|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6187#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1896 fasta sequence
[TTTTTTTTACACCACCACGGCGCCACGCGCGCGCATCATTACACATCACGTNCATGGGCATATNGCGTGTCATTACATCAAGCAGATCAAGCNGCTGGAGCTAATTAATGGNGCATNTTGCACGGTCTTNGTGCNNTGGTTTCAGCAGATCGAAGACCGTTGGAAATGCACCACATCACGCTGGGNTCTCTGTTAATAACCTCTCCCAACCATGAACTACGTANACCATGTAGATAGTTAACAANCTGAGGCGACAGACACGCTATNAATAGCGCTGGTAACAAGTACACTAGTAATATAGCTAGTGGTTAACACGATTAAGAAGTATGGCGTGCATGGTGGCGTCGCGTTGAAACTTGGCTAGAACTGGCAGGGGGACGGCGGGGAGAAGAGGCCGTTGCGAGTCCAGAGGTCGGCGAAGGCGTGGAGGATGAGAGGGTGGTGGCGCGGCGAGTTGAGGGAGAGGAACTGATGGAGGAGGTCGTTGAGGTCGTCCCACGCGTAGATCTCCTTCTCCACCACCATCTGCACCATCGACTCCCGGAAGTCCTCGTACGGCTCCGCCGACTCCACCGCCACAGCCACGCTCTCCTTCGCCACGCGCCGGTACGGCGCCTGCTCCTGCAGCTGCTGCTGCTCGTCGTCGTGGCCGCCGACATCGCCGCCCCGAGCGAAGGAGGTGGCGCCGGCCCGCCTCCGCCGCCGACGCTGCTGCCTCCGCCTCCGCCTCGTCTCCAGCTGCTCCTGCTCCTGCTGCGCCGCCGCCGGCTCCTCGAACAGCGAGTTGGTGGTGAACGACGCGGGGCCCCACGAGGAGTCGGTGGAGGTGGCCGTGCCGGCGCCCCCGGTCGTGGCCGTGAACGCCGTGGTCGTCGACGTGGAGGAGGCGTTGGGCGACTTGGGCTTGCTACCGCCGCGGCGGAACGACGAGGACGACGACGAGGAGAAGATGGAGAACAGCTTCGGCCGGCGGCAGTTGCAGCCGATGTCCACCACCGGCGGCTGCCGCAGCGAGAAGCTGCCCCTCCTTGACGACCTGCCCGACATGGACAATGCCACTGGTGTACCTCTAAGCTCAATAGCCTTGCACTCCTGCACTCACTGCAGAAGCCAATGCAGCTCAGCTCAGCTAAGCCAGTGAGAGCGACGTGTGCGCGGCGAGACAGTGAGAGCTAAGCTCGGAGAGAGTGAGTTGAGTTCTTGGAGCTTGGAGCTGGAAGAGGAGCTAGCTAGTGGTGCTATATATTAATGGGGCGCCATGTGAGAGCGCGAGGCAACGATTAAATGGCGAGTAAAGATAGAGCGACATGAACAGTGAGAAGGGAGAAGAGAGCGAGCATGTGAAGCGGATAATTAGAGGTGTAAGGGCAAGTGTGTGGGTAAAATAAGCTCGGACAGTGCAAGAGGAAAGCAGAAACCTGAGAAAGATATGTGAACAACATGTACAGCACAGTCCAGTGCGGCTCAGTGCTACACACTGCTACTAGTTATACGGAGTATGTGTGTGTGGGGGGTGTATGGGTGAATGGTTTTCATGGCATTTCATGGCTTCATGCATGGGTGCAAAGATGTTCAGATTGGATCCCTGGGGGGATCATGTCAGAGGGGAGAGTTGCAGATGTAAGCCCTGTAAGCATAGCATGCATGCATATATGGCTGGTGTGACTGCACGAGGTGGTTAATTTTTGTGCAGTAAATTCTGAGCTGGAGTGTACACCGTAGGGGAGAGGGAGAAGATGACTGATGATATATTGAGATGGTGTGGTGTGTGGATGGAGTATATTTTTTTTCTTTGCCACGGTTCGTAATAGGACGGGAGTCCCCTGTTGGGGTTGACTAACTGTTCATGTGAGGACAAGCTGGCCATGCTGCTGGCTCAGCTCATGCTAGCTTTCT]
[-] EMBL AU100798 [TTTTTTTTACACCACCACGGCGCCACGCGCGCGCATCATTACACATCACGTNCATGGGCATATNGCGTGTCATTACATCAAGCAGATCAAGCNGCTGGAGCTAATTAATGGNGCATNTTGCACGGTCTTNGTGCNNTGGTTTCAGCAGATCGAAGACCGTTGGAAATGCACCACATCACGCTGGGNTCTCTGTTAATAACCTCTCCCAACCATGAACTACGTANACCATGTAGATAGTTAACAANCTGAGGCGACAGACACGCTATNAATAGCGCTGGTAACAAGTACACTAGTAATATAGCTAGTGGTTA ]
[-] EMBL AK106759 [ TACACCACCACGGCGCCACGCGCGCGCATCATTACACATCACGTACATGGGCATATGGCGTGTCATTACATCAAGCAGATCAAGCTGCTGGAGCTAATTAATGGTGCATTTTGCACGGTCTTTGTGCTTTGGTTTCAGCAGATCGAAGACCGTTGGAAATGCACCACATCACGCTGGGATCTCTGTTAATAACCTCTCCCAACCATGAACTACGTACACCATGTAGATAGTTAACAAACTGAGGCGACAGACACGCTATCAATAGCGCTGGTAACAAGTACACTAGTAATATAGCTAGTGGTTAACACGATTAAGAAGTATGGCGTGCATGGTGGCGTCGCGTTGAAACTTGGCTAGAACTGGCAGGGGGACGGCGGGGAGAAGAGGCCGTTGCGAGTCCAGAGGTCGGCGAAGGCGTGGAGGATGAGAGGGTGGTGGCGCGGCGAGTTGAGGGAGAGGAACTGATGGAGGAGGTCGTTGAGGTCGTCCCACGCGTAGATCTCCTTCTCCACCACCATCTGCACCATCGACTCCCGGAAGTCCTCGTACGGCTCCGCCGACTCCACCGCCACAGCCACGCTCTCCTTCGCCACGCGCCGGTACGGCGCCTGCTCCTGCAGCTGCTGCTGCTCGTCGTCGTGGCCGCCGACATCGCCGCCCCGAGCGAAGGAGGTGGCGCCGGCCCGCCTCCGCCGCCGACGCTGCTGCCTCCGCCTCCGCCTCGTCTCCAGCTGCTCCTGCTCCTGCTGCGCCGCCGCCGGCTCCTCGAACAGCGAGTTGGTGGTGAACGACGCGGGGCCCCACGAGGAGTCGGTGGAGGTGGCCGTGCCGGCGCCCCCGGTCGTGGCCGTGAACGCCGTGGTCGTCGACGTGGAGGAGGCGTTGGGCGACTTGGGCTTGCTACCGCCGCGGCGGAACGACGAGGACGACGACGAGGAGAAGATGGAGAACAGCTTCGGCCGGCGGCAGTTGCAGCCGATGTCCACCACCGGCGGCTGCCGCAGCGAGAAGCTGCCCCTCCTTGACGACCTGCCCGACATGGACAATGCCACTGGTGTACCTCTAAGCTCAATAGCCTTGCACTCCTGCACTCACTGCAGAAGCCAATGCAGCTCAGCTCAGCTAAGCCAGTGAGAGCGACGTGTGCGCGGCGAGACAGTGAGAGCTAAGCTCGGAGAGAGTGAGTTGAGTTCTTGGAGC ]
[+] EMBL AK064616 [ GCTGGTAACAAGTACACTAGTAATATAGCTAGTGGTTAACACGATTAAGAAGTATGGCGTGCATGGTGGCGTCGCGTTGAAACTTGGCTAGAACTGGCAGGGGGACGGCGGGGAGAAGAGGCCGTTGCGAGTCCAGAGGTCGGCGAAGGCGTGGAGGATGAGAGGGTGGTGGCGCGGCGAGTTGAGGGAGAGGAACTGATGGAGGAGGTCGTTGAGGTCGTCCCACGCGTAGATCTCCTTCTCCACCACCATCTGCACCATCGACTCCCGGAAGTCCTCGTACGGCTCCGCCGACTCCACCGCCACAGCCACGCTCTCCTTCGCCACGCGCCGGTACGGCGCCTGCTCCTGCAGCTGCTGCTGCTCGTCGTCGTGGCCGCCGACATCGCCGCCCCGAGCGAAGGAGGTGGCGCCGGCCCGCCTCCGCCGCCGACGCTGCTGCCTCCGCCTCCGCCTCGTCTCCAGCTGCTCCTGCTCCTGCTGCGCCGCCGCCGGCTCCTCGAACAGCGAGTTGGTGGTGAACGACGCGGGGCCCCACGAGGAGTCGGTGGAGGTGGCCGTGCCGGCGCCCCCGGTCGTGGCCGTGAACGCCGTGGTCGTCGACGTGGAGGAGGCGTTGGGCGACTTGGGCTTGCTACCGCCGCGGCGGAACGACGAGGACGACGACGAGGAGAAGATGGAGAACAGCTTCGGCCGGCGGCAGTTGCAGCCGATGTCCACCACCGGCGGCTGCCGCAGCGAGAAGCTGCCCCTCCTTGACGACCTGCCCGACATGGACAATGCCACTGGTGTACCTCTAAGCTCAATAGCCTTGCACTCCTGCACTCACTGCAGAAGCCAATGCAGCTCAGCTCAGCTAAGCCAGTGAGAGCGACGTGTGCGCGGCGAGACAGTGAGAGCTAAGCTCGGAGAGAGTGAGTTGAGTTCTTGGAGCTTGGAGCTGGAAGAGGAGCTAGCTAGTGGTGCTATATATTAATGGGGCGCCATGTGAGAGCGCGAGGCAACGATTAAATGGCGAGTAAAGATAGAGCGACATGAACAGTGAGAAGGGAGAAGAGAGCGAGCATGTGAAGCGGATAATTAGAGGTGTAAGGGCAAGTGTGTGGGTAAAATAAGCTCGGACAGTGCAAGAGGAAAGCAGAAACCTGAGAAAGATATGTGAACAACATGTACAGCACAGTCCAGTGCGGCTCAGTGCTACACACTGCTACTAGTTATACGGAGTATGTGTGTGTGGGGGGTGTATGGGTGAATGGTTTTCATGGCATTTCATGGCTTCATGCATGGGTGCAAAGATGTTCAGATTGGATCCCTGGGGGGATCATGTCAGAGGGGAGAGTTGCAGATGTAAGCCCTGTAAGCATAGCATGCATGCATATATGGCTGGTGTGACTGCACGAGGTGGTTAATTTTTGTGCAGTAAATTCTGAGCTGGAGTGTACACCGTAGGGGAGAGGGAGAAGATGACTGATGATATATTGAGATGGTGTGGTGTGTGGATGGAGTATATTTTTTTTCTTTGCCACGGTTCGTAATAGGACGGGAGTCCCCTGTTGGGGTTGACTAACTGTTCATGTGAGGACAAGCTGGCCATGCTGCTGGCTCAGCTCATGCTAGCTTTCT]
[-] EMBL C27174 [ CCGGCGCCCCCGGTCGTGNCCGTGAACGCCGTGGTCGTCGACGTGGAGNAGGCGTTGGGCNACTTGGNCTTGCTACCGCCGCGTCGGAACGACGAGGACGACGACGAGGAGAAGATGGAGAACAGCTTCGNCCGGCGGCAGTTGCAGCCGATGTCCACCACCGGC GNTGCCGCAGCGAGAAGCTGCCCCTCCTTGACGACCTGCCCGACATGGACAATGCCACTGGTGTACCTCTAAGCTCAATAGCCTTGCACTCCTGCACTCACTGCAGAAGCCAATGCAGCTCAGCTCAGCTAAGCCAGTGAGAGCGACGTGTGCGCGGCGAGACAGTGAGAGCTAAGCTCGGA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||