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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6213#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2534 fasta sequence
[ACGAGCCTCTGTCTTGGTTTGCACCTGCAAATGGACCGACGACGACGACCACGGACGCCTCTTCTGACCGCACTGTTGCTCGTCTCGCTGGCTGCGGCGGCGGCGGCGAGCGGCGCGCCCTGCTCCGGTCTATCAAGCCGCTCTTCGTCGGCGGCGAGTTCGGCTACGGCGATGCCTGGAACGAGAGCACCGACTGCTGCGGCTGGGAAGGCGTGGTCTGCGGCGGCGGCGGCGGCGGCCACCACGTGGTGTCGCTGTCTCTGGTCCAGGCCGGCATCGCCGGCGCCGTCGACGGCGCGGCGTTCGCGGCGTTCACGGCGCTGCAGGAGCTGGACCTGTCGTGGAATCGAATCTCTGCCTTCTCTCTTCCATCTGCAGGAGGTGAGCGTGCATTTCAGAAGCTTAGCAAGCTCTCGCTTTCGCACAACAGTCTAACAAATGAAGGCGTTGCTGCTCTAGTTATCAACCGAACTACACTTTCAGAGCTGTACCTTGGCGGAAACCAGTTACTTACAACAAGTTGGATATCCAATTTGACGTCTCTTAGGGTGGTTGATTTATCCCAGAACTTCTTACACGGATACAACGGTATATGTAACCTCCATCAACTAGAGTACCTACACCTTGGTGTCAACATGCTACATGGAACCATAAATTCATGCTTGGGAAAACTACAACAATTGAAGTACCTGAACATGGAAAGAAACTTTCTCATGGGGGAGATTGCACCGAACTTACTTATCAACTTGACCAAACTGGAGACTATACACCTGGGGGTGAACAATCTTACCGGCACATTCATGCTCTCCTGGCTAGCAAACAGCTCAAACCTCGTTGATGTTGTCCTCTCACACAACTACAATCTGAAAATCGAAACCGAGCTTGTGAGATGGACACCGTTGTTCCAGCTGGTATACTTGAATTTAAGCAACTGTGTTATCAATAGGCGAAGCAATGGAGTTGTGCCGACTTTTCTGTCAACCCAGCTTAGCCTATCCGGGATCGATCTCTCGCATTGTTCGCTCCAAGGCAGGATTCCACCCTGGCTGTTCTACAATCTATCTGATTTTGTCTTGCTCAATGGCAATAGAATGGATGTCATTGATATGGATGGGCTTGGTGGTAACATACCTCACCGGTGCAGGTGCTTGATTTGTCAGAGAACAAAATATCGATGTCGATCCCGACCAACTTTGGAAGCATTTTTCAGTTTTTGGACTACTGTGACATGTCCTCCAACAGGTTGTACGGTGGGATTCCATCATTGGCAGAGGCAACATCATTGGAGGTGCTTGACTTGTCATCTAACAACCTCAATGAGGAAATATTGCCAACATTAATAGGGAATTTGTCAATTCTAACATCTCTTCTACTCTCCAATAATGACCTGACAGGGCCTATGCCACCTTTCCATTGGAATTTGGGTAGTTTGAAGCACCTCAGCCTTGAGAACAACCGATTCTCGGGATGGCTATCTCCATTGCTGTCGAACAGCAGTAATCTCAAGACACTCAATGTGAGAAACAACCATCTATCAGGAATCATCCCGGATGGCCTCCTGAGCTTCCAACAGCTTGGTGTGATCCTCCTTGGAGGGAATGATTTTCATGGTCCAATACCATTGGACCTTTGCTTCAACAACTATCTCCACTTTGTTGATCTCTCCAACAATCAATTCTCTGGGGAGATACCAAATTGCTTCTACAATGATTTCTGGACAGATTTGCCAATGTACTTCAACGATGACCCATTCTCAGGCAATATCACAGAGCGCATGTCTGTCGACTTCACGACGAAAGGCGAGAACCTTACCTACATGGGAGAGCCTCTAGTGCTCATGACGGGCATTGATCTGTCCATGAATCAATTGTCAGGCGCCATCCCTCCGCCATTAGGTTTCCTGAGGCAGCTCAAGTCTCTAAACTTATCACATAACCAACTTGTTGGCCCGATACCAGAGACATTCATGTATATGCAGGATATGGAGAGCCTTGACCTCTCATACAACCACCTCAATGGCAGCCTGCCTATGCAGCTGGCAAATCTCTCCTTCCTGTGCTCGTTCAATGTCGCCTACAACAACCTCTCTGGTGAGATACCCTTCCAACAACAGCTTGGGACATTCGATGAATCGGCATTCGAGGGGAATGACAATCTCTGTGGTGGAATCATCAACAAAAACTGCTCATCAGTGCTGCATCAGAATCAAGGAGTGTTCGACGCCATTGACACGTCACTTGTTTTCTGGTCCTACGTTTTTGGGTGTTTTGCACTTGGATTTTGGGGCACCGTGGCATTGCTGATATGGGATGAAGTGTGCAGGAGGAGACTGTGTGACTTGATGGATGCTCTAATGTTTAAGCTGGGTTGGGAATTTGTGCCTTGAATCCTGATATGTCTAGCTAAGAGTCTAGGAGACATGGAAAGACAGAGCAATCCCTTCTTTTTTTTTGCACGAGATGCACATGCTGTCACATCCTGATTTTCGTTTCAGGATTTATAAATTATTTAATAAATTAATAATAGAATTTATA]
[+] EMBL AK067558 [ACGAGCCTCTGTCTTGGTTTGCACCTGCAAATGGACCGACGACGACGACCACGGACGCCTCTTCTGACCGCACTGTTGCTCGTCTCGCTGGCTGCGGCGGCGGCGGCGAGCGGCGCGCCCTGCTCCGGTCTATCAAGCCGCTCTTCGTCGGCGGCGAGTTCGGCTACGGCGATGCCTGGAACGAGAGCACCGACTGCTGCGGCTGGGAAGGCGTGGTCTGCGGCGGCGGCGGCGGCGGCCACCACGTGGTGTCGCTGTCTCTGGTCCAGGCCGGCATCGCCGGCGCCGTCGACGGCGCGGCGTTCGCGGCGTTCACGGCGCTGCAGGAGCTGGACCTGTCGTGGAATCGAATCTCTGCCTTCTCTCTTCCATCTGCAGGAGGTGAGCGTGCATTTCAGAAGCTTAGCAAGCTCTCGCTTTCGCACAACAGTCTAACAAATGAAGGCGTTGCTGCTCTAGTTATCAACCGAACTACACTTTCAGAGCTGTACCTTGGCGGAAACCAGTTACTTACAACAAGTTGGATATCCAATTTGACGTCTCTTAGGGTGGTTGATTTATCCCAGAACTTCTTACACGGATACAACGGTATATGTAACCTCCATCAACTAGAGTACCTACACCTTGGTGTCAACATGCTACATGGAACCATAAATTCATGCTTGGGAAAACTACAACAATTGAAGTACCTGAACATGGAAAGAAACTTTCTCATGGGGGAGATTGCACCGAACTTACTTATCAACTTGACCAAACTGGAGACTATACACCTGGGGGTGAACAATCTTACCGGCACATTCATGCTCTCCTGGCTAGCAAACAGCTCAAACCTCGTTGATGTTGTCCTCTCACACAACTACAATCTGAAAATCGAAACCGAGCTTGTGAGATGGACACCGTTGTTCCAGCTGGTATACTTGAATTTAAGCAACTGTGTTATCAATAGGCGAAGCAATGGAGTTGTGCCGACTTTTCTGTCAACCCAGCTTAGCCTATCCGGGATCGATCTCTCGCATTGTTCGCTCCAAGGCAGGATTCCACCCTGGCTGTTCTACAATCTATCTGATTTTGTCTTGCTCAATGGCAATAGAATGGATGTCATTGATATGGATGGGCTTGGTGGTAACATACCTCACCGGTGCAGGTGCTTGATTTGTCAGAGAACAAAATATCGATGTCGATCCCGACCAACTTTGGAAGCATTTTTCAGTTTTTGGACTACTGTGACATGTCCTCCAACAGGTTGTACGGTGGGATTCCATCATTGGCAGAGGCAACATCATTGGAGGTGCTTGACTTGTCATCTAACAACCTCAATGAGGAAATATTGCCAACATTAATAGGGAATTTGTCAATTCTAACATCTCTTCTACTCTCCAATAATGACCTGACAGGGCCTATGCCACCTTTCCATTGGAATTTGGGTAGTTTGAAGCACCTCAGCCTTGAGAACAACCGATTCTCGGGATGGCTATCTCCATTGCTGTCGAACAGCAGTAATCTCAAGACACTCAATGTGAGAAACAACCATCTATCAGGAATCATCCCGGATGGCCTCCTGAGCTTCCAACAGCTTGGTGTGATCCTCCTTGGAGGGAATGATTTTCATGGTCCAATACCATTGGACCTTTGCTTCAACAACTATCTCCACTTTGTTGATCTCTCCAACAATCAATTCTCTGGGGAGATACCAAATTGCTTCTACAATGATTTCTGGACAGATTTGCCAATGTACTTCAACGATGACCCATTCTCAGGCAATATCACAGAGCGCATGTCTGTCGACTTCACGACGAAAGGCGAGAACCTTACCTACATGGGAGAGCCTCTAGTGCTCATGACGGGCATTGATCTGTCCATGAATCAATTGTCAGGCGCCATCCCTCCGCCATTAGGTTTCCTGAGGCAGCTCAAGTCTCTAAACTTATCACATAACCAACTTGTTGGCCCGATACCAGAGACATTCATGTATATGCAGGATATGGAGAGCCTTGACCTCTCATACAACCACCTCAATGGCAGCCTGCCTATGCAGCTGGCAAATCTCTCCTTCCTGTGCTCGTTCAATGTCGCCTACAACAACCTCTCTGGTGAGATACCCTTCCAACAACAGCTTGGGACATTCGATGAATCGGCATTCGAGGGGAATGACAATCTCTGTGGTGGAATCATCAACAAAAACTGCTCATCAGTGCTGCATCAGAATCAAGGAGTGTTCGACGCCATTGACACGTCACTTGTTTTCTGGTCCTACGTTTTTGGGTGTTTTGCACTTGGATTTTGGGGCACCGTGGCATTGCTGATATGGGATGAAGTGTGCAGGAGGAGACTGTGTGACTTGATGGATGCTCTAATGTTTAAGCTGGGTTGGGAATTTGTGCCTTGAATCCTGATATGTCTAGCTAAGAGTCTAGGAGACATGGAAAGACAGAGCAATCCCTTCTTTTTTTTTGCACGAGATGCACATGCTGTCACATCCTGATTTTCGTTTCAGGATTTATAAATTATTTAATAAATTAATAATAGAATTTATA]
consensusID : consensus_6213#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[TTTTTTTTTTTTTTTTTAAATTCTAATAATAATTTATTAAATAATTTATAAATCCGGAAACGAAAATCAGGGTGTGACAAATCTACCCCCCTTACAAAGAATCTCGTCCCGAGATTCGGAACGGCTAGAAAGAAAAAGGCATAGGTAAACTGCAGTCTATCTTATTCCATAACTCCGATAATTATTCTAAGGCTTTAAAGAAAACTACTGCTTCTTTGAAACTGGGGGCTGAGCTGTAACACTTGAAGACACAACCGGCACTGCATTGGCTCCTGTGAGGACAATGTTGTTGACTTGGCCTTGGGGCTGTTGACGCTTCGGCTTCGGACACTCTTTTACGAAGGGACCTGGCTCATAACAATTGAAACACACCCGCTGCTCCCTTCCATTACTGGTATCTTCTTGAGATTGATCCTGCTGAACTGGCACCGACTGATTAGCTTGCTCGATATTAACTTCATTGCTTTCATTAGCCTCTGATTTGATCTCACCAGCGATGCTCAACTGTTGCGACTGTTCTTGACCAGCGGAAGAAGATTCACCAATTTGGAGGGACTTAATACGCTGGGTTTGGGTACTACCTTGTGGCTCCTAGAAAGACATCCTTCCTGTCTTACGAGTGTCCGCTCCTGTTTTGCTTGGCCTCCAGGCGGAATGGCTTTGGCAACCAACTTCCGGAAGATCC]
[+] EMBL CA759167 [TTTTTTTTTTTTTTTTTAAATTCTAATAATAATTTATTAAATAATTTATAAATCCGGAAACGAAAATCAGGGTGTGACAAATCTACCCCCCTTACAAAGAATCTCGTCCCGAGATTCGGAACGGCTAGAAAGAAAAAGGCATAGGTAAACTGCAGTCTATCTTATTCCATAACTCCGATAATTATTCTAAGGCTTTAAAGAAAACTACTGCTTCTTTGAAACTGGGGGCTGAGCTGTAACACTTGAAGACACAACCGGCACTGCATTGGCTCCTGTGAGGACAATGTTGTTGACTTGGCCTTGGGGCTGTTGACGCTTCGGCTTCGGACACTCTTTTACGAAGGGACCTGGCTCATAACAATTGAAACACACCCGCTGCTCCCTTCCATTACTGGTATCTTCTTGAGATTGATCCTGCTGAACTGGCACCGACTGATTAGCTTGCTCGATATTAACTTCATTGCTTTCATTAGCCTCTGATTTGATCTCACCAGCGATGCTCAACTGTTGCGACTGTTCTTGACCAGCGGAAGAAGATTCACCAATTTGGAGGGACTTAATACGCTGGGTTTGGGTACTACCTTGTGGCTCCTAGAAAGACATCCTTCCTGTCTTACGAGTGTCCGCTCCTGTTTTGCTTGGCCTCCAGGCGGAATGGCTTTGGCAACCAACTTCCGGAAGATCC]
consensusID : consensus_6213#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence
[AAGGGGAGTCCAGCAACTCCCAAAACAAGAAAAAGAAACCCAACACTCCTTCCACTCAGGCTTCTAATGGTGCCCATAAGGGCAAAGCTCAGGTTCCAGCAGGACAAAATTCTGCTGGTAAGTTCCTTTGCAAGTTTTGCAAGGCAGAAGGTCATGCACAGAGGGACTGTGAAGGCTTTCGGGCTTGGCTTGCTAAGAAAGGGATTCCTTTCCATGAGGACGCTAAGAAAGGGGGAGCGGATCCTAAGAGTGGCTGATGGAGCTGAAATTAAAGTGATGGCCGTTGGGGAGCTTCATCTTCGACTTCCAAGCGGCAATAATCTTTTACTTCATGATGTTCTTTATGCTCCCTCTGTTAAGAGGAACCTTATTTCTGTAATGGTTTTAACGAACAGTGGTTATGTGTCACACCCTGATTTTCGTGTTAGGATTTATAAATTATTTAATAAATTATTAATAGAATTTATATGAAATGTTCATTAATTTACAAGTGAAGTTAAAAA]
[+] EMBL AU085919 [AAGGGGAGTCCAGCAACTCCCAAAACAAGAAAAAGAAACCCAACACTCCTTCCACTCAGGCTTCTAATGGTGCCCATAAGGGCAAAGCTCAGGTTCCAGCAGGACAAAATTCTGCTGGTAAGTTCCTTTGCAAGTTTTGCAAGGCAGAAGGTCATGCACAGAGGGACTGTGAAGGCTTTCGGGCTTGGCTTGCTAAGAAAGGGATTCCTTTCCATGAGGACGCTAAGAAAGGGGGAGCGGATCCTAAGAGTGGCTGATGGAGCTGAAATTAAAGTGATGGCCGTTGGGGAGCTTCATCTTCGACTTCCAAGCGGCAATAATCTTTTACTTCATGATGTTCTTTATGCTCCCTCTGTTAAGAGGAACCTTATTTCTGTAATGGTTTTAACGAACAGTGGTTATGTGTCACACCCTGATTTTCGTGTTAGGATTTATAAATTATTTAATAAATTATTAATAGAATTTATATGAAATGTTCATTAATTTACAAGTGAAGTTAAAAA]
consensusID : consensus_6213#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[TTTTTTTAAATTCTAATAATAATTTATTAAATAATTTATAAATCCTGAAACGAAAATCAGGATGTGACAACCGGGCAGAATCCGCTAAGGCCACAGGCAGATAATTCGACATGGCTTTGCTGTCTCCTCCTGCTGCGCGGATTGCGAGACCATAGACGGTGAGCCAAGACTCAGGGTTGGTGGTGCCGTCATACTTCTCGATTCCAGTCGGCTTAAAGCCGGCTGGCCAATCCACTCGATGCAGATCATTTGTGAAGGCAGCAACTCCGTCCATATCGTCGTCGTAGCGATCTGGTGAATGATGGGNGAGTATGGCCTCTTGCTGCGCGGCGCTGGTTGATGGTGTCGCGAAGATCGACGGGGCGCCTTCGATGTGGGGAGTGTGNGGTCGTTCAACTCGACGCTCCCTATGTCGTTCGGGAGGCGAGCGGACAGATCGCTCACCATGTCCCCTGCTCCTGCGACTAGGTCCGGCAC]
[+] EMBL CF315740 [TTTTTTTAAATTCTAATAATAATTTATTAAATAATTTATAAATCCTGAAACGAAAATCAGGATGTGACAACCGGGCAGAATCCGCTAAGGCCACAGGCAGATAATTCGACATGGCTTTGCTGTCTCCTCCTGCTGCGCGGATTGCGAGACCATAGACGGTGAGCCAAGACTCAGGGTTGGTGGTGCCGTCATACTTCTCGATTCCAGTCGGCTTAAAGCCGGCTGGCCAATCCACTCGATGCAGATCATTTGTGAAGGCAGCAACTCCGTCCATATCGTCGTCGTAGCGATCTGGTGAATGATGGGNGAGTATGGCCTCTTGCTGCGCGGCGCTGGTTGATGGTGTCGCGAAGATCGACGGGGCGCCTTCGATGTGGGGAGTGTGNGGTCGTTCAACTCGACGCTCCCTATGTCGTTCGGGAGGCGAGCGGACAGATCGCTCACCATGTCCCCTGCTCCTGCGACTAGGTCCGGCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ACGAGCCTCTGTCTTGGTTTGCACCTGCAAATGGACCGACGACGACGACCACGGACGCCT 60
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CTTCTGACCGCACTGTTGCTCGTCTCGCTGGCTGCGGCGGCGGCGGCGAGCGGCGCGCCC 120
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TGCTCCGGTCTATCAAGCCGCTCTTCGTCGGCGGCGAGTTCGGCTACGGCGATGCCTGGA 180
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ACGAGAGCACCGACTGCTGCGGCTGGGAAGGCGTGGTCTGCGGCGGCGGCGGCGGCGGCC 240
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ACCACGTGGTGTCGCTGTCTCTGGTCCAGGCCGGCATCGCCGGCGCCGTCGACGGCGCGG 300
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CGTTCGCGGCGTTCACGGCGCTGCAGGAGCTGGACCTGTCGTGGAATCGAATCTCTGCCT 360
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TCTCTCTTCCATCTGCAGGAGGTGAGCGTGCATTTCAGAAGCTTAGCAAGCTCTCGCTTT 420
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CGCACAACAGTCTAACAAATGAAGGCGTTGCTGCTCTAGTTATCAACCGAACTACACTTT 480
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CAGAGCTGTACCTTGGCGGAAACCAGTTACTTACAACAAGTTGGATATCCAATTTGACGT 540
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CTCTTAGGGTGGTTGATTTATCCCAGAACTTCTTACACGGATACAACGGTATATGTAACC 600
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TCCATCAACTAGAGTACCTACACCTTGGTGTCAACATGCTACATGGAACCATAAATTCAT 660
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 GCTTGGGAAAACTACAACAATTGAAGTACCTGAACATGGAAAGAAACTTTCTCATGGGGG 720
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 AGATTGCACCGAACTTACTTATCAACTTGACCAAACTGGAGACTATACACCTGGGGGTGA 780
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ACAATCTTACCGGCACATTCATGCTCTCCTGGCTAGCAAACAGCTCAAACCTCGTTGATG 840
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TTGTCCTCTCACACAACTACAATCTGAAAATCGAAACCGAGCTTGTGAGATGGACACCGT 900
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TGTTCCAGCTGGTATACTTGAATTTAAGCAACTGTGTTATCAATAGGCGAAGCAATGGAG 960
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TTGTGCCGACTTTTCTGTCAACCCAGCTTAGCCTATCCGGGATCGATCTCTCGCATTGTT 1020
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CGCTCCAAGGCAGGATTCCACCCTGGCTGTTCTACAATCTATCTGATTTTGTCTTGCTCA 1080
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ATGGCAATAGAATGGATGTCATTGATATGGATGGGCTTGGTGGTAACATACCTCACCGGT 1140
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 GCAGGTGCTTGATTTGTCAGAGAACAAAATATCGATGTCGATCCCGACCAACTTTGGAAG 1200
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CATTTTTCAGTTTTTGGACTACTGTGACATGTCCTCCAACAGGTTGTACGGTGGGATTCC 1260
consensus_6213#1 ----------------------TTTTTTTTTTTTTTTTTAAATTCTAATAATAATTTATT 38
consensus_6213#3 --------------------------------TTTTTTTAAATTCTAATAATAATTTATT 28
consensus_6213#2 ---------------------------------------------------------AAG 3
consensus_6213#0 ATCATTGGCAGAGGCAACATCATTGGAGGTGCTTGACTTGTCATCTAACAACCTCAATGA 1320
consensus_6213#1 AAATAATTTATAAATCCGGAAACGAAAATCAG-GG-TGTGACAAATCTACCCCCCTTACA 96
consensus_6213#3 AAATAATTTATAAATCCTGAAACGAAAATCAG-GA-TGTGACAACCGGGC---------- 76
consensus_6213#2 GGGAGTCCAGCAACTCCCAAAACAAGAAAAAG-AAACCCAACACTCCTTCCACTCAGGCT 62
consensus_6213#0 GGAAATATTGCCAACATTAATAGGGAATTTGTCAATTCTAACATCTCTTCTACTCT--CC 1378
* * * * *** *
consensus_6213#1 AAGAATCTCGTCC-CGAGATTC--GGAACGGCTAGAAAG-AAAAAGGCATAGGTAAACTG 152
consensus_6213#3 -AGAATC---CGC-TAAGGCC------ACAGGCAGATA---ATTCGACATGGCTTTGCTG 122
consensus_6213#2 TCTAATGGTGCCCATAAGGGC-----AAAGCTCAGGTTCCAGCAGGACAAAATTCTGCTG 117
consensus_6213#0 AATAATGAC-CTGACAGGGCCTATGCCACCTTTCCATTGGAATTTGGGTAGTTTGAAGCA 1437
*** * * * *
consensus_6213#1 CAGTCTATCTTA-----TTCCATAACTCCGATAATTATTC-TAAGGCTTTAAAGAAAACT 206
consensus_6213#3 -------TCTCC-----TCCTGCTGCGCGGATTGCGAGAC-CATAG----ACGGTGAGCC 165
consensus_6213#2 GTAAGTTCCTTTGCAAGTTTTGCAAGGCAGAAGGTCATGCACAGAGGGACTGTGAAGGCT 177
consensus_6213#0 CCTCAGCCTTGAGAACAACCGATTCTCGGGATGGCTATCTCCATTGCTGTCGAACAGCAG 1497
* ** * * *
consensus_6213#1 ACTGCTTCTTTGAAACTGGGGGCTGAGCTGTAACACTTGAAGACAC-AACCGGCACTGCA 265
consensus_6213#3 AAGACTC----AGGGTTGGTGGT---GCCGTCATACTTCTCGATTCCAGTCGGCTTAAAG 218
consensus_6213#2 TTCGGGCTTGGCTTGCTAAGAAAGGGATTCCTTTCCATGAGGACGCTAAGAAAGGGGGAG 237
consensus_6213#0 TAATCTCAAGACACTCAATGTGAGAAACAACCATCTATCAGGAATCATCCCGGATGGCCT 1557
* ** *
consensus_6213#1 TT-GGCTCCT-GTGAGGACAATGTTGTTGAC-TTGGCCTTG-GGGCTGTTGACG--CTTC 319
consensus_6213#3 CC-GGCT--------GGCCAATCCACTCGAT-GCAGATC----ATTTGTGAAGG--CAGC 262
consensus_6213#2 CG-GATCCTAAGAGTGGCTGATGGAGCTGAAATTAAAGTGA-TGGCCGTTGGGGAGCTTC 295
consensus_6213#0 CCTGAGCTTCCAACAGCTTGGTGTGATCCTCCTTGGAGGGAATGATTTTCATGGTCCAAT 1617
* * * * * *
consensus_6213#1 GGCTTCGGACAC-TCTTTTACGAAGGGACCTGG---CTCATAACAATTGAAACACACC-C 374
consensus_6213#3 AACTCCGTCCATATCGTCGTCGTAGCGATCTGG---TGAATGATGGGNGAGTATGGCC-T 318
consensus_6213#2 ATCTTCGACTTCCAAGCGGCAATAATCTTTTAC---TTCATGATGTTCTTTATGCTCC-C 351
consensus_6213#0 ACCATTGGACCT-TTGCTTCAACAACTATCTCCACTTTGTTGATCTCTCCAACAATCAAT 1676
* * * * * * *
consensus_6213#1 GCTGCTCCCTTCCATTA--CTGGTATCTTCTTGA-GATTG-AT------CCTGCTGAACT 424
consensus_6213#3 CTTGCTGCGCGGCGCTGG-TTGATGGTGTCGCGAAGATCG-ACGGGGCGCCTTCGATGTG 376
consensus_6213#2 TCTGTTAAGAGGAACC---TTATTTCTGTAATGG-TTTTA-ACGAA-CAGTGGTTATGT- 404
consensus_6213#0 TCTCTGGGGAGATACCAAATTGCTTCTACAATGATTTCTGGACAGATTTGCCAATGTACT 1736
* * * * *
consensus_6213#1 --GGCACCGACTGATTAGCTTGC-------TCGATATTAACTTCATTGCTTTCAT----- 470
consensus_6213#3 --GGGAGTGTGNGGTCGTTCAAC-------TCGACGCTCCCTATGTCG-TTCGGG----- 421
consensus_6213#2 --GTCACACCCTGATTTTCGTGT-------TAGGATTTA--TAAATTA-TTTAAT----- 447
consensus_6213#0 TCAACGATGACCCATTCTCAGGCAATATCACAGAGCGCATGTCTGTCGACTTCACGACGA 1796
* * * * *
consensus_6213#1 TAGCCTCTGATTTGATCT-CACCAGCGATGCTCAACTG-TTGCGACTGTTCTTGACCAGC 528
consensus_6213#3 AGGCGAGCGGACAGATCG-CTCACCATGTCCCCTGCTC-CTGCGACTAGGTCCGGCAC-- 477
consensus_6213#2 AAATTATTAATAGAATTTATATGAAATGTTCATTAAT--TTACAAGTGAAGTTAAAAA-- 503
consensus_6213#0 AAGGCGAGAACCTTACCTACATGGGAGAGCCTCTAGTGCTCATGACGGGCATTGATCTGT 1856
* * * *
consensus_6213#1 GGAAGAAGATTCACCAATTTGGAGGGACTTAATACGCTGGGTTTGGGTACTACCTTGTGG 588
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CCATGAATCAATTGTCAGGCGCCATCCCTCCGCCATTAGGTTTCCTGAGGCAGCTCAAGT 1916
consensus_6213#1 CTCCTAGAAAGACATCCTTCCTGTCTTACGAGTGTCCGCTCCTGTTTTGCTTGGCCTCCA 648
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 CTCTAAACTTATCACATAACCAACTTGTTGGCCCGATACCAGAGACATTCATGTATATGC 1976
consensus_6213#1 GGCGGAATGGCTTTGGCAACCAACTTCCGGAAGATCC----------------------- 685
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 AGGATATGGAGAGCCTTGACCTCTCATACAACCACCTCAATGGCAGCCTGCCTATGCAGC 2036
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TGGCAAATCTCTCCTTCCTGTGCTCGTTCAATGTCGCCTACAACAACCTCTCTGGTGAGA 2096
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TACCCTTCCAACAACAGCTTGGGACATTCGATGAATCGGCATTCGAGGGGAATGACAATC 2156
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TCTGTGGTGGAATCATCAACAAAAACTGCTCATCAGTGCTGCATCAGAATCAAGGAGTGT 2216
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 TCGACGCCATTGACACGTCACTTGTTTTCTGGTCCTACGTTTTTGGGTGTTTTGCACTTG 2276
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 GATTTTGGGGCACCGTGGCATTGCTGATATGGGATGAAGTGTGCAGGAGGAGACTGTGTG 2336
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 ACTTGATGGATGCTCTAATGTTTAAGCTGGGTTGGGAATTTGTGCCTTGAATCCTGATAT 2396
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 GTCTAGCTAAGAGTCTAGGAGACATGGAAAGACAGAGCAATCCCTTCTTTTTTTTTGCAC 2456
consensus_6213#1 ------------------------------------------------------------
consensus_6213#3 ------------------------------------------------------------
consensus_6213#2 ------------------------------------------------------------
consensus_6213#0 GAGATGCACATGCTGTCACATCCTGATTTTCGTTTCAGGATTTATAAATTATTTAATAAA 2516
consensus_6213#1 ------------------
consensus_6213#3 ------------------
consensus_6213#2 ------------------
consensus_6213#0 TTAATAATAGAATTTATA 2534
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||