cluster # 622

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Oryza sativa
cluster # 622 cluster # 622 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_622#0 length = 596 sequences # 2

consensusID : consensus_622#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 596
fasta sequence

                              [AGGGAAAAATCTCAGCAAATTTTGGTAGTGTTAATTTTGTGGGGTATCATACTTAAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGCAGATAAATGAGGAGAGAGAAGGTCAACAGGCTACATANNTTGNATCCAGCTATAGCACGGACTCCAATACACAATGTGTGTATGACATGTGGGACCAGATATTAATAGTGTAGTATGTAACTATTGTATAAATGAGCTATTAGATTGGCTATAATGAATTAAAGCTAGTAATTGACAATACTATACTTGCTCAAAGAAAGATACTGCGTACTTTCTCCCCATAGAAATTTCTTCCGGCCCATTAGGGATAGGCTCGTGCAGTGATGTCGGCCGCCAAGCGATTGCCGGCTGCTGCGGGCATAGGTGTATGCTTTACAGATCGATGCCAATTGAGCTCACGTCCAAGGTTCTGCACCGTTCAACAAGCGTCGAACTGGTACTTGGCATGGCTAAGTTGCATGGTCAAATAACGTTAGTGTTCTCTTCCAATTTGCTTCCATCGTCTCGCATTTGAAACCTAAATAAATGGTAAACTTTATATTTCTGCCACT]

[+] EMBL CF304099             [AGGGAAAAATCTCAGCAAATTTTGGTAGTGTTAATTTTGTGGGGTATCATACTTAAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGCAGATAAATGAGGAGAGAGAAGGTCAACAGGCTACATANNTTGNATCCAGCTATAGCACGGACTCCAATACACAATGTGTGTATGACATGTGGGACCAGATATTAATAGTGTAGTATGTAACTATTGTATAAATGAGCTATTAGATTGGCTATAATGAATTAAAGCTAGTAATTGACAATACTATACTTGCTCAAAGAAAGATACTGCGTACTTTCTCCCCATAGAAATTTCTTCCGGCCCATT                                                                                                                                                                                                                                                        ]
[+] EMBL CF303444             [    AAAAATCTCAGCAAATTTTGGTAGTGTTAATTTTGTGGGGTATCATACTTAAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGCAGATAAATGAGGAGAGAGAAGGTCAACAGGCTACAGA TTTGTAGCCAGCTATAGCACGGACTCCAATACACAATGTGTGTATGACATGTGGGACCAGATATTAATAGTGTAGTATGTAACTATTGTATAAATGAGCTATTAGATTGGCTATAATGAATTAAAGCTAGTAATTGACAATACTATACTTGCTCAAAGAAAGATACTGTGTACTTTTTCCCCATAGAAATTTCTTCCGGCCCATTAGGGATAGGCTCGTGCAGTGATGTCGGCCGCCAAGCGATTGCCGGCTGCTGCGGGCATAGGTGTATGCTTTACAGATCGATGCCAATTGAGCTCACGTCCAAGGTTCTGCACCGTTCAACAAGCGTCGAACTGGTACTTGGCATGGCTAAGTTGCATGGTCAAATAACGTTAGTGTTCTCTTCCAATTTGCTTCCATCGTCTCGCATTTGAAACCTAAATAAATGGTAAACTTTATATTTCTGCCACT]




>consensus_622#0
AGGGAAAAATCTCAGCAAATTTTGGTAGTGTTAATTTTGTGGGGTATCATACTTAAGAGC
AGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGCAGATAAATGAGGAGA
GAGAAGGTCAACAGGCTACATANNTTGNATCCAGCTATAGCACGGACTCCAATACACAAT
GTGTGTATGACATGTGGGACCAGATATTAATAGTGTAGTATGTAACTATTGTATAAATGA
GCTATTAGATTGGCTATAATGAATTAAAGCTAGTAATTGACAATACTATACTTGCTCAAA
GAAAGATACTGCGTACTTTCTCCCCATAGAAATTTCTTCCGGCCCATTAGGGATAGGCTC
GTGCAGTGATGTCGGCCGCCAAGCGATTGCCGGCTGCTGCGGGCATAGGTGTATGCTTTA
CAGATCGATGCCAATTGAGCTCACGTCCAAGGTTCTGCACCGTTCAACAAGCGTCGAACT
GGTACTTGGCATGGCTAAGTTGCATGGTCAAATAACGTTAGTGTTCTCTTCCAATTTGCT
TCCATCGTCTCGCATTTGAAACCTAAATAAATGGTAAACTTTATATTTCTGCCACT

clustalw multiple alignements is not computed in this case