cluster # 6199

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Oryza sativa
cluster # 6199 cluster # 6199 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6199#0 length = 1946 sequences # 4
consensusID : consensus_6199#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1946
fasta sequence
                              [AATCTGGTCAAACTCGTCCTCCTCTCTCATCTCCCTCCCCGTCTCGCCGGCGGAGGTAGGCTTCGCCCTCTCGCGGCCTCGCGTGCGCGTCGCCGGCGAGAGGGCCGCCCGTAGGCACGGCGCCGACGGCCTCGATCCTTCCCTATCCACGCGCTCTGCGTGGCATCCTCGTCGAGGTCCCGGAGGGGTTGACCCTGCCAAGCTGCGGCGCGCGCGCGGCCTGTTCGACGGAATGCGCCACTGAGAGACTCCCAGCGTGAGCCGCCCATTCCGAGACAAGAATGGCCGCTGGGGTGGCTGGAGCGAGGGGCGCAGGTCGCCCGCTCATGCGGCTGGTCACCATGAGCGGCGTGCCGATCCTGCGGCAGCTGCACCTGGAGGAACGGCTGCTGCGCCGTACCGGGGATAACTGGTGCATCATCAACGACGGCACGGCTCCTGCCACCATCGTCATGGGCGTGTCAGGGAGAGTTTCGGAGCTTGTCGAGATTGAGCCGGTCCTCCGGGATAAAGTTCCGGTTATAAGGAGGTTCAGTGGTGGTGGCACAGTCATCGTCGATCAGGGGACAGTGTTTGCCACATTCATATGCAGCAAGACCGCCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATGACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTCAAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACATCATTCTTATGGGATTATGATATGAAGAATATGGATTATCTCAAAATCCCAAAACGTGCACCTGATTATCGACTGGCGAGGAACCACACAGATTTCTTGTGTCGCATGAAGGAGTATATGCCATCACGATCCGTTTTCACCGAAGGGATCATCTCTGCCCTCGGAGACCACTTCACAGTCGAACCCACAGAACCAGAGGCAGTGCTCTCTGATGACACAGGGTTTAAGCCTTCCACGAAGCTGTTATCGCCACAAGACCTAGAGGATGTTATCGCCTCAAAAGAATCACTCAAGGTACAGGAAGTCGAAGCATGACAACAGCTGTGAAGATGACTTCTTTTCTCATGATCATGCCTGACAAGCGGTACCATCGAACAGTGAATAAAATCAACCTTCCAGTTTGGACGGCGTTGTGCTCACTGAAAATTTGGCACCGAAGGACACAACCACAGCTTCCTTGAAGCGGACTTCCGCATCTAAAGCATCATTGCTCAAACAGCTAATTGTTATTCA-TTCCGGTTTCGGAATC-TTTTTTACTGGAATAATCAGCTGGAGAACACAAATGTTCCTTCGCTAACGCCATCCTCATCTCTTATAAGTTCTAACCACACTCTTTTTGACCTGTGTTAACCTGTTCTTCATTCCTCAACCATAGTATGTGATATGTCCAGAGCAGTCAAGCAGAAGCTCTCCTTGTCACCACCACCAGCCAGTGCCCAGTAACCCAAAGTGGCAGGCAGCCTGAGTGATCCCCTGCTCCAAATTATTCCCCTCTGCCAATCCTAAGCAGATCGAGCTGATCACAGTCATGGATCGACCAGCCAGGGCGGCCGGCCGTGTGGCTGCTCTGCTTGATCTGGATAGGCTCCGGGGGAGGAGAAAGACTGAGAGAGAATAGTAGCTTGTACTGTTACTTGCGTGTGCCCCCACAAACCTGCAGGATCACACGGGGGGAGCGAGGGGGCGTGTGATGGATGGATGGATGCGGGATGGAGGAGGTCGCCATGGATAACGGACAAAAGGCCATCGCGTCATGCACGAACGCGGCCACAGTGCCCCGTGCACGGACACTCGGCGCGTACCGTCGCCAGGGCGGGCGCGGCCGTACGCCGACCGGAGCAGAGACCGGATGATGATATGATTTGGTGTTTGATAGTAGGTGGCAGC]

[+] EMBL AK121712             [AATCTGGTCAAACTCGTCCTCCTCTCTCATCTCCCTCCCCGTCTCGCCGGCGGAGGTAGGCTTCGCCCTCTCGCGGCCTCGCGTGCGCGTCGCCGGCGAGAGGGCCGCCCGTAGGCACGGCGCCGACGGCCTCGATCCTTCCCTATCCACGCGCTCTGCGTGGCATCCTCGTCGAGGTCCCGGAGGGGTTGACCCTGCCAAGCTGCGGCGCGCGCGCGGCCTGTTCGACGGAATGCGCCACTGAGAGACTCCCAGCGTGAGCCGCCCATTCCGAGACAAGAATGGCCGCTGGGGTGGCTGGAGCGAGGGGCGCAGGTCGCCCGCTCATGCGGCTGGTCACCATGAGCGGCGTGCCGATCCTGCGGCAGCTGCACCTGGAGGAACGGCTGCTGCGCCGTACCGGGGATAACTGGTGCATCATCAACGACGGCACGGCTCCTGCCACCATCGTCATGGGCGTGTCAGGGAGAGTTTCGGAGCTTGTCGAGATTGAGCCGGTCCTCCGGGATAAAGTTCCGGTTATAAGGAGGTTCAGTGGTGGTGGCACAGTCATCGTCGATCAGGGGACAGTGTTTGCCACATTCATATGCAGCAAGACCGCCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATGACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTCAAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACATCATTCTTATGGGATTATGATATGAAGAATATGGATTATCTCAAAATCCCAAAACGTGCACCTGATTATCGACTGGCGAGGAACCACACAGATTTCTTGTGTCGCATGAAGGAGTATATGCCATCACGATCCGTTTTCACCGAAGGGATCATCTCTGCCCTCGGAGACCACTTCACAGTCGAACCCACAGAACCAGAGGCAGTGCTCTCTGATGACACAGGGTTTAAGCCTTCCACGAAGCTGTTATCGCCACAAGACCTAGAGGATGTTATCGCCTCAAAAGAATCACTCAAGGTACAGGAAGTCGAAGCATGACAACAGCTGTGAAGATGACTTCTTTTCTCATGATCATGCCTGACAAGCGGTACCATCGAACAGTGAATAAAATCAACCTTCCAGTTTGGACGGCGTTGTGCTCACTGAAAATTTGGCACCGAAGGACACAACCACAGCTTCCTTGAAGCGGACTTCCGCATCTAAAGCATCATTGCTCAAACAGCTAATTGTTATTCA TTCCGGTTTCGGAATC TTTTTTACTGGAATAATCAGCTGGAGAACACAAATGTTCCTTCGCTAACGCCATCCTCATCTCTTATAAGTTCTAACCACACTCTTTTTGACCTGTGTTAACCTGTTCTTCATTCCTCAACCATAGTATGTGATATGTCCAGAGCAGTCAAGCAGAAGCTCTCCTTGTCACCACCACCAGCCAGTGCCCAGTAACCCAAAGTGGCAGGCAGCCTGAGTGATCCCCTGCTCCAAATTATTCCCCTCTGCCAATCCTAAGCAGATCGAGCTGATCACAGTCATGGATCGACCAGCCAGGGCGGCCGGCCGTGTGGCTGCTCTGCTTGATCTGGATAGGCTCCGGGGGAGGAGAAAGACTGAGAGAGAATAGTAGCTTGTACTGTTACTTGCGTGTGCCCCCACAAACCTGCAGGATCACACGGGGGGAGCGAGGGGGCGTGTGATGGATGGATGGATGCGGGATGGAGGAGGTCGCCATGGATAACGGACAAAAGGCCATCGCGTCATGCACGAACGCGGCCACAGTGCCCCGTGCACGGACACTCGGCGCGTACCGTCGCCAGGGCGGGCGCGGCCGTACGCCGACCGGAGCAGAGACCGGATGATGATATGATTTGGTGTTTGATAGTAGGTGGCAGC]
[+] EMBL CB663212             [               GTCCTCCTCTCTCATCTCCCTCCCCGTCTCGCCGGCGGAGGTAGGCTTCGCCCTCTCGCGGCCTCGCGTGCGCGTCGCCGGCGAGAGGGCCGCCCGTAGGCACGGCGCCGACGGCCTCGATCCTTCCCTATCCACGCGCTCTGCGTGGCATCCTCGTCGAGGTCCCGGAGGGGTTGACCCTGCCAAGCTGCGGCGCGCGCGCGGCCTGTTCGACGGAATGCGCCACTGAGAGACTCCCAGCGTGAGCCGCCCATTCCGAGACAAGAATGGCCGCTGGGGTGGCTGGAGCGAGGGGCGCAGGTCGCCCGCTCATGCGGCTGGTCACCATGAGCGGCGTGCCGATCCTGCGGCAGCTGCACCTGGAGGAACGGCTGCTGCGCCGTACCGGGGATAACTGGTGCATCATCAACGACGGCACGGCTCCTGCCACCATCGTCATGGGCGTGTCAGGGAGAGTTTCGGAGCTTGTCGAGATTGAGCCGGTCCTCCGGGATAAAGTTCCGGTTATAAGGAGGTTCAGTGGTGGTGGCACAGTCATCGTCGATCAGGGGACAGTGTTTGCCACATTCATATGCAGCAAGACCGCCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATGACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTCAAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACATCATTCTTATGGGATTATGATATGAAGAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB635283             [                                                                                                                                                                             cAGG CCTAGAAGGGTTGACCCTGCCAAGCTGCGGCGCGCGCGCGGCCTGTTCGACGGAATGCGCCACTGAGAGACTCCCAGCGTGAGCCGCCCATTCCGAGACAAGAATGGCCGCTGGGGTGGCTGGAGCGAGGGGCGCAGGTCGCCCGCTCATGCGGCTGGTCACCATGAGCGGCGTGCCGATCCTGCGGCAGCTGCACCTGGAGGAACGGCTGCTGCGCCGTACCGGGGATAACTGGTGCATCATCAACGACGGCACGGCTCCTGCCACCATCGTCATGGGCGTGTCAGGGAGAGTTTCGGAGCTTGTCGAGATTGAGCCGGTCCTCCGGGATAAAGTTCCGGTTATAAGGAGGTTCAGTGGTGGTGGCACAGTCATCGTCGATCAGGGGACAGTGTTTGCCACATTCATATGCAGCAAGACCGCCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATGACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTCAAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACATCATTCTTATGGGATTATGATATGAAGAATATGGATTATCTCAAAATCCCAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA766275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCCACATTCGTATGCAGCAAGACCGCCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATGACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTCAAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACATCATTCTTATGGGATTATGATATGAAGAATATGGATTATCTCAAAATCCCAAAACGTGCACCTGATTATCGACTGGCGAGGAACCACACAGATTTCTTGTGTCGCATGAAGGAGTATATGCCATCACGATCCGTTTTCACCGAAGGGATCATCTCTGCCCTCGGAGACCACTTCACAGTCGAACCCACAGAACCAGAGGCAGTGCTCTCTGATGACACAGGGTTTAAGCCTTCCACGAAGCTGTTATCGCCACAAGAACTAGAGGATGTTATCGCCTCAAAAGAATCACTCAAGGTACAGGAAGTCGAAGCATGACAACAGCTGTGAAGATGACTTCTTTTCTCATGATCATGCCTGACAAGCGGTACCATCGAACAGTGAATAAAATCAACCTTCCAGTTTGGACGGCGTTGTGCTCACTGAAAATTTGGCACCGAAGGACACAACCACAGCTTNCTTGAAGCGGACTTNCGCATCTAAAGCATCATTGCTCAAACAGCTAATTGGTATTCATTTCCGGTTTCGGAATCTTTTTTTACTGGAATAATCAGCTGGAGAACACAGATGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_6199#0
AATCTGGTCAAACTCGTCCTCCTCTCTCATCTCCCTCCCCGTCTCGCCGGCGGAGGTAGG
CTTCGCCCTCTCGCGGCCTCGCGTGCGCGTCGCCGGCGAGAGGGCCGCCCGTAGGCACGG
CGCCGACGGCCTCGATCCTTCCCTATCCACGCGCTCTGCGTGGCATCCTCGTCGAGGTCC
CGGAGGGGTTGACCCTGCCAAGCTGCGGCGCGCGCGCGGCCTGTTCGACGGAATGCGCCA
CTGAGAGACTCCCAGCGTGAGCCGCCCATTCCGAGACAAGAATGGCCGCTGGGGTGGCTG
GAGCGAGGGGCGCAGGTCGCCCGCTCATGCGGCTGGTCACCATGAGCGGCGTGCCGATCC
TGCGGCAGCTGCACCTGGAGGAACGGCTGCTGCGCCGTACCGGGGATAACTGGTGCATCA
TCAACGACGGCACGGCTCCTGCCACCATCGTCATGGGCGTGTCAGGGAGAGTTTCGGAGC
TTGTCGAGATTGAGCCGGTCCTCCGGGATAAAGTTCCGGTTATAAGGAGGTTCAGTGGTG
GTGGCACAGTCATCGTCGATCAGGGGACAGTGTTTGCCACATTCATATGCAGCAAGACCG
CCATTCCTGGACTGCAGCCATTTCCGCGGGATATCATGTCTTGGACTGGTCAGTTGTATG
ACAAGGTGTTTGATGGTTTCGGTGAATTTCATCTGCGTGAGAATGATTATGCCTTTAGTC
AAAGGAAGTTTGGAGGAAATGCTCAATCCATTACAAGAGATCGTTGGGTTCATCATACAT
CATTCTTATGGGATTATGATATGAAGAATATGGATTATCTCAAAATCCCAAAACGTGCAC
CTGATTATCGACTGGCGAGGAACCACACAGATTTCTTGTGTCGCATGAAGGAGTATATGC
CATCACGATCCGTTTTCACCGAAGGGATCATCTCTGCCCTCGGAGACCACTTCACAGTCG
AACCCACAGAACCAGAGGCAGTGCTCTCTGATGACACAGGGTTTAAGCCTTCCACGAAGC
TGTTATCGCCACAAGACCTAGAGGATGTTATCGCCTCAAAAGAATCACTCAAGGTACAGG
AAGTCGAAGCATGACAACAGCTGTGAAGATGACTTCTTTTCTCATGATCATGCCTGACAA
GCGGTACCATCGAACAGTGAATAAAATCAACCTTCCAGTTTGGACGGCGTTGTGCTCACT
GAAAATTTGGCACCGAAGGACACAACCACAGCTTCCTTGAAGCGGACTTCCGCATCTAAA
GCATCATTGCTCAAACAGCTAATTGTTATTCATTCCGGTTTCGGAATCTTTTTTACTGGA
ATAATCAGCTGGAGAACACAAATGTTCCTTCGCTAACGCCATCCTCATCTCTTATAAGTT
CTAACCACACTCTTTTTGACCTGTGTTAACCTGTTCTTCATTCCTCAACCATAGTATGTG
ATATGTCCAGAGCAGTCAAGCAGAAGCTCTCCTTGTCACCACCACCAGCCAGTGCCCAGT
AACCCAAAGTGGCAGGCAGCCTGAGTGATCCCCTGCTCCAAATTATTCCCCTCTGCCAAT
CCTAAGCAGATCGAGCTGATCACAGTCATGGATCGACCAGCCAGGGCGGCCGGCCGTGTG
GCTGCTCTGCTTGATCTGGATAGGCTCCGGGGGAGGAGAAAGACTGAGAGAGAATAGTAG
CTTGTACTGTTACTTGCGTGTGCCCCCACAAACCTGCAGGATCACACGGGGGGAGCGAGG
GGGCGTGTGATGGATGGATGGATGCGGGATGGAGGAGGTCGCCATGGATAACGGACAAAA
GGCCATCGCGTCATGCACGAACGCGGCCACAGTGCCCCGTGCACGGACACTCGGCGCGTA
CCGTCGCCAGGGCGGGCGCGGCCGTACGCCGACCGGAGCAGAGACCGGATGATGATATGA
TTTGGTGTTTGATAGTAGGTGGCAGC
clustalw multiple alignements is not computed in this case