAGTGCCCTTGTGTCAAATAACCGTGGAGGATAT
GATGTTTGCACAACTATCGGAAGAGCATCTAAATCTCATATATCTCTAATTGATGATATT
AATCCTCAGAAGGGTGTTGTTGTCTAGATGTTCTCATCAAAGTGCTCTATCTCTGTTTAC
ATCTATTGTGATTCAACTGTAGCCCATGTATCGGATCAATTTGTACTATCAGGAAGTTGT
GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGA
AATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTAC
ATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATA
CCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAGGTAAGTTCGCTATGTTTC
TGTTTTTGAATTGTTTTTGGTGTTTAAAATTGTCCCTGTTGAGACAACTACAATCGTGCT
TTTATAAGATGTTCTTATCCTTATCAAATGTATCGTTATGCCTTGTTCATCCATCTGTCC
AGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTC
TTGTAGACCATTGAGAAATAGGCATCCAATGGAACTGTACTGCTCACCGTACAGTTGACA
AACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATT
GCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGT
TTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATT
GGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTT
TTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAG
GACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAG
TAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAG
CTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTT
TTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATA
AAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAAC
ACTCACAAGATCACTTCACTACTCTGAATTGCTGTTGCGTGATTGCGTGATGCACTGCTT
TGGATGCTGGTGCAGATGCACCGTTCTGATGTGATGGGGTGGTCGAAAATGAGATTTTAT
TGCTTTCAGTCTAGTAGATACCCTTATTATGGTTCCATGAAATTTTAGTAGTCACTCATT
CTTGAGTTTGTACTTTGTACTGTTCTGTTTTGTCCTAGGCAGGGCTTGAACCTTTTTGTT
CTGAGTTATATTGAGGGTTTCATATAGAAAGAACCTATCTAGTATGGTCTTTGAATTTGT
TGATCTACAGTAACAATTACACACTAATGTGTTGCTGCATAAACTAACCGAAAAAGGCTC
ATTTCTATGTTGATACCTCAGAACCTTGAGATTTCTTGTAGCTTGCAACAGTTGTGTTGC
CGAATATTCTGCTAGGCAGATATCAGAATGGCTGGAGATTTACTGGCGTCCACGAGCTGA
CAATATCTGCAGCTGACCTAGTAAATTTTACTCTTGTTTGCATACAATTGCTATGAGCTT
CTCTCCGCTATTTTTCCATGGATAGCACTGTACTAGTTTGTAGAGGTTTTTCTTTTTTTC
TTTTCTTTCTTTCTCTTTTGGGTGTGTGTGTTGGGGAATAACTATTGTGTGCGCTACCAA
CCAAGGCCCAACTTGGTCACTAGATCTGGGTTGTGTATTGCTGCATATGCTAGCAGTATA
GTATTACTCCTCCGTTGTTTTTGGAGGAACATCCGGTAAGCCTCACCTCCCAATGCATTA
GCAAGTTGCTACCTGCCAGCAGTATCACTCTGATTAGCCTTCTTTTCTAAAGATCATGTG
ATTTCAAAGCAACAACTTTTCGGTGTATATAGTAACTAATCGCTGCAAATTTTTATATTG
TTGACCTGCAGATCCTTATGTTGGACTTGCCTTTCTTCCGTCCACTTGCACAAGGCAGAT
GGAGGTTGTACAGCTATTATTATTTCAAGAGAAGTTAGCGTCGTGGTGACAACTGGGCAA
TTAATTTTTCGTTAGAAATCAACGGATAGCCAGGTCCAAACACCATAATAAAATCAGCA

consensusID : consensus_6185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 951
fasta sequence

                              [GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGAAATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTACATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGG-CCATACCAAACCTGGAATTTT-GGATCAGCTTG-CCACAAACTATAAAGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATAT-GCTCCTGTAGACCATT-GAGAAATAGGCATCCAATGGACCTGTACTGCTCACCGTACAGTTGAC-AACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATTGCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGTTTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATTGGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTTTTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCAAAAAAAA]

[+] EMBL OS07262A             [GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGAAATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTACATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGG CCATACCAAACCTGGAATTTT GGATCAGCTTG CCACAAACTATAAAGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATAT GCTCCTGTAGACCATT GAGAAATAGGCATCCAATGGACCTGTACTGCTCACCGTACAGTTGAC AACATATATGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C98114               [                                                                                                                              ATTGGTTCAATCTATAGATATTATTCCCTTGGCATNCATTCTGTAGAGGCCCATNCCAAACCTGGAATTTTGGGATCAGCTTGCCCACAAACT TTAAGGGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGGCCCCTGTAGACCATTGGGGAAATAGGCATCCAATGGAACTGTACTGCTCACCGTACAGTTGACAAACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATTGCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGTTTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATTGGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTTTTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCAAAAAAAA]




>consensus_6185#1
GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGA
AATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTAC
ATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATA
CCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAGAGCATGTTATTACCTGCA
GCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTCCTGTAGACCATTGAGAAATA
GGCATCCAATGGACCTGTACTGCTCACCGTACAGTTGACAACATATATGGACTGGGAAGG
AGAAATTTTTATATGCCATTATGTCAGGAAGATGACATTGCAATCTTCATCAACAATCAT
TTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGTTTTTTACAGTTGTGGGCAACT
GCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATTGGGACCTCCAATGGCTTGTTA
TAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTTTTGCCTTGGCCACAACTTTTT
GGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAGGACGGATGAATCACTCTTGTG
AGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAGTAGTGGACCAGATTATCAGAG
AAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAGCTTGGAAAGTGATGCAATTAT
TTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTTTTTTTATCCTTGTTTTATTGT
CTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATAAAGATGCTTGCTTCTACTATT
GTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAACACTCAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6185#0      CAAAACGTCCGAACACACACTAGACCTCCACAGCTCGAGCGAGCCCGACGCGGCGCGGCG 60
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CGGCGCGCGTGGGGGCGGAGGAACCGGGAGCTCGGGCCCCGCGCCGCCCTCGGCCTCGCC 120
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GCCGCCGCTTCGATTGCTCACTCGCGCCCCTCGCCGCCACCGCCAACACCGGGAATGCCG 180
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TCGTCGCGCGGGCAACGGCCGCCGCCGCTGCAGCTCGCGGTCGCGTGCGGGTTTGTCCAC 240
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CTCATCTGCCTCGCCGCGGTCGCGGGGGGAGGCGGACCCTGCGAGTTCTCCGTCGCTCGC 300
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GGAGGCAAGCTCTACAGCTTCAGCCTCGCGTCGCCGACGACGGCGCACCGCCACGGCGTC 360
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CTCAGCGAGGACGGGTTTTACAAGGTGGCTGTGAATAATTCAGTGCTCTGGTTCCAGCTG 420
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TGCGATCAGATGATATTCAACTTTGACCCGCCAGTTTGTCTTAACTGTGAGGACTGTGGT 480
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GGTCCACAAAGGTGTGGTACTCAATGCAGTGCCCTTGTGTCAAATAACCGTGGAGGATAT 540
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GATGTTTGCACAACTATCGGAAGAGCATCTAAATCTCATATATCTCTAATTGATGATATT 600
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      AATCCTCAGAAGGGTGTTGTTGTCTAGATGTTCTCATCAAAGTGCTCTATCTCTGTTTAC 660
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      ATCTATTGTGATTCAACTGTAGCCCATGTATCGGATCAATTTGTACTATCAGGAAGTTGT 720
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGA 780
consensus_6185#1      GACTATGCTACAACACTTAGACATCCTTCTGGTTGTGCACAATCCATGTCTGCTTCTGGA 60
                      ************************************************************

consensus_6185#0      AATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTAC 840
consensus_6185#1      AATGGATGGGGCTGGTTAGCCACTTCATTTGTAACAATTCTGTGCCTTCTCGGAGGGTAC 120
                      ************************************************************

consensus_6185#0      ATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATA 900
consensus_6185#1      ATTTTGATTGGTTCAATCTATAGATATTATTTCCTTGGCATTCATTCTGTAGAGGCCATA 180
                      ************************************************************

consensus_6185#0      CCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAGGTAAGTTCGCTATGTTTC 960
consensus_6185#1      CCAAACCTGGAATTTTGGATCAGCTTGCCACAAACTATAAAG------------------ 222
                      ******************************************                  

consensus_6185#0      TGTTTTTGAATTGTTTTTGGTGTTTAAAATTGTCCCTGTTGAGACAACTACAATCGTGCT 1020
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TTTATAAGATGTTCTTATCCTTATCAAATGTATCGTTATGCCTTGTTCATCCATCTGTCC 1080
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      AGAGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTC 1140
consensus_6185#1      --AGCATGTTATTACCTGCAGCACGAGGTCGTAACAGACAGAGTAGAGATACATATGCTC 280
                        **********************************************************

consensus_6185#0      TTGTAGACCATTGAGAAATAGGCATCCAATGGAACTGTACTGCTCACCGTACAGTTGACA 1200
consensus_6185#1      CTGTAGACCATTGAGAAATAGGCATCCAATGGACCTGTACTGCTCACCGTACAGTTGACA 340
                       ******************************** **************************

consensus_6185#0      AACATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATT 1260
consensus_6185#1      A-CATATATGGACTGGGAAGGAGAAATTTTTATATGCCATTATGTCAGGAAGATGACATT 399
                      * **********************************************************

consensus_6185#0      GCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGT 1320
consensus_6185#1      GCAATCTTCATCAACAATCATTTTGTTCAGAGGAATTTATACAGATATGTAGCAGTACGT 459
                      ************************************************************

consensus_6185#0      TTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATT 1380
consensus_6185#1      TTTTTACAGTTGTGGGCAACTGCTTGTGCTGTACGCGTGGGCAAGAGAAAAGATAAGATT 519
                      ************************************************************

consensus_6185#0      GGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTT 1440
consensus_6185#1      GGGACCTCCAATGGCTTGTTATAAATTTGTTCTATTATAACGTGTGGAAGCCACACACTT 579
                      ************************************************************

consensus_6185#0      TTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAG 1500
consensus_6185#1      TTGCCTTGGCCACAACTTTTTGGCAGATAAATTGTGAAGTCTAGAAATCAGTGCATAGAG 639
                      ************************************************************

consensus_6185#0      GACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAG 1560
consensus_6185#1      GACGGATGAATCACTCTTGTGAGGACATAGTGAAGTAGCATGATGTGACTGTATTCTCAG 699
                      ************************************************************

consensus_6185#0      TAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAG 1620
consensus_6185#1      TAGTGGACCAGATTATCAGAGAAGGATGGTAATTTTCTTCCTTCCTTGTCATTCCTTTAG 759
                      ************************************************************

consensus_6185#0      CTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTT 1680
consensus_6185#1      CTTGGAAAGTGATGCAATTATTTTTCATGAACTAGCACAATAAGGAATCTTTTTTAAGTT 819
                      ************************************************************

consensus_6185#0      TTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATA 1740
consensus_6185#1      TTTTTATCCTTGTTTTATTGTCTATCTTTCAAGCTTGGAGCTTGCCTTTTCGTTTAGATA 879
                      ************************************************************

consensus_6185#0      AAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAAC 1800
consensus_6185#1      AAGATGCTTGCTTCTACTATTGTGATATTTGTGCATTGGTTGTTTTCAGAATATATGAAC 939
                      ************************************************************

consensus_6185#0      ACTCACAAGATCACTTCACTACTCTGAATTGCTGTTGCGTGATTGCGTGATGCACTGCTT 1860
consensus_6185#1      ACTCAAAAAAAA------------------------------------------------ 951
                      ***** ** *                                                  

consensus_6185#0      TGGATGCTGGTGCAGATGCACCGTTCTGATGTGATGGGGTGGTCGAAAATGAGATTTTAT 1920
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TGCTTTCAGTCTAGTAGATACCCTTATTATGGTTCCATGAAATTTTAGTAGTCACTCATT 1980
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CTTGAGTTTGTACTTTGTACTGTTCTGTTTTGTCCTAGGCAGGGCTTGAACCTTTTTGTT 2040
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CTGAGTTATATTGAGGGTTTCATATAGAAAGAACCTATCTAGTATGGTCTTTGAATTTGT 2100
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TGATCTACAGTAACAATTACACACTAATGTGTTGCTGCATAAACTAACCGAAAAAGGCTC 2160
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      ATTTCTATGTTGATACCTCAGAACCTTGAGATTTCTTGTAGCTTGCAACAGTTGTGTTGC 2220
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CGAATATTCTGCTAGGCAGATATCAGAATGGCTGGAGATTTACTGGCGTCCACGAGCTGA 2280
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CAATATCTGCAGCTGACCTAGTAAATTTTACTCTTGTTTGCATACAATTGCTATGAGCTT 2340
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CTCTCCGCTATTTTTCCATGGATAGCACTGTACTAGTTTGTAGAGGTTTTTCTTTTTTTC 2400
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TTTTCTTTCTTTCTCTTTTGGGTGTGTGTGTTGGGGAATAACTATTGTGTGCGCTACCAA 2460
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      CCAAGGCCCAACTTGGTCACTAGATCTGGGTTGTGTATTGCTGCATATGCTAGCAGTATA 2520
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GTATTACTCCTCCGTTGTTTTTGGAGGAACATCCGGTAAGCCTCACCTCCCAATGCATTA 2580
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GCAAGTTGCTACCTGCCAGCAGTATCACTCTGATTAGCCTTCTTTTCTAAAGATCATGTG 2640
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      ATTTCAAAGCAACAACTTTTCGGTGTATATAGTAACTAATCGCTGCAAATTTTTATATTG 2700
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TTGACCTGCAGATCCTTATGTTGGACTTGCCTTTCTTCCGTCCACTTGCACAAGGCAGAT 2760
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      GGAGGTTGTACAGCTATTATTATTTCAAGAGAAGTTAGCGTCGTGGTGACAACTGGGCAA 2820
consensus_6185#1      ------------------------------------------------------------
                                                                                  

consensus_6185#0      TTAATTTTTCGTTAGAAATCAACGGATAGCCAGGTCCAAACACCATAATAAAATCAGCA 2879
consensus_6185#1      -----------------------------------------------------------