cluster # 6225

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6225 cluster # 6225 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6225#0 length = 650 sequences # 4

consensusID : consensus_6225#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 650
fasta sequence

                              [AGTCGGGGGCATTCCCCCACACCCTTGACGAGCGAGCCTTGCCCTCTTCTCTTCCCTTCTCTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGGAGTCGTCGCGGCGGCGAGGGCGAATCGGTAACCCCCCCCCCTCCGGAGTTCCGGGATGGGGACGCCGGAGTTCCCCAACCTGGGCAAGCACTGCAGCGTCGGCGACTGCAACCAGATCGACTTCCTGCCCTTCACCTGCGACCGCTGCGACCACGTCTTTTGCCTTCAGCACCGAAGTTATACATCGCATCAGTGTCCAAATGCAAATCAGAAGGATGTGAC-TGTCCTCATC-TGCCCACTCTGTGCTAAAGGAGTT-CGCCTGAACCCGAACGAAGATCCAAACATCACCTGGGACACCCATGTCAATAGTGACTGTGATCCATCAAATTACCAGAAAGTAACAAAGAAAAAGAAATGCCCAGTGCCTGNGTGCAGAGAGACACTGACATTTTCAAACACAATTAGATGCAAAGATTGCACCAAAGAACACTGCCTGAAGCATAGATTTGGACCTGATCACAAGTGTCCAGGGCCAAGAAACCGGAATCTACATTCCCCTTCGGGAATATGCTTAGGAGAAGTCAGAAAGCAGAATCATGTT]

[+] EMBL CF309834             [AGTCGGGGGCATTCCCCCACACCCTTGACGAGCGAGCCTTGCCCTCTTCTCTTCCCTCCTCTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGGAGTCGTCGCGGCGGCGAGGGCGAATCGGTAACCCCCCCCCCTCCGGAGTTCCGGGATGGGGACGCCGGAGTTCCCCAACCTGGGCAAGCACTGCAGCGTCGGCGACTGCAACCAGATCGACTTCCTGCCCTTCACCTGCGACCGCTGCGACCACGTCTTTTGCCTTCAGCACCGAAGTTATACATCGCATCAGTGTCCAAATGCAAATCAGAAGGATGTGAC TGTCCTCATC TGCCCACTCTGTGCTAAAGGAGTT CGCCTGAACCCGAACGAAGATCCAAACATCACCTGGGACACCCATGTCAATAGTGACTGTGATCCATCAAATTACCAGAAAGTAACAAAGAAAAAGAAATGCCCAGTGCCTGNGTGCAGAGAGACACTGACATTTTCAAACACAATTAGATGCAAAGATTGCACCAAAGAACACTGCCTGAAGCATAGATTTGGACCTGATCACA                                                                                ]
[+] EMBL OSS11832A            [                                                 TCTTCCCTTCTCTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGGAGTCGTCGCGGCGGCGAGGGCGAATCGGTAACCCCCCCCCCTCCGGAGTTCCGGGATGGGGACGCCGGAGTTCCCCAACCTGGGCAAGCACTGCAGCGTCGGCGACTGCAACCAGATCGACTTCCTGCCCTTCACCTGCGACCGCTGCGACCACGTCTTTTGCCTTCAGCACCGAAGTTATACATCGCATCAGTGTCCAAATGCAAATNAGAAGGATGTGACTTGTCCTCATCTTGCCCACTCTGTGCTAAAGGAGTTNGGCTTGAACC                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS11984A            [                                                 TCTTCCCTTCTCTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGNAGTCGTCGCGGCGGCGAGGGCGAATCGGTAACCCCCCCCCNTCCGGAGTTCCGGGATGGGGACGCCGGAGTTCCCCAACCTGGGNAAGCACTGCAGCGTCGGCGACTGAAACCAGATCGATTTCCTGCCCTTAACCTGCGACCGNTGCGACCACGTNTTTTGCCTTNAGNACCGAAGTTATACATCGCATCAGTNTCCAAATGCAAATCAGAAGGATGTGAC TGTCCTNATC TGCCCACTNTGTGCTAAAGGAGTT NGCCTGAAC                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA755298             [                                                           TCTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGGAGTCGTCGCGGCGGCGAGGGCGAATCGGTAACCCCCCCCCCTCCGGAGTTCCGGGATGGGGACGCCGGAGTTCCCCAACCTGGGCAAGCACTGCAGCGTCGGCGACTGCAACCAGATCGACTTCCTGCCCTTCACCTGCGACCGCTGCGACCACGTCTTTTGCCTTCAGCACCGAAGTTATACATCGCATCAGTGTCCAAATGCAAATCAGAAGGATGTGAC TGTCCTCATC TGCCCACTCTGTGCTAAAGGAGTT CGCCTGAACCCGAACGAAGATCCAAACATCACCTGGGACACCCATGTCAATAGTGACTGTGATCCATCAAATTACCAGAAAGTAACAAAGAAAAAGAAATGCCCAGTGCCTGGGTGCAGAGAGACACTGACATTTTCAAACACAATTAGATGCANAGATTGCACCANAGAACACTGCCTGGAGCATAGATTTGGACCTGATCACAAGTGTCCAGGGCCAAGAAACCGGAATCTACATTCCCCTTCGGGAATATGCTTAGGAGAAGTCAGAAAGCAGAATCATGTT]




>consensus_6225#0
AGTCGGGGGCATTCCCCCACACCCTTGACGAGCGAGCCTTGCCCTCTTCTCTTCCCTTCT
CTCCTACCGGCGGCAACTACCGGGAAGCCGCCGCCGACCGCCGGAGCGGAGTCGTCGCGG
CGGCGAGGGCGAATCGGTAACCCCCCCCCCTCCGGAGTTCCGGGATGGGGACGCCGGAGT
TCCCCAACCTGGGCAAGCACTGCAGCGTCGGCGACTGCAACCAGATCGACTTCCTGCCCT
TCACCTGCGACCGCTGCGACCACGTCTTTTGCCTTCAGCACCGAAGTTATACATCGCATC
AGTGTCCAAATGCAAATCAGAAGGATGTGACTGTCCTCATCTGCCCACTCTGTGCTAAAG
GAGTTCGCCTGAACCCGAACGAAGATCCAAACATCACCTGGGACACCCATGTCAATAGTG
ACTGTGATCCATCAAATTACCAGAAAGTAACAAAGAAAAAGAAATGCCCAGTGCCTGNGT
GCAGAGAGACACTGACATTTTCAAACACAATTAGATGCAAAGATTGCACCAAAGAACACT
GCCTGAAGCATAGATTTGGACCTGATCACAAGTGTCCAGGGCCAAGAAACCGGAATCTAC
ATTCCCCTTCGGGAATATGCTTAGGAGAAGTCAGAAAGCAGAATCATGTT

clustalw multiple alignements is not computed in this case