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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6242 cluster # 6242       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6242#0 length = 835 sequences # 4  

consensusID : consensus_6242#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 835
fasta sequence
                              [ACACAAAGTAAATGAACAAGTTACCTCACAAGCTAGCCAGCTTGCTGATGCCCTTTCCAGCCTAAAGGTATTGGAAGATGAATTGAGTAATTCAAAGGAGTATATCTCTTCTATTTCTGAAGAAAAGCGGCAGATGCAATTGCATACTGCTGCTGTAGAAGAGGAGTTGGAGAAAACAAATGAGGAACTGGCTATTTATGCCAGCAAATTCGAAGATGCCAATGTAACGATTAACTCACTACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGAAGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCCAAATGTTTGGAAGAGTTGGACAGAAGTCATGGAAACTTACAAAGTCATTCAACTGAACATGATGTTTACCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTCTTATCATTAATGACTGAAGAATTTGGAAAGAAGGTCAGTACCTTGAGAGAAATGGCCCTTATTGTGAGGAGTATGCGTGAACAGCTTGCTGCAAAGGGTTTTCAGATTGACCCAACAATGGAGGATTCAGAATCGGGAATGCTTCTCTCTTTCCCAGACTACGATAACTTTGTTACTGAAAGAATGGCAAGCAGCAAAATCAGAAAAAGGAATGTTGATGGTGCTTTGTCCTTCTCTACTGTTGTTGAACAGTTGAGCAACCAAGCTGAATACCTGTCTGAGATTGTTAAGACTTGTCAGGTTACATGGATGAAAATATCACGCTGGCTCATCACTCTTTGCAGTTGGCAAGTAGCACAGTTGCTCATACTCTAG]

[+] EMBL CB671406             [ACACAAAGTAAATGAACAAGTTACCTCACAAGCTAGCCAGCTTGCTGATGCCCTTTCCAGCCTAAAGGTATTGGAAGATGAATTGAGTAATTCAAAGGAGTATATCTCTTCTATTTCTGAAGAAAAGCGGCAGATGCAATTGCATACTGCTGCTGTAGAAGAGGAGTTGGAGAAAACAAATGAGGAACTGGCTATTTATGCCAGCAAATTCGAAGATGCCAATGTAACGATTAACTCACTACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGAAGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCCAAATGTTTGGAAGAGTTGGACAGAAGTCATGGAAACTTACAAAGTCATTCAACTGAACATGATGTTTACCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTCTTATCATTAATGACTGAAGAATTTGGAAAGAAGGTCAGTACCTTGAGAGAAATGGCCCTTATTGTGAGGAGTATGCGTGAACAGCTTGCTGCAAAGGGTTTTCAGATTGACCCAACAATGGAGGATTCAGAATCGGGAATGCTTCTCTCTTTCCCAGACTACGATAACTTTGTTACTGAAAGAATGGCAAGCAGCAAAATCAGAAAAAGGAATGTTGATGGTGCTTTGTCCTTCTCTACTGTTGTTGAACAGTTGAGCAACCAAGCTGAATACCTGTCTGAGATTGTTAAGACTTGTCAGGTTACATGGATGAAAATATCACGCTGGCTCATCACTCTTTGCAGTTGGCAAGTAGCACAGTTGCTCATACTCTAG]
[+] EMBL CF307035             [                                                                                                 GAGTATATCTCTTCTATTTCTGAAGAAAAGCGGCAGATGCAATTGCATACTGCTGCTGTAGAAGAGGAGTTGGAGAAAACAAATGAGGAACTGGCTATTTATGCCAGCAAATTCGAAGATGCCAATGTAACGATTAACTCACTACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGAAGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCCAAATGTTTGGAAGAGTTGGACAGAAGTCATGGAAACTTACAAAGTCATTCAACTGAACATGATGTTTACCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTCTTATCATTAATGACTGAAGAATTTGGAAAGAAGGTCAGTACCTTGAGAGAAATGGCCCTTATTGTGAGGAGTATGCGTGAACAGCTTGCTGCAAAGGGTTTTCAGATTG                                                                                                                                                                                                                                                                          ]
[-] EMBL BQ597347             [                                                                                                                                                                                                                              TGTAACGATTAACTCACTACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGAAGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCC AATGTTTGGAAGAGTTGGACAGAAGTCATGGAAACTTAC AAGTCATTCAACTGAACATGATGTTTACCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTC                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB238423             [                                                                                                                                                                                                                              TGTAACGATTAACTCACTACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGAAGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCC AATGTTTGGAAGAGTTGGACAGAAGTCATGGAAACTTAC AAGTCATTCAACTGAACATGATGTTTACCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTC                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_6242#0 ACACAAAGTAAATGAACAAGTTACCTCACAAGCTAGCCAGCTTGCTGATGCCCTTTCCAG CCTAAAGGTATTGGAAGATGAATTGAGTAATTCAAAGGAGTATATCTCTTCTATTTCTGA AGAAAAGCGGCAGATGCAATTGCATACTGCTGCTGTAGAAGAGGAGTTGGAGAAAACAAA TGAGGAACTGGCTATTTATGCCAGCAAATTCGAAGATGCCAATGTAACGATTAACTCACT ACAAGATGCATTGTCACAGGCTAGAGTGAATATTTCTGTTCTTGATGCTGAAAAGAAGGA AGCTGATGCCAAGCATGAAACAGAAACTAGTGCTCTTAATGCTAAGCTTGCCAAATGTTT GGAAGAGTTGGACAGAAGTCATGGAAACTTACAAAGTCATTCAACTGAACATGATGTTTA CCTTGAGAAACTTAGTACACTTGTAATGGATAACAGCCTCTTATCATTAATGACTGAAGA ATTTGGAAAGAAGGTCAGTACCTTGAGAGAAATGGCCCTTATTGTGAGGAGTATGCGTGA ACAGCTTGCTGCAAAGGGTTTTCAGATTGACCCAACAATGGAGGATTCAGAATCGGGAAT GCTTCTCTCTTTCCCAGACTACGATAACTTTGTTACTGAAAGAATGGCAAGCAGCAAAAT CAGAAAAAGGAATGTTGATGGTGCTTTGTCCTTCTCTACTGTTGTTGAACAGTTGAGCAA CCAAGCTGAATACCTGTCTGAGATTGTTAAGACTTGTCAGGTTACATGGATGAAAATATC ACGCTGGCTCATCACTCTTTGCAGTTGGCAAGTAGCACAGTTGCTCATACTCTAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)