cluster # 6251

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Oryza sativa
cluster # 6251 cluster # 6251 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6251#0 length = 1484 sequences # 4
consensusID : consensus_6251#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1484
fasta sequence
                              [CAACACGCTGCTGCAGTCGCTGTTCGGGACGCGCCTGCCCACGGTGATCGGCGGATCCTACGCGTTCGTGGTCCCGATAATGGCCATCATACAGGACTCATCGCTCGCCGCCATACCCGACGACCACGAGAGGTTCCTTCAGACCATGAGGGCGATACAGGGGGCACTCATCGTGTCCTCCAGCATTCAGATCATCCTCGGCTACAGCCAGCTGTGGGGCATTTTCTCCAGATTCTTCAGCCCGTTGGGGATGGCGCCAGTGGTTGCATTGCTCGGGTTTGGCCTTTTCGAAAGAGGATTCCCTGTGGTTGGGAGATGCGTTGAGGTTGGACTTCCAATGTTAATTCTGTTTGTCGTGCTTTCTCAGTATCTGAAGAATGTACAGATAAGAGATATTCCAATACTGGAGAGGTTCTCCCTGTTCATCTGCATCGCGTTGGTTTGGGCCTATGCTCAAATCCTCACTGCAGGTGGCGCGTATAAGCATAGCCCTGAGGTCACTCAGATCAACTGCCGCACTGACCGTGCCAATCTCATCTCTTCCGCGCCATGGATTAAGATCCCTTTTCCACTACAATGGGGCGCACCAACTTTCAGTGCCGGTCAATCCTTTGGTATGGTATCTGCTGTTCTGGTATCGCTAGTAGAGTCCACGGCTTCTTACAAAGCTGCGGCTCGGCTTGCAAGTGCTACTCCACCTCCAGCACATATCCTCAGTAGAGGCATTGGGTGGCAGGGAATTGGTATCCTTCTTGATGGGCTATTTGGAACGGGTACTGGCTCCACCGTGTCAGTGGAGAATGTCGGGTTGTTAGGATCAACGAGGATCGGGAGCCGACGAGTTATACAGATCTCTGCCGGCTTCATGATCTTCTTCTCCATGCTAGGAAAATTTGGAGCATTGTTTGCTTCCATCCCATTTACCATCTTTGCGGCCGTGTACTGCGTCTTGTTTGGACTAGTTGCGGCAGTGGGGCTCTCCTTCTTGCAGTTTACTAACATGAACTCCATGCGCAACCTCTTTATCGTCGGTGTCTCCATCTTTCTTGGCCTATCTGTGCCCGAATACTTTTTCCGGTACAGCATGGCCGCTCAGCGTGGCCCTGCGCACACAAAAGCTGGATGGTTCAACGACTACATCAACACTATCTTCTCATCTCCTCCGACGGTCGGACTGATCGTGGCCGTCTTCCTGGACAACACGCTGGAGGTGAAAAACGCGGCCAAGGACCGGGGGATGCCATGGTGGGTACCGTTCCGGTCGTTCAAGGGGGACGCCAGGAGCGAGGAGTTCTACAGCCTGCCCTTCAACCTCAACCGCTTCTTCCCTCCGTCTTAAAACCAGCACGGGGAGAAGTTTGAGGGAAACGGGGATTTCGTCGCTGATGCGCGATCGAATCGTTTGTGTCTGTGTCAGAAAGAACTCAGAATGCTGAGCAGAGGCAATGTAGATGTTCTTCTAGTTGGCCCTTAAAAAAAAAAAA]

[+] EMBL AK103020             [CAACACGCTGCTGCAGTCGCTGTTCGGGACGCGCCTGCCCACGGTGATCGGCGGATCCTACGCGTTCGTGGTCCCGATAATGGCCATCATACAGGACTCATCGCTCGCCGCCATACCCGACGACCACGAGAGGTTCCTTCAGACCATGAGGGCGATACAGGGGGCACTCATCGTGTCCTCCAGCATTCAGATCATCCTCGGCTACAGCCAGCTGTGGGGCATTTTCTCCAGATTCTTCAGCCCGTTGGGGATGGCGCCAGTGGTTGCATTGCTCGGGTTTGGCCTTTTCGAAAGAGGATTCCCTGTGGTTGGGAGATGCGTTGAGGTTGGACTTCCAATGTTAATTCTGTTTGTCGTGCTTTCTCAGTATCTGAAGAATGTACAGATAAGAGATATTCCAATACTGGAGAGGTTCTCCCTGTTCATCTGCATCGCGTTGGTTTGGGCCTATGCTCAAATCCTCACTGCAGGTGGCGCGTATAAGCATAGCCCTGAGGTCACTCAGATCAACTGCCGCACTGACCGTGCCAATCTCATCTCTTCCGCGCCATGGATTAAGATCCCTTTTCCACTACAATGGGGCGCACCAACTTTCAGTGCCGGTCAATCCTTTGGTATGGTATCTGCTGTTCTGGTATCGCTAGTAGAGTCCACGGCTTCTTACAAAGCTGCGGCTCGGCTTGCAAGTGCTACTCCACCTCCAGCACATATCCTCAGTAGAGGCATTGGGTGGCAGGGAATTGGTATCCTTCTTGATGGGCTATTTGGAACGGGTACTGGCTCCACCGTGTCAGTGGAGAATGTCGGGTTGTTAGGATCAACGAGGATCGGGAGCCGACGAGTTATACAGATCTCTGCCGGCTTCATGATCTTCTTCTCCATGCTAGGAAAATTTGGAGCATTGTTTGCTTCCATCCCATTTACCATCTTTGCGGCCGTGTACTGCGTCTTGTTTGGACTAGTTGCGGCAGTGGGGCTCTCCTTCTTGCAGTTTACTAACATGAACTCCATGCGCAACCTCTTTATCGTCGGTGTCTCCATCTTTCTTGGCCTATCTGTGCCCGAATACTTTTTCCGGTACAGCATGGCCGCTCAGCGTGGCCCTGCGCACACAAAAGCTGGATGGTTCAACGACTACATCAACACTATCTTCTCATCGCCTCCGACGGTCGGACTGATCGTGGCCGTCTTCCTGGACAACACGCTGGAGGTGAAAAACGCGGCCAAGGACCGGGGGATGCCATGGTGGGTACCGTTCCGGTCGTTCAAGGGGGACGCCAGGAGCGAGGAGTTCTACAGCCTGCCCTTCAACCTCAACCGCTTCTTCCCTCCGTCTTAAAACCAGCACGGGGAGAAGTTTGAGGGAAACGGGGATTTCGTCGCTGATGCGCGATCGAATCGTTTGTGTCTGTGTCAGAAAGAACTCAGAATGCTGAGCAGAGGCAATGTAGATGTTCTTCTA                      ]
[+] EMBL CF322619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAAGATCCCTTTTCCACTACAATGGGGCGCACCAACTTTCAGTGCCGGTCAATCCTTTGGTATGGTATCTGCTGTTCTGGTATCGCTAGTAGAGTCCACGGCTTCTTACAAAGCTGCGGCTCGGCTTGCAAGTGCTACTCCACCTCCAGCACATATCCTCAGTAGAGGCATTGGGTGGCAGGGAATTGGTATCCTTCTTGATGGGCTATTTGGAACGGGTACTGGCTCCACCGTGTCAGTGGAGAATGTCGGGTTGTTAGGATCAACGAGGATCGGGAGCCGACGAGTTATACAGATCTCTGCCGGCTTCATGATCTTCTTCTCCATGCTAGGAAAATTTGGAGCATTGTTTGCTTCCATCCCATTTACCATCTTTGCGGCCGTGTACTGCGTCTTGTTTGGACTAGTTGCGGCAGTGGGGCTCTCCTTCTTGCAGTTTACTAACATGAACTCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CA763027             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGTTAGGATCAACGAGGATCGGGAGCCGACGAGTTATACAGATCTCTGCCGGCTTCATGATCTTTTTCTCCGTGCTAGGAAAATTTGGAGCATTGTTTGCTTCCATCCCATTTACCATCTTTGCGGCCGTGTACTGCGTCTTGTTTGGACTAGTTGCGGCAGTGGGGCTCTCCTTCTTGCAGTTTACTAACATGAACTCCATGCGCAACCTCTTTATNGTCGGTGTCTCCATCTTTCTTGGCCTATCTGTGCCCGAATACTTTTTCCGGTACAGCATGGCCGCTCAGCGTGGCCCTGCGCACACAAAAGCTGGATGGTTCAACGACTACATCAACACTATCTTCTCATCTCCTCCGACGGTCGGACTGATCGTGGCCGTCTTCCTGGACAACACGCTGGAGGTGAAAAACGCGGCCAAGGACCGGGGGATGCTATGGTGGGTACCGTTCCGGTCGTTCAAGGGGGACGCCAGGAGCGAGGAGTTCTACAGCCTGCCCTTCAACCTCAACCGCTTCTTCCCTCCGTCTTAAAACCAGCACGGGGAGAAGATTGAGGGAAACGGGGATTTCGTCGCTGATGCGCGATCGAATCGTTTGTGTCTGTGTCAGAAAGAACTCAGAATGCTGAGCAGAGGCAATGTAGATGTTTTTCTAGTTGGCCCTTAAAAAAAAAAAA]
[+] EMBL BI804968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          catGGGCTCTCCTTCTT CAGTTTACTAACATGAACTCCATGC CAACCTCTTTATCGTCGGTGTCTCCATCTTTCTTGGCCTATCTGTGCCCGAATACTTTTTCCGGTACAGCAT GCCGCTCAGCGTGGCCCTGCGCACAC AAAGCTGGATGGTTCAACGACTACATCAACACTATCTTCTCATCTCCTCCGACGGTCGGACTGATCGTGGCCGTCTTCCTGGACAACACGCTGGAGGTGAAAAACGCGGCCAAGGACCGGGGGAT CCATGGTGGGTACCGTTCCGGTCGTTCAAGGGGGACGCCAGGAGCGAGGAGTTCTACAGCCTGCCCTTCAACCTCAACCGCTTCTTCCCTCCGTCTTAAAACCAGCACGGGGAGAAGTTTGAGGGAAACGGGGATTTCGTCGCTGATGCGCGATCGAATCGTTTGTGTCTGTGTCAGAAAGAACTCAGAATGCTGAGCAGAGGC ATGTAGATGTTCTTCTAGTTGGCCATTATTTCAAAAA  ]




>consensus_6251#0
CAACACGCTGCTGCAGTCGCTGTTCGGGACGCGCCTGCCCACGGTGATCGGCGGATCCTA
CGCGTTCGTGGTCCCGATAATGGCCATCATACAGGACTCATCGCTCGCCGCCATACCCGA
CGACCACGAGAGGTTCCTTCAGACCATGAGGGCGATACAGGGGGCACTCATCGTGTCCTC
CAGCATTCAGATCATCCTCGGCTACAGCCAGCTGTGGGGCATTTTCTCCAGATTCTTCAG
CCCGTTGGGGATGGCGCCAGTGGTTGCATTGCTCGGGTTTGGCCTTTTCGAAAGAGGATT
CCCTGTGGTTGGGAGATGCGTTGAGGTTGGACTTCCAATGTTAATTCTGTTTGTCGTGCT
TTCTCAGTATCTGAAGAATGTACAGATAAGAGATATTCCAATACTGGAGAGGTTCTCCCT
GTTCATCTGCATCGCGTTGGTTTGGGCCTATGCTCAAATCCTCACTGCAGGTGGCGCGTA
TAAGCATAGCCCTGAGGTCACTCAGATCAACTGCCGCACTGACCGTGCCAATCTCATCTC
TTCCGCGCCATGGATTAAGATCCCTTTTCCACTACAATGGGGCGCACCAACTTTCAGTGC
CGGTCAATCCTTTGGTATGGTATCTGCTGTTCTGGTATCGCTAGTAGAGTCCACGGCTTC
TTACAAAGCTGCGGCTCGGCTTGCAAGTGCTACTCCACCTCCAGCACATATCCTCAGTAG
AGGCATTGGGTGGCAGGGAATTGGTATCCTTCTTGATGGGCTATTTGGAACGGGTACTGG
CTCCACCGTGTCAGTGGAGAATGTCGGGTTGTTAGGATCAACGAGGATCGGGAGCCGACG
AGTTATACAGATCTCTGCCGGCTTCATGATCTTCTTCTCCATGCTAGGAAAATTTGGAGC
ATTGTTTGCTTCCATCCCATTTACCATCTTTGCGGCCGTGTACTGCGTCTTGTTTGGACT
AGTTGCGGCAGTGGGGCTCTCCTTCTTGCAGTTTACTAACATGAACTCCATGCGCAACCT
CTTTATCGTCGGTGTCTCCATCTTTCTTGGCCTATCTGTGCCCGAATACTTTTTCCGGTA
CAGCATGGCCGCTCAGCGTGGCCCTGCGCACACAAAAGCTGGATGGTTCAACGACTACAT
CAACACTATCTTCTCATCTCCTCCGACGGTCGGACTGATCGTGGCCGTCTTCCTGGACAA
CACGCTGGAGGTGAAAAACGCGGCCAAGGACCGGGGGATGCCATGGTGGGTACCGTTCCG
GTCGTTCAAGGGGGACGCCAGGAGCGAGGAGTTCTACAGCCTGCCCTTCAACCTCAACCG
CTTCTTCCCTCCGTCTTAAAACCAGCACGGGGAGAAGTTTGAGGGAAACGGGGATTTCGT
CGCTGATGCGCGATCGAATCGTTTGTGTCTGTGTCAGAAAGAACTCAGAATGCTGAGCAG
AGGCAATGTAGATGTTCTTCTAGTTGGCCCTTAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case