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Oryza sativa
cluster # 6196 cluster # 6196       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6196#0 length = 2012 sequences # 2  
consensus_6196#1 length = 504 sequences # 1  
consensus_6196#2 length = 455 sequences # 1  

consensusID : consensus_6196#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2012
fasta sequence
                              [CATCAAATCCCCAAACCCCTCCTCCTTCTCTCCAAGTCCTCGTCTTGGTTGTCGCAATCATTCGTGGGGCGCGTTAATCCCTCCCCAAATTCTGTGGCAGCCAGCTTCCCCGCTTGCTTGGATTGGATTTCTCCAAGATTGATTCGTTCCCTCCCAATTCTTCACTTCCTCTATCCATTTCCAATCCAATCTTGGTTTTTTGCATTGTTTCCTCCCGATTTGTCTTCCTCTCGCTCTCCCTCTCCCACCATATCTTGGACTCGGTCCTATCTGTCCGTGCCTCGCTTCCATCGCCATTGCTCTTTTGCTGCTAAAGTCTTCTCTTTGGAGGGAGAGACTGGGACTGGGAGCTAGCTCGCCCTTGTGTTGTTCAGGGAGTAAATGCGCGTCCTTGGTGGTGCTTGGTCCCAGCATTTTCCGCCCCAAATCTCGTCCTTGCTGCCCCGACTTAAGTGGTGGAGATTCCGTCACCGGCGGTCGTAGATGAGGAGGAGGAGATCCTCCTCCTGATCTACTCTTCTTCTTCTTCTTCTTCTTCAGCTCCTGGCTGCTGCTGCTCCACTCCCCCTGATCCCCCTGCAGGAGCATGGATTTCTTGGCCTGCGTCTGCCTCCTCCACCTGCTCTTCTTGGCCACTTCCCGGGTGGCGGCGCAGGCGTCGTCGCCGGCCAGGGCCCTGGACGCAATGCTGCAGGACCACGCGTACCGGGCCTTCGTGCACCCGCACACTGGCATTGTCTACAACGCCACCGTCCCGGCCAACCTCACCGGCGTCGCCCTGTCCGCGGTCCGCCTTCGCAGCGGCAGCCTGCGGAGGAAAGGTTTCTCCGACTACTTCGACTTCACCGTCCCCACCGGCATCGTCGTGCAGCCGTACGTCGAGAGGGTGGTGCTCGTCTACCACAATCTCGGCAATTGGTCTGACCACTACTACCCGCTGCCCGGGTACACATACCTCTCGCCGGTGCTCGGGCTGCTTCTCTACGACGCGGCCAACTTGTCGGCGGTGGGGTTGCAGGAGCTGAGCTTTGTCGCCTCCGGGAGCCCAATTTCTATAAATTTCAGTGATGTTAGATCGGTGCCGGCAGGCGGTCCAGCTCCTCGGTGCGTGTGGTTTGATTTGGATGGTGTGCCACAATTCCGGGACTTAGAGGCAAGCAATGTGTGCTCGACGTACCGCCGAGGGCATTTCTCGATAGTGGTGAACTCTAGCGCGATTCCTCCTGGTCCAGTGCCTTCAGGCAACATTACACCGCCAATACCGACTCCTACAGGTCGTTCTAAGGGCAGCTCCAAGGGGTGGAAGATTGCTGTTGGCGTGGTTGGGGGCGTCATAGCATTGGTCCTGTTGGCGTCGCTTGTGGTTTGTTTGGCAAGGTACAAAAGAGATAAGAAATTGGAACTGATGGAACAGAATGCAGAGACTGGGGAGACATTGCGTATGGCACAGGTTGGGAGGTCACAAGCGCCTGTAGCACTGGGGACAAGAACACAACCGGTGATTGAGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCGGAATTCAGGCAAGCATGGGATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGGCATAGTCTTGGCTCATGAGACTTAACACATTCTTTTAACAGTTTTGTTTGGAGGGTTATTTGTTCTGCAATGGCTCATGTTGATGTTCATAATTGCCATGTTCATAGTGAGGAGCTCTTTTCATCTCCAAGCAAGCAATGGGGAAGAAATGGTTGTTGTGTCAGATTTGGAATCCCTTATTTTTTGGATTGCTGTATTCAAAAGGATATGGGCTTGGCAATAAAGGTGAGGGAATTTTATTGTGCATTTCATTTTGCTACTTCAGTGAAATTCGTTCAAGCTTAAGCGATTTCGTTTTTGTGTATTTTGGCTCCTCATGTTTAGAGACCTTGTAAGGTACAATTGTACATGTTTAGTTGTTTAATTGATTTGAT]

[+] EMBL AK121697             [CATCAAATCCCCAAACCCCTCCTCCTTCTCTCCAAGTCCTCGTCTTGGTTGTCGCAATCATTCGTGGGGCGCGTTAATCCCTCCCCAAATTCTGTGGCAGCCAGCTTCCCCGCTTGCTTGGATTGGATTTCTCCAAGATTGATTCGTTCCCTCCCAATTCTTCACTTCCTCTATCCATTTCCAATCCAATCTTGGTTTTTTGCATTGTTTCCTCCCGATTTGTCTTCCTCTCGCTCTCCCTCTCCCACCATATCTTGGACTCGGTCCTATCTGTCCGTGCCTCGCTTCCATCGCCATTGCTCTTTTGCTGCTAAAGTCTTCTCTTTGGAGGGAGAGACTGGGACTGGGAGCTAGCTCGCCCTTGTGTTGTTCAGGGAGTAAATGCGCGTCCTTGGTGGTGCTTGGTCCCAGCATTTTCCGCCCCAAATCTCGTCCTTGCTGCCCCGACTTAAGTGGTGGAGATTCCGTCACCGGCGGTCGTAGATGAGGAGGAGGAGATCCTCCTCCTGATCTACTCTTCTTCTTCTTCTTCTTCTTCAGCTCCTGGCTGCTGCTGCTCCACTCCCCCTGATCCCCCTGCAGGAGCATGGATTTCTTGGCCTGCGTCTGCCTCCTCCACCTGCTCTTCTTGGCCACTTCCCGGGTGGCGGCGCAGGCGTCGTCGCCGGCCAGGGCCCTGGACGCAATGCTGCAGGACCACGCGTACCGGGCCTTCGTGCACCCGCACACTGGCATTGTCTACAACGCCACCGTCCCGGCCAACCTCACCGGCGTCGCCCTGTCCGCGGTCCGCCTTCGCAGCGGCAGCCTGCGGAGGAAAGGTTTCTCCGACTACTTCGACTTCACCGTCCCCACCGGCATCGTCGTGCAGCCGTACGTCGAGAGGGTGGTGCTCGTCTACCACAATCTCGGCAATTGGTCTGACCACTACTACCCGCTGCCCGGGTACACATACCTCTCGCCGGTGCTCGGGCTGCTTCTCTACGACGCGGCCAACTTGTCGGCGGTGGGGTTGCAGGAGCTGAGCTTTGTCGCCTCCGGGAGCCCAATTTCTATAAATTTCAGTGATGTTAGATCGGTGCCGGCAGGCGGTCCAGCTCCTCGGTGCGTGTGGTTTGATTTGGATGGTGTGCCACAATTCCGGGACTTAGAGGCAAGCAATGTGTGCTCGACGTACCGCCGAGGGCATTTCTCGATAGTGGTGAACTCTAGCGCGATTCCTCCTGGTCCAGTGCCTTCAGGCAACATTACACCGCCAATACCGACTCCTACAGGTCGTTCTAAGGGCAGCTCCAAGGGGTGGAAGATTGCTGTTGGCGTGGTTGGGGGCGTCATAGCATTGGTCCTGTTGGCGTCGCTTGTGGTTTGTTTGGCAAGGTACAAAAGAGATAAGAAATTGGAACTGATGGAACAGAATGCAGAGACTGGGGAGACATTGCGTATGGCACAGGTTGGGAGGTCACAAGCGCCTGTAGCACTGGGGACAAGAACACAACCGGTGATTGAGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCGGAATTCAGGCAAGCATGGGATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGGCATAGTCTTGGCTCATGAGACTTAACACATTCTTTTAACAGTTTTGTTTGGAGGGTTATTTGTTCTGCAATGGCTCATGTTGATGTTCATAATTGCCATGTTCATAGTGAGGAGCTCTTTTCATCTCCAAGCAAGCAATGGGGAAGAAATGGTTGTTGTGTCAGATTTGGAATCCCTTATTTTTTGGATTGCTGTATTCAAAAGGATATGGGCTTGGCAATAAAGGTGAGGGAATTTTATTGTGCATTTCATTTTGCTACTTCAGTGAAATTCGTTCAAGCTTAAGCGATTTCGTTTTTGTGTATTTTGGCTCCTCATGTTTAGAGACCTTGTAAGGTACAATTGTACATGTTTAGTTGTTTAATTGATTTGAT]
[+] EMBL AK108947             [          CCAAACCCCTCCTCCTTCTCTCCAAGTCCTCGTCTTGGTTGTCGCAATCATTCGTGGGGCGCGTTAATCCCTCCCCAAATTCTGTGGCAGCCAGCTTCCCCGCTTGCTTGGATTGGATTTCTCCAAGATTGATTCGTTCCCTCCCAATTCTTCACTTCCTCTATCCATTTCCAATCCAATCTTGGTTTTTTGCATTGTTTCCTCCCGATTTGTCTTCCTCTCGCTCTCCCTCTCCCACCATATCTTGGACTCGGTCCTATCTGTCCGTGCCTCGCTTCCATCGCCATTGCTCTTTTGCTGCTAAAGTCTTCTCTTTGGAGGGAGAGACTGGGACTGGGAGCTAGCTCGCCCTTGTGTTGTTCAGGGAGTAAATGCGCGTCCTTGGTGGTGCTTGGTCCCAGCATTTTCCGCCCCAAATCTCGTCCTTGCTGCCCCGACTTAAGTGGTGGAGATTCCGTCACCGGCGGTCGTAGATGAGGAGGAGGAGATCCTCCTCCTGATCTACTCTTCTTCTTCTTCTTCTTCTTCAGCTCCTGGCTGCTGCTGCTCCACTCCCCCTGATCCCCCTGCAGGAGCATGGATTTCTTGGCCTGCGTCTGCCTCCTCCACCTGCTCTTCTTGGCCACTTCCCGGGTGGCGGCGCAGGCGTCGTCGCCGGCCAGGGCCCTGGACGCAATGCTGCAGGACCACGCGTACCGGGCCTTCGTGCACCCGCACACTGGCATTGTCTACAACGCCACCGTCCCGGCCAACCTCACCGGCGTCGCCCTGTCCGCGGTCCGCCTTCGCAGCGGCAGCCTGCGGAGGAAAGGTTTCTCCGACTACTTCGACTTCACCGTCCCCACCGGCATCGTCGTGCAGCCGTACGTCGAGAGGGTGGTGCTCGTCTACCACAATCTCGGCAATTGGTCTGACCACTACTACCCGCTGCCCGGGTACACATACCTCTCGCCGGTGCTCGGGCTGCTTCTCTACGACGCGGCCAACTTGTCGGCGGTGGGGTTGCAGGAGCTGAGCTTTGTCGCCTCCGGGAGCCCAATTTCTATAAATTTCAGTGATGTTAGATCGGTGCCGGCAGGCGGTCCAGCTCCTCGGTGCGTGTGGTTTGATTTGGATGGTGTGCCACAATTCCGGGACTTAGAGGCAAGCAATGTGTGCTCGACGTACCGCCGAGGGCATTTCTCGATAGTGGTGAACTCTAGCGCGATTCCTCCTGGTCCAGTGCCTTCAGGCAACATTACACCGCCAATACCGACTCCTACAGGTCGTTCTAAGGGCAGCTCCAAGGGGTGGAAGATTGCTGTTGGCGTGGTTGGGGGCGTCATAGCATTGGTCCTGTTGGCGTCGCTTGTGGTTTGTTTGGCAAGGTACAAAAGAGATAAGAAATTGGAACTGATGGAACAGAATGCAGAGACTGGGGAGACATTGCGTATGGCACAGGTTGGGAGGTCACAAGCGCCTGTAGCACTGGGGACAAGAACACAACCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_6196#0 CATCAAATCCCCAAACCCCTCCTCCTTCTCTCCAAGTCCTCGTCTTGGTTGTCGCAATCA TTCGTGGGGCGCGTTAATCCCTCCCCAAATTCTGTGGCAGCCAGCTTCCCCGCTTGCTTG GATTGGATTTCTCCAAGATTGATTCGTTCCCTCCCAATTCTTCACTTCCTCTATCCATTT CCAATCCAATCTTGGTTTTTTGCATTGTTTCCTCCCGATTTGTCTTCCTCTCGCTCTCCC TCTCCCACCATATCTTGGACTCGGTCCTATCTGTCCGTGCCTCGCTTCCATCGCCATTGC TCTTTTGCTGCTAAAGTCTTCTCTTTGGAGGGAGAGACTGGGACTGGGAGCTAGCTCGCC CTTGTGTTGTTCAGGGAGTAAATGCGCGTCCTTGGTGGTGCTTGGTCCCAGCATTTTCCG CCCCAAATCTCGTCCTTGCTGCCCCGACTTAAGTGGTGGAGATTCCGTCACCGGCGGTCG TAGATGAGGAGGAGGAGATCCTCCTCCTGATCTACTCTTCTTCTTCTTCTTCTTCTTCAG CTCCTGGCTGCTGCTGCTCCACTCCCCCTGATCCCCCTGCAGGAGCATGGATTTCTTGGC CTGCGTCTGCCTCCTCCACCTGCTCTTCTTGGCCACTTCCCGGGTGGCGGCGCAGGCGTC GTCGCCGGCCAGGGCCCTGGACGCAATGCTGCAGGACCACGCGTACCGGGCCTTCGTGCA CCCGCACACTGGCATTGTCTACAACGCCACCGTCCCGGCCAACCTCACCGGCGTCGCCCT GTCCGCGGTCCGCCTTCGCAGCGGCAGCCTGCGGAGGAAAGGTTTCTCCGACTACTTCGA CTTCACCGTCCCCACCGGCATCGTCGTGCAGCCGTACGTCGAGAGGGTGGTGCTCGTCTA CCACAATCTCGGCAATTGGTCTGACCACTACTACCCGCTGCCCGGGTACACATACCTCTC GCCGGTGCTCGGGCTGCTTCTCTACGACGCGGCCAACTTGTCGGCGGTGGGGTTGCAGGA GCTGAGCTTTGTCGCCTCCGGGAGCCCAATTTCTATAAATTTCAGTGATGTTAGATCGGT GCCGGCAGGCGGTCCAGCTCCTCGGTGCGTGTGGTTTGATTTGGATGGTGTGCCACAATT CCGGGACTTAGAGGCAAGCAATGTGTGCTCGACGTACCGCCGAGGGCATTTCTCGATAGT GGTGAACTCTAGCGCGATTCCTCCTGGTCCAGTGCCTTCAGGCAACATTACACCGCCAAT ACCGACTCCTACAGGTCGTTCTAAGGGCAGCTCCAAGGGGTGGAAGATTGCTGTTGGCGT GGTTGGGGGCGTCATAGCATTGGTCCTGTTGGCGTCGCTTGTGGTTTGTTTGGCAAGGTA CAAAAGAGATAAGAAATTGGAACTGATGGAACAGAATGCAGAGACTGGGGAGACATTGCG TATGGCACAGGTTGGGAGGTCACAAGCGCCTGTAGCACTGGGGACAAGAACACAACCGGT GATTGAGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCGGAATTCAGGCAAG CATGGGATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTCCATATCAATGAGTGCGGCAC AAATTGCTAGATGTAGGGCATAGTCTTGGCTCATGAGACTTAACACATTCTTTTAACAGT TTTGTTTGGAGGGTTATTTGTTCTGCAATGGCTCATGTTGATGTTCATAATTGCCATGTT CATAGTGAGGAGCTCTTTTCATCTCCAAGCAAGCAATGGGGAAGAAATGGTTGTTGTGTC AGATTTGGAATCCCTTATTTTTTGGATTGCTGTATTCAAAAGGATATGGGCTTGGCAATA AAGGTGAGGGAATTTTATTGTGCATTTCATTTTGCTACTTCAGTGAAATTCGTTCAAGCT TAAGCGATTTCGTTTTTGTGTATTTTGGCTCCTCATGTTTAGAGACCTTGTAAGGTACAA TTGTACATGTTTAGTTGTTTAATTGATTTGAT



consensusID : consensus_6196#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 504
fasta sequence
                              [CACAGGTTGGGAGGTCACAAGCGCCTGTGGCACTGGGGACAAGAACACAACCGGTGATTGAGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCAGAATTCAGGCAACAAGGGTAACCGGTTATGCCTGCAAGCATGGAATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGCCATAGTCTTGGCTCATGAGGCTTAACACATTCTTTTAACAGTTTTGTTTGGAGGGTTATTTGTTCTGCATGGCTGTTGTTGATGTTCATAATTGCCATGTTCATAGTGGGGAGCTCTTTTCATCTCCAAGCAAGCATAGGGAAGAAATGGTTGTCGTGTCAGATTTGGAATCCCTTATTTTTTGGATTGTTGTATTCAAAGGATTTGGGCTTGGCAATAAAGGTGAGGGAATTTTATTGCGCATCTGATGGTGCTACTTCAGTGAAATTCATTCAAGCTTCAAAAA]

[+] EMBL BI812351             [CACAGGTTGGGAGGTCACAAGCGCCTGTGGCACTGGGGACAAGAACACAACCGGTGATTGAGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCAGAATTCAGGCAACAAGGGTAACCGGTTATGCCTGCAAGCATGGAATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGCCATAGTCTTGGCTCATGAGGCTTAACACATTCTTTTAACAGTTTTGTTTGGAGGGTTATTTGTTCTGCATGGCTGTTGTTGATGTTCATAATTGCCATGTTCATAGTGGGGAGCTCTTTTCATCTCCAAGCAAGCATAGGGAAGAAATGGTTGTCGTGTCAGATTTGGAATCCCTTATTTTTTGGATTGTTGTATTCAAAGGATTTGGGCTTGGCAATAAAGGTGAGGGAATTTTATTGCGCATCTGATGGTGCTACTTCAGTGAAATTCATTCAAGCTTCAAAAA]


>consensus_6196#1 CACAGGTTGGGAGGTCACAAGCGCCTGTGGCACTGGGGACAAGAACACAACCGGTGATTG AGAGCGAGTATGTTGCATAGATGTTTTCTTGACATTTCAGCAGAATTCAGGCAACAAGGG TAACCGGTTATGCCTGCAAGCATGGAATTGCTCTTCGGTCGGATGAGGCAACAAGTGTTC CATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGCCATAGTCTTGGCTCATGAGGCT TAACACATTCTTTTAACAGTTTTGTTTGGAGGGTTATTTGTTCTGCATGGCTGTTGTTGA TGTTCATAATTGCCATGTTCATAGTGGGGAGCTCTTTTCATCTCCAAGCAAGCATAGGGA AGAAATGGTTGTCGTGTCAGATTTGGAATCCCTTATTTTTTGGATTGTTGTATTCAAAGG ATTTGGGCTTGGCAATAAAGGTGAGGGAATTTTATTGCGCATCTGATGGTGCTACTTCAG TGAAATTCATTCAAGCTTCAAAAA



consensusID : consensus_6196#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 455
fasta sequence
                              [GAGTCACAAGCNNCCTGTAGCACTGGGGACAAGAACACAACCNGTGATTGTAGAGCGAGTATGTTGCATAGAAAGTTTTCCTTGACNTATTCAGCGGAATTCAGGCAAGCATGGGATGTGCTTTTCGGTCGGATGAGGCCAACNAATGTTCCATATCNATGAGTGCGGCNCCAAATGCTAGATGTAGGGCATAATCTTGGCTCATGAGACNTAACACATTCTGTTTAGACCGGTTTGTTTGGAGGGGTATTTGTTNTGCACATGGCTCATGTTGATGTTNATATATTGCCACTGTTCAGTAGTGAGGAGCTCTTTTNATNTCCCAGCCAGCCATGGGGGAGAAATGGTTGGTGTGTCAGACTTTGGAATCCCCTACTTTTTTGGAGTTGCGTGNATTCNAAAGGATATGGGCTTGGCCATAAAGGNGNGGGNATTTTNTTGTGCCAAAAAAAAAA]

[+] EMBL BI806813             [GAGTCACAAGCNNCCTGTAGCACTGGGGACAAGAACACAACCNGTGATTGTAGAGCGAGTATGTTGCATAGAAAGTTTTCCTTGACNTATTCAGCGGAATTCAGGCAAGCATGGGATGTGCTTTTCGGTCGGATGAGGCCAACNAATGTTCCATATCNATGAGTGCGGCNCCAAATGCTAGATGTAGGGCATAATCTTGGCTCATGAGACNTAACACATTCTGTTTAGACCGGTTTGTTTGGAGGGGTATTTGTTNTGCACATGGCTCATGTTGATGTTNATATATTGCCACTGTTCAGTAGTGAGGAGCTCTTTTNATNTCCCAGCCAGCCATGGGGGAGAAATGGTTGGTGTGTCAGACTTTGGAATCCCCTACTTTTTTGGAGTTGCGTGNATTCNAAAGGATATGGGCTTGGCCATAAAGGNGNGGGNATTTTNTTGTGCCAAAAAAAAAA]


>consensus_6196#2 GAGTCACAAGCNNCCTGTAGCACTGGGGACAAGAACACAACCNGTGATTGTAGAGCGAGT ATGTTGCATAGAAAGTTTTCCTTGACNTATTCAGCGGAATTCAGGCAAGCATGGGATGTG CTTTTCGGTCGGATGAGGCCAACNAATGTTCCATATCNATGAGTGCGGCNCCAAATGCTA GATGTAGGGCATAATCTTGGCTCATGAGACNTAACACATTCTGTTTAGACCGGTTTGTTT GGAGGGGTATTTGTTNTGCACATGGCTCATGTTGATGTTNATATATTGCCACTGTTCAGT AGTGAGGAGCTCTTTTNATNTCCCAGCCAGCCATGGGGGAGAAATGGTTGGTGTGTCAGA CTTTGGAATCCCCTACTTTTTTGGAGTTGCGTGNATTCNAAAGGATATGGGCTTGGCCAT AAAGGNGNGGGNATTTTNTTGTGCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6196#0      CATCAAATCCCCAAACCCCTCCTCCTTCTCTCCAAGTCCTCGTCTTGGTTGTCGCAATCA 60
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TTCGTGGGGCGCGTTAATCCCTCCCCAAATTCTGTGGCAGCCAGCTTCCCCGCTTGCTTG 120
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GATTGGATTTCTCCAAGATTGATTCGTTCCCTCCCAATTCTTCACTTCCTCTATCCATTT 180
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CCAATCCAATCTTGGTTTTTTGCATTGTTTCCTCCCGATTTGTCTTCCTCTCGCTCTCCC 240
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TCTCCCACCATATCTTGGACTCGGTCCTATCTGTCCGTGCCTCGCTTCCATCGCCATTGC 300
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TCTTTTGCTGCTAAAGTCTTCTCTTTGGAGGGAGAGACTGGGACTGGGAGCTAGCTCGCC 360
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CTTGTGTTGTTCAGGGAGTAAATGCGCGTCCTTGGTGGTGCTTGGTCCCAGCATTTTCCG 420
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CCCCAAATCTCGTCCTTGCTGCCCCGACTTAAGTGGTGGAGATTCCGTCACCGGCGGTCG 480
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TAGATGAGGAGGAGGAGATCCTCCTCCTGATCTACTCTTCTTCTTCTTCTTCTTCTTCAG 540
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CTCCTGGCTGCTGCTGCTCCACTCCCCCTGATCCCCCTGCAGGAGCATGGATTTCTTGGC 600
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CTGCGTCTGCCTCCTCCACCTGCTCTTCTTGGCCACTTCCCGGGTGGCGGCGCAGGCGTC 660
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GTCGCCGGCCAGGGCCCTGGACGCAATGCTGCAGGACCACGCGTACCGGGCCTTCGTGCA 720
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CCCGCACACTGGCATTGTCTACAACGCCACCGTCCCGGCCAACCTCACCGGCGTCGCCCT 780
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GTCCGCGGTCCGCCTTCGCAGCGGCAGCCTGCGGAGGAAAGGTTTCTCCGACTACTTCGA 840
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CTTCACCGTCCCCACCGGCATCGTCGTGCAGCCGTACGTCGAGAGGGTGGTGCTCGTCTA 900
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CCACAATCTCGGCAATTGGTCTGACCACTACTACCCGCTGCCCGGGTACACATACCTCTC 960
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GCCGGTGCTCGGGCTGCTTCTCTACGACGCGGCCAACTTGTCGGCGGTGGGGTTGCAGGA 1020
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GCTGAGCTTTGTCGCCTCCGGGAGCCCAATTTCTATAAATTTCAGTGATGTTAGATCGGT 1080
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GCCGGCAGGCGGTCCAGCTCCTCGGTGCGTGTGGTTTGATTTGGATGGTGTGCCACAATT 1140
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CCGGGACTTAGAGGCAAGCAATGTGTGCTCGACGTACCGCCGAGGGCATTTCTCGATAGT 1200
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GGTGAACTCTAGCGCGATTCCTCCTGGTCCAGTGCCTTCAGGCAACATTACACCGCCAAT 1260
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      ACCGACTCCTACAGGTCGTTCTAAGGGCAGCTCCAAGGGGTGGAAGATTGCTGTTGGCGT 1320
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      GGTTGGGGGCGTCATAGCATTGGTCCTGTTGGCGTCGCTTGTGGTTTGTTTGGCAAGGTA 1380
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      CAAAAGAGATAAGAAATTGGAACTGATGGAACAGAATGCAGAGACTGGGGAGACATTGCG 1440
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TATGGCACAGGTTGGGAGGTCACAAGCGCC-TGTAGCACTGGGGACAAGAACACAACCGG 1499
consensus_6196#1      -----CACAGGTTGGGAGGTCACAAGCGCC-TGTGGCACTGGGGACAAGAACACAACCGG 54
consensus_6196#2      ----------------GAGTCACAAGCNNCCTGTAGCACTGGGGACAAGAACACAACCNG 44
                                        *********  * *** *********************** *

consensus_6196#0      TGATTG-AGAGCGAGTATGTTGCATAGATG--TTTTCTTGACAT-TTCAGCGGAATTCAG 1555
consensus_6196#1      TGATTG-AGAGCGAGTATGTTGCATAGATG--TTTTCTTGACAT-TTCAGCAGAATTCAG 110
consensus_6196#2      TGATTGTAGAGCGAGTATGTTGCATAGAAAGTTTTCCTTGACNTATTCAGCGGAATTCAG 104
                      ****** *********************    *** ****** * ****** ********

consensus_6196#0      GCAA-------------------------GCATGGGAT-TGCTCTTCGGTCGGATGAGGC 1589
consensus_6196#1      GCAACAAGGGTAACCGGTTATGCCTGCAAGCATGGAAT-TGCTCTTCGGTCGGATGAGGC 169
consensus_6196#2      GCAA-------------------------GCATGGGATGTGCTTTTCGGTCGGATGAGGC 139
                      ****                         ****** ** **** ****************

consensus_6196#0      -AACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGGCATAGTCTTG 1648
consensus_6196#1      -AACAAGTGTTCCATATCAATGAGTGCGGCACAAATTGCTAGATGTAGGCCATAGTCTTG 228
consensus_6196#2      CAACNAATGTTCCATATCNATGAGTGCGGCNCCAAATGCTAGATGTAGGGCATAATCTTG 199
                       *** * *********** *********** * ** ************* **** *****

consensus_6196#0      GCTCATGAGACTTAACACATTCTTTT--AACAGTTTTGTTTGGAGGGTTATTTGTTCTGC 1706
consensus_6196#1      GCTCATGAGGCTTAACACATTCTTTT--AACAGTTTTGTTTGGAGGGTTATTTGTTCTGC 286
consensus_6196#2      GCTCATGAGACNTAACACATTCTGTTTAGACCGGTTTGTTTGGAGGGGTATTTGTTNTGC 259
                      ********* * *********** **   ** * ************* ******** ***

consensus_6196#0      AA-TGGCTCATGTTGATGTTCATA-ATTGCCA-TGTTCA-TAGTGAGGAGCTCTTTTCAT 1762
consensus_6196#1      A--TGGCTGTTGTTGATGTTCATA-ATTGCCA-TGTTCA-TAGTGGGGAGCTCTTTTCAT 341
consensus_6196#2      ACATGGCTCATGTTGATGTTNATATATTGCCACTGTTCAGTAGTGAGGAGCTCTTTTNAT 319
                      *  *****  ********** *** ******* ****** ***** *********** **

consensus_6196#0      CTCCAAGCAAGCAATGGGGAAGAAATGGTTGTTGTGTCAGA-TTTGGAATCCCTTATTTT 1821
consensus_6196#1      CTCCAAGCAAGCA-TAGGGAAGAAATGGTTGTCGTGTCAGA-TTTGGAATCCCTTATTTT 399
consensus_6196#2      NTCCCAGCCAGCCATGGGGGAGAAATGGTTGGTGTGTCAGACTTTGGAATCCCCTACTTT 379
                       *** *** ***  * *** ***********  ******** *********** ** ***

consensus_6196#0      TT--GGATTGC-TGTATTCAAAAGGATATGGGCTTGGCAATAAAGGTGAGGGAATTTTAT 1878
consensus_6196#1      TT--GGATTGT-TGTATTCAAA-GGATTTGGGCTTGGCAATAAAGGTGAGGGAATTTTAT 455
consensus_6196#2      TTTGGAGTTGCGTGNATTCNAAAGGATATGGGCTTGGCCATAAAGGNGNGGGNATTTTNT 439
                      **  *  ***  ** **** ** **** ********** ******* * *** ***** *

consensus_6196#0      TGTGCATTTCATTTTGCTACTTCAGTGAAATTCGTTCAAGCTTAAGCGATTTCGTTTTTG 1938
consensus_6196#1      TGCGCATCTGATGGTGCTACTTCAGTGAAATTCATTCAAGCTTCAAAAA----------- 504
consensus_6196#2      TGTGCCAAAAAAAAAA-------------------------------------------- 455
                      ** **     *                                                 

consensus_6196#0      TGTATTTTGGCTCCTCATGTTTAGAGACCTTGTAAGGTACAATTGTACATGTTTAGTTGT 1998
consensus_6196#1      ------------------------------------------------------------
consensus_6196#2      ------------------------------------------------------------
                                                                                  

consensus_6196#0      TTAATTGATTTGAT 2012
consensus_6196#1      --------------
consensus_6196#2      --------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)