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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6262 cluster # 6262       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6262#0 length = 1049 sequences # 4  

consensusID : consensus_6262#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1049
fasta sequence
                              [TTGAACCACCGGCATTGCCCAATGGAGATTTAAGAGTGAACGATTTAGACGCCAACCACTCTGATCACCTACACAAAACAAGCTTCAATCAGCCTTTGCTTAACCGGAAGGCAAAGTTGGATTCTTCCCGACAGGATTTGCCCATGAGAGGTTTCGTAGACAATATAAGTTCCCTTGAGTCATCATCTATTAGGCATTTTGATTCTTCCAAAGAAGAAAAGTATCACATGGATAAGAACTGGTGGGAGATGCAAGAAAGAGGAGATCAAGTTGCTTCAGTACTTGATATAGGGCAAGTTGGTCCAAGGGCAACTTGTCATTGTCAGGTAATTAGAAGTGTTGGTCAATGGTCAGCTGGAACCACTCAAATCGAAGGAAGCATCCACAATGCCTATTTTTCTCTTATTGAAAAGGCAGAACATTTTGTATATATCGAGAATCAATTTTTCATATCAGGCCTTTCAGGAGATGAAACGATAAAAAATCGTGTATTGGAAGCATTATACAGGCGCATACTTCGGGCAGAGAGAGAAAAAAAGCGCTTCAAAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGCATTGATGATGGCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAATACCGGACTATCTGTAGAGGCCCTAATTCTATACTTCAGAATCTATATGATGTTATTGGTCCAAAAGCACATGATTATATCTCATTTTATGGTCTTAGAGCACATGGTAGACTATGCGAAGGAGGTCCCTTGGTCACTAATCAGATTTATGTCCACAGTAAGTTGATGATAATTGATGACCGCATCACATTGATTGGATCAGCTAACATAAATGATAGAAGCTTGCTTGGATCAAGAGATTCTGAGATTGCCGTGGTCATTGAAATAAAGAAGTTGTTAGTTCCAAAATGAATGGAAAACCTTNGGGAAGCTGGGAAGTTTTCTCTAAGCCTACGTCTCTCTCTCTGGGCAGAGCACCTTGGCCTTCATCGAGGAGAGGTCAGCCATATTATGGACCCTATCGATGACTCA]

[+] EMBL CF305864             [TTGAACCACCGGCATTGCCCAATGGAGATTTAAGAGTGAACGATTTAGACGCCAACCACTCTGATCACCTACACAAAACAAGCTTCAATCAGCCTTTGCTTAACCGGAAGGCAAAGTTGGATTCTTCCCGACAGGATTTGCCCATGAGAGGTTTCGTAGACAATATAAGTTCCCTTGAGTCATCATCTATTAGGCATTTTGATTCTTCCAAAGAAGAAAAGTATCACATGGATAAGAACTGGTGGGAGATGCAAGAAAGAGGAGATCAAGTTGCTTCAGTACTTGATATAGGGCAAGTTGGTCCAAGGGCAACTTGTCATTGTCAGGTAATTAGAAGTGTTGGTCAATGGTCAGCTGGAACCACTCAAATCGAAGGAAGCATCCACAATGCCTATTTTTCTCTTATTGAAAAGGCAGAACATTTTGTATATATCGAGAATCAATTTTTCATATCAGGCCTTTCAGGAGATGAAACGATAAAAAATCGTGTATTGGAAGCATTATACAGGCGCATACTTCGGGCAGAGAGAGAAAAAAAGCGCTTCANAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGCATTGATGATGGCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BF430634             [                                                                                                                                                                                                             TTCCAAAGAAGAAAAGTATCACATGGATAAGAACTGGTGGGAGATGCAAGAAAGAGGAGATCAAGTTGCTTCAGTACTTGATATAGGGCAAGTTGGTCCAAGGGCAACTTGTCATTGTCAGGTAATTAGAAGTGTTGGTCAATGGTCAGCTGGAACCACTCAAATCGAAGGAAGCATCCACAATGCCTATTTTTCTCTTATTGAAAAGGCAGAACATTTTGTATATATCGAGAATCAATTTTTCATATCAGGCCTTTCAGGAGATGAAACGATAAAAAATCGTGTATTGGAAGCATTATACAGGCGCATACTTCGGGCAGAGAGAGAAAAAAAGCGCTTCAAAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGTATTGATGATGGCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAATACCGGACTATCTGTAGAGGCCCTAATTCTATACTTCAGAATCTATATGATGTTATTGGTCCAAAAGCACATGATTATATCTCATTTTATGGTCTTAGAGCACATGGTAGACTATGCGAAGGAGGTCCCTTGGTCACTAATCAGATTTATGTCCACAGTAAGTTGATGATAATTGATGACCGCATCACATTGATTGGATCAGCTAACATAAATGATAGAAGCTTGCTTGGATCAAGAGA                                                                                                                                                                            ]
[+] EMBL CF324398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGAGAAAAAAAGCGCTTCAAAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGCATTGATGATGGCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAATACCGGACTATCTGTAGAGGCCCTAATTCTATACTTCAGAATCTATATGATGTTATTGGTCCAAAAGCACATGATTATATCTCATTTTATGGTCTTAGAGCACATGGTAGACTATGCGAAGGAGGTCCCTTGGTCACTAATCAGATTTATGTCCACAGTAAGTTGATGATAATTGATGACCGCATCACATTGATTGGATCAGCTAACATAAATGATAGAAGCTTGCTTGGATCAAGAGATTCTGAGATTGCCGTGGTCATTGAAATAAAGAAGTTGTTAGTTCCAAAATGAATGGAAAACCTTNGGGAAGCTGGGAAGTTTTCTCTAAGCCTACGTCTCTCTCTCTGGGCAGAGCACCTTGGCCTTCATCGAGGAGAGGTCAGCCATATTATGGACCCTATCGATGACTCA]
[+] EMBL CF323146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGAGAAAAAAAGCGCTTCAAAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGCATTGATGATGGCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAATACCGGACTATCTGTAGAGGCCCTAATTCTATACTTCAGAATCTATATGA                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_6262#0 TTGAACCACCGGCATTGCCCAATGGAGATTTAAGAGTGAACGATTTAGACGCCAACCACT CTGATCACCTACACAAAACAAGCTTCAATCAGCCTTTGCTTAACCGGAAGGCAAAGTTGG ATTCTTCCCGACAGGATTTGCCCATGAGAGGTTTCGTAGACAATATAAGTTCCCTTGAGT CATCATCTATTAGGCATTTTGATTCTTCCAAAGAAGAAAAGTATCACATGGATAAGAACT GGTGGGAGATGCAAGAAAGAGGAGATCAAGTTGCTTCAGTACTTGATATAGGGCAAGTTG GTCCAAGGGCAACTTGTCATTGTCAGGTAATTAGAAGTGTTGGTCAATGGTCAGCTGGAA CCACTCAAATCGAAGGAAGCATCCACAATGCCTATTTTTCTCTTATTGAAAAGGCAGAAC ATTTTGTATATATCGAGAATCAATTTTTCATATCAGGCCTTTCAGGAGATGAAACGATAA AAAATCGTGTATTGGAAGCATTATACAGGCGCATACTTCGGGCAGAGAGAGAAAAAAAGC GCTTCAAAGCCATCATAATAATACCTCTGTTACCTGGTTTTCAGGGAGGCATTGATGATG GCGGAGCTGCATCTGTGAGAGCAATTATGCATTGGCAATACCGGACTATCTGTAGAGGCC CTAATTCTATACTTCAGAATCTATATGATGTTATTGGTCCAAAAGCACATGATTATATCT CATTTTATGGTCTTAGAGCACATGGTAGACTATGCGAAGGAGGTCCCTTGGTCACTAATC AGATTTATGTCCACAGTAAGTTGATGATAATTGATGACCGCATCACATTGATTGGATCAG CTAACATAAATGATAGAAGCTTGCTTGGATCAAGAGATTCTGAGATTGCCGTGGTCATTG AAATAAAGAAGTTGTTAGTTCCAAAATGAATGGAAAACCTTNGGGAAGCTGGGAAGTTTT CTCTAAGCCTACGTCTCTCTCTCTGGGCAGAGCACCTTGGCCTTCATCGAGGAGAGGTCA GCCATATTATGGACCCTATCGATGACTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)