These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6203#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1111 fasta sequence [AGCACGTTCGCCGACGTTCACGCGCCGCCGGGGCCGAAGCAGAGGGAGCGCGACCACCTCGGCGACGGCCAGCCGCCGACGTGCAGCCACCGGCGAACCCCCCCTCTCCCACCCTCCCTACTTTCCGCCGGTGAAGGGTTGGTCCGAGGTCTCAGCACGTTTGCCACTGTTCACGTGCCGGACCAAATCAGAGGAGGGTGACTACCTCAGGAACGGTCGATCGGCGTCTATTGGCTTCCCTCCAGTGAAGGTTCATACATTTGCATGGATCAGGAAGAGCATGTAATTTGTGGCATAGAGGATGCCCGTCGCCTCGTGGGCCTTCCACCCCCAATCCATATCACGATGACAGAGTGTCTGGTAAAGGACGCGGGAGAGGTGCTGAAGCTACTTGATGAGAACATTACCAGTGGGAGATGGACTGTCTCAGATGAGACTGTAGCCCTCCTCAGGGTTCTTGCAGAAGGTTGTGAGGATCTGATGTATG-CTAAG-AAGG-AATTAACTGACACTGT-CAAGGCTG-CACAGGATGACCTGAT-CACGTTGGGAGGCAACACCCTAT-CAGTGGAGGAACAGCTTTTGCTG-CCAGAGAAAGAAGATCGTCGTATTTTGGTTCTCCGTGCACTTAACCTT-CCACCGGACAGCAAGCCATCTCGGAGCTTTGACGTGGAGAACATCGATGCCGT-GCTTGCTGCGCGTGGTCGGCTCCGTGGTCAGATTGTACAGGCCCGAGCAGACATGGAGGGTCTGAGGCAGTACATCACGGAGACGTGGTTG-CCGTGGGTAGAG-CAGCGGTTGAACACTCATCTCACCCTGGGAGAGCCAGTTATGCCGTAGAGTGATTCCTTCACAGTGTTGTTTTGAGTCTTCATCATGAAACTTGTTGCCTTTAGCTTACTGATGTCTCCGTATATGTGCCTCTTCTAAACTGTAGTTTCCAGAATCTGCATGTCCCAGGATTGACTAGTAACCACTTATTTCCTGAATCTGCATGTCCCAGCAGGATAACTAAGTTGTTGGTACTGCCATGTTAATTTGTTGTTTTGGATGCTACTTTCCCCCAGATATTTCTGTTATCCACTGTAATATATTCACTCACCTTTATAGCAAAAAA] [+] EMBL AK121834 [AGCACGTTCGCCGACGTTCACGCGCCGCCGGGGCCGAAGCAGAGGGAGCGCGACCACCTCGGCGACGGCCAGCCGCCGACGTGCAGCCACCGGCGAACCCCCCCTCTCCCACCCTCCCTACTTTCCGCCGGTGAAGGGTTGGTCCGAGGTCTCAGCACGTTTGCCACTGTTCACGTGCCGGACCAAATCAGAGGAGGGTGACTACCTCAGGAACGGTCGATCGGCGTCTATTGGCTTCCCTCCAGTGAAGGTTCATACATTTGCATGGATCAGGAAGAGCATGTAATTTGTGGCATAGAGGATGCCCGTCGCCTCGTGGGCCTTCCACCCCCAATCCATATCACGATGACAGAGTGTCTGGTAAAGGACGCGGGAGAGGTGCTGAAGCTACTTGATGAGAACATTACCAGTGGGAGATGGACTGTCTCAGATGAGACTGTAGCCCTCCTCAGGGTTCTTGCAGAAGGTTGTGAGGATCTGATGTATG CTAAG AAGG AATTAACTGACACTGT CAAGGCTG CACAGGATGACCTGAT CACGTTGGGAGGCAACACCCTAT CAGTGGAGGAACAGCTTTTGCTG CCAGAGAAAGAAGATCGTCGTATTTTGGTTCTCCGTGCACTTAACCTT CCACCGGACAGCAAGCCATCTCGGAGCTTTGACGTGGAGGACATCGATGCCGT GCTTGCTGCGCGTGGTCGGCTCCGTGGTCAGATCGTACAGGCCCGAGCAGACATGGAGGGTCTGAGGCAGTACATCACGGAGACGTGGTTG CCGTGGGTAGAG CAGCGGTTGAACACTCATCTCACCCTGGGAGAGCCAGTTATGCCGTAGAGTGATTCCTTCACAGTGTTGTTTTGAGTCTTCATCATGAAACTTGTTGCCTTTAGCTTACTGATGTCTCCGTATATGTGCCTCTTCTAAACTGTAGTTTCCAGAATCTGCATGTCCCAGGATTGACTAGTAACCACTTATTTCCTGAATCTGCATGTCCCAGCAGGATAACTAAGTTGTTGGTACTGCCATGTTAATTTGTTGTTTTGGATGCTACTTTCCCCCAGATATTTCTGTTATCCACTGTAATATATTCACTCA ] [+] EMBL AU083375 [ CGCGCCGCCGGGGCCGAAGCAGAGGGAGCGCGACCACCTCGGCGACGGCCAGCCGCCGACGTGCAGCCACCGGCGAACCCCCCCTCTCCCACCCTCCCTACTTTCCGCCGGTGAAGGGTTGGTCCGAGGTCTCAGCACGTTTGCCACTGTTCACGTGCCGGACCAAATCAGAGGAGGGTGACTACCTCAGGAACGGTCGATCGGCGTCTATTGGCTTCCCTCCAGTGAAGGTTCATACATTTGCATGGATCAGGAAGAGCATGTAATTTGTGGCATAGAGGATGCCCGTCGCCTCGTGGGCCTTCCACCCCCAATCCATATCACGATGACAGAGTGTCTGGTAAAGGACGCGGGAGAGGTGCTGAAGCTACTTGATGAGAACATTACCAG ] [+] EMBL AU083376 [ nTTCTTGCAGAA GTTGTGAGGATCTGATGTATGCCTAAGAAAGGAAATTAACTGACACTGTCCAAGGCTGCCACAGGATGA CTGATCCACNTTGGGAGGCAACACCNTATCCAGTGGAGGAACAGCTTTTGCTGCCCAGAGAAAGAAGATCGTCGTATTTTGGTTCTCCGTGCACTTAACCTT CCACCGGACAGCAAGCCATCTCGGAGCTTTGACGTGGAGAACATCGATGCCGTGGCTTG TGCGCGTGGTCGGCTCCGTGGTCAGATTGTACAGGCCCGAGCAGACATGGAGGGTCTGAGGCAGTACATCACGGAGACGTGGTTGCCCGTGGGTAGAGTCAGCGGTTGAACACTCATCTCA CCTGGGAGAGCCAGTTATGCCGTAGAGTGATTCCTTCACAGTGTTGTTTTGAGTCTTCATCATGAAACTTGTTGCCTTTAGCTTACTGATGTCTCCGTATATGTGCCTCTTCTAAACTGTAGTTTCCAGAATCTGCATGTCCCAGGATTGACTAGTAACCACTTATTTCCTGAATCTGCATGTCCCAGCAGGATAACTAAGTTGTTGGTACTGCCATGTTAATTTGTTGTTTTGGATGCTACTTTCCCCCAGATATTTCTGTTATCCACTGTAATATATTCACTCACCTTTATAGCAAAAAA] [-] EMBL AU225650 [ ccgctTG CCAGAGAAAGAAGATCGTCGTATTTGGGTTCTCCGTGCACTTAACCTTCCCACCGGACAGCAAGCCATCTCGGAGCTTTGACGTGGAGAACATCGATGCCGT GCTTGCTGCGCGTGGTCGGCTCCGTGGTCAGATTGTACAGGCCCGAGCAGACATGGAGGGTCTGAGGCAGTACATCACGGAGACGTGGTTG CCGTGGGTAGAG CAGCGGTTGAACACTCATCTCACCCTGGGAGAGCCAGTTATGCCGTAGAGTGATTCCTTCACAGTGTTGTTTTGAGTCTTCATCATGAAACTTGTTGCCTTTAGCTTACTGATGTCTCCGTATATGTGCCTCTTCTAAACTGTAGTTTCCAGAATCTGCATGTCCCAGGATTGACTAGTAACCACTTATTTCCTGAATCTGCATGTCCCAGCAGGATAACTAAGTTGTTGagcggc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||