These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2337 fasta sequence [ACTGCTGCACTCGCGGAGGCGACCCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGCGCGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTGCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGGGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTCGGGCCCCGGCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCCGGCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGACACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCCAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG-A-GCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAAAAAAGTTGGGAAAAAA] [+] EMBL AK121985 [ACTGCTGCACTCGCGGAGGCGACCCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGCGCGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTGCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGGGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTCGGGCCCCGGCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCCGGCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGACACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCCAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGAGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG AGGCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTT ] [+] EMBL AK100702 [ ACTCGCGGAGGCGA CCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGC CGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTCCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGCGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTC GGCCCC GCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCC GCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGATACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCGAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG A GCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAA ] [+] EMBL C71975 [ CCGCGGGCTAC CNCNATCNTNTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCNGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTNATGGTGCGCGCCGTTCAANACGTGGCAGCGCGTCTACNACTACNACATNCTGCACGGGCTGACCGACGACGAGGCGCANTGGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTTGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTA ] [+] EMBL AU101072 [ AGGCACCGGATGGTCGNA GCGCGGNATCCGCGCAGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCG TTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAAAAAAGTTGGGAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||